RNA–Protein interactions for RNA: ENST00000619449.1

MALAT1-215, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 794 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-215ENST00000619449 CFAP74Q9C0B2 1584 aa28.55■■■□□ 2.16
MALAT1-215ENST00000619449 AKNAQ7Z591 1439 aa28.54■■■□□ 2.16
MALAT1-215ENST00000619449 SUPT6HQ7KZ85 1726 aaKnown RBP28.54■■■□□ 2.16
MALAT1-215ENST00000619449 NCOA2Q15596 1464 aa28.53■■■□□ 2.16
MALAT1-215ENST00000619449 ARHGAP5Q13017 1502 aa28.5■■■□□ 2.15
MALAT1-215ENST00000619449 EFCAB2Q5VUJ9 269 aa28.5■■■□□ 2.15
MALAT1-215ENST00000619449 APLP2Q06481 763 aa28.49■■■□□ 2.15
MALAT1-215ENST00000619449 CCNB3Q8WWL7 1395 aa28.49■■■□□ 2.15
MALAT1-215ENST00000619449 FRMPD1Q5SYB0 1578 aa28.44■■■□□ 2.14
MALAT1-215ENST00000619449 ADGRL1O94910 1474 aa28.43■■■□□ 2.14
MALAT1-215ENST00000619449 ITSN2Q9NZM3 1697 aa28.42■■■□□ 2.14
MALAT1-215ENST00000619449 SCAPERQ9BY12 1400 aa28.41■■■□□ 2.14
MALAT1-215ENST00000619449 RICTORQ6R327 1708 aa28.4■■■□□ 2.14
MALAT1-215ENST00000619449 DENND4BO75064 1496 aaPredicted RBP28.4■■■□□ 2.14
MALAT1-215ENST00000619449 SAMD9LQ8IVG5 1584 aa28.4■■■□□ 2.14
MALAT1-215ENST00000619449 ABCC1P33527 1531 aa28.39■■■□□ 2.14
MALAT1-215ENST00000619449 RAPGEF3O95398 923 aa28.39■■■□□ 2.14
MALAT1-215ENST00000619449 ARHGEF12Q9NZN5 1544 aa28.38■■■□□ 2.13
MALAT1-215ENST00000619449 CFDP1Q9UEE9 299 aaPredicted RBP28.38■■■□□ 2.13
MALAT1-215ENST00000619449 POGZQ7Z3K3 1410 aa28.36■■■□□ 2.13
MALAT1-215ENST00000619449 MYOM3Q5VTT5 1437 aa28.33■■■□□ 2.13
MALAT1-215ENST00000619449 KIAA1107Q9UPP5 1409 aa28.33■■■□□ 2.13
MALAT1-215ENST00000619449 ZMYM4Q5VZL5 1548 aa28.32■■■□□ 2.12
MALAT1-215ENST00000619449 ZNF644Q9H582 1327 aaPredicted RBP28.3■■■□□ 2.12
MALAT1-215ENST00000619449 KDM5CP41229 1560 aa28.29■■■□□ 2.12
MALAT1-215ENST00000619449 PLEKHH2Q8IVE3 1493 aa28.29■■■□□ 2.12
MALAT1-215ENST00000619449 MIA2Q96PC5 1412 aa28.29■■■□□ 2.12
MALAT1-215ENST00000619449 TRAPPC8Q9Y2L5 1435 aa28.29■■■□□ 2.12
MALAT1-215ENST00000619449 ZNF777Q9ULD5 760 aaPredicted RBP28.29■■■□□ 2.12
MALAT1-215ENST00000619449 ZNF518AQ6AHZ1 1483 aa28.28■■■□□ 2.12
MALAT1-215ENST00000619449 SYCP2Q9BX26 1530 aa28.28■■■□□ 2.12
MALAT1-215ENST00000619449 MBD5Q9P267 1494 aa28.27■■■□□ 2.12
MALAT1-215ENST00000619449 AFAP1Q8N556 730 aa28.25■■■□□ 2.11
MALAT1-215ENST00000619449 CAMSAP2Q08AD1 1489 aa28.24■■■□□ 2.11
MALAT1-215ENST00000619449 MAGI2Q86UL8 1455 aa28.23■■■□□ 2.11
MALAT1-215ENST00000619449 HNRNPMP52272 730 aaKnown RBP eCLIP28.23■■■□□ 2.11
MALAT1-215ENST00000619449 SENP3Q9H4L4 574 aaPredicted RBP28.21■■■□□ 2.11
MALAT1-215ENST00000619449 FGD6Q6ZV73 1430 aa28.19■■■□□ 2.1
MALAT1-215ENST00000619449 MLH3Q9UHC1 1453 aa28.19■■■□□ 2.1
MALAT1-215ENST00000619449 ARHGEF40Q8TER5 1519 aa28.18■■■□□ 2.1
MALAT1-215ENST00000619449 YEATS2Q9ULM3 1422 aa28.18■■■□□ 2.1
MALAT1-215ENST00000619449 TCOF1Q13428 1488 aaKnown RBP28.16■■■□□ 2.1
MALAT1-215ENST00000619449 HECW2Q9P2P5 1572 aa28.16■■■□□ 2.1
MALAT1-215ENST00000619449 ZFYVE16Q7Z3T8 1539 aa28.15■■■□□ 2.1
MALAT1-215ENST00000619449 PPARGC1BQ86YN6 1023 aaKnown RBP28.15■■■□□ 2.1
MALAT1-215ENST00000619449 ARHGEF5Q12774 1597 aa28.15■■■□□ 2.1
MALAT1-215ENST00000619449 PTPN23Q9H3S7 1636 aa28.14■■■□□ 2.1
MALAT1-215ENST00000619449 KIDINS220Q9ULH0 1771 aa28.12■■■□□ 2.09
MALAT1-215ENST00000619449 CCDC141Q6ZP82 1450 aa28.1■■■□□ 2.09
MALAT1-215ENST00000619449 RSPH4AQ5TD94 716 aa28.1■■■□□ 2.09
MALAT1-215ENST00000619449 INO80Q9ULG1 1556 aaPredicted RBP28.1■■■□□ 2.09
MALAT1-215ENST00000619449 DIP2CQ9Y2E4 1556 aa28.07■■■□□ 2.08
MALAT1-215ENST00000619449 ABCA6Q8N139 1617 aa28.07■■■□□ 2.08
MALAT1-215ENST00000619449 SPAG9O60271 1321 aaKnown RBP28.06■■■□□ 2.08
MALAT1-215ENST00000619449 RTEL1-TNFRSF6BF6WH68 1400 aa28.05■■■□□ 2.08
MALAT1-215ENST00000619449 ATP10AO60312 1499 aa28.05■■■□□ 2.08
MALAT1-215ENST00000619449 ATP7AQ04656 1500 aa28.05■■■□□ 2.08
MALAT1-215ENST00000619449 SIGLEC1Q9BZZ2 1709 aa28.04■■■□□ 2.08
MALAT1-215ENST00000619449 REREQ9P2R6 1566 aa28.03■■■□□ 2.08
MALAT1-215ENST00000619449 MAST1Q9Y2H9 1570 aa28.01■■■□□ 2.07
MALAT1-215ENST00000619449 ABCC5O15440 1437 aa28.01■■■□□ 2.07
MALAT1-215ENST00000619449 C9orf84Q5VXU9 1444 aa28.01■■■□□ 2.07
MALAT1-215ENST00000619449 DNMT1P26358 1616 aaKnown RBP28■■■□□ 2.07
MALAT1-215ENST00000619449 DAPK1P53355 1430 aa27.97■■■□□ 2.07
MALAT1-215ENST00000619449 RRBP1Q9P2E9 1410 aaKnown RBP27.96■■■□□ 2.07
MALAT1-215ENST00000619449 CROCC2H7BZ55 1655 aa27.96■■■□□ 2.07
MALAT1-215ENST00000619449 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.96■■■□□ 2.07
MALAT1-215ENST00000619449 SHANK2Q9UPX8 1470 aa27.95■■■□□ 2.07
MALAT1-215ENST00000619449 TSPY4P0CV99 314 aa27.93■■■□□ 2.06
MALAT1-215ENST00000619449 TSPY10P0CW01 314 aa27.93■■■□□ 2.06
MALAT1-215ENST00000619449 PHF23Q9BUL5 403 aaPredicted RBP27.93■■■□□ 2.06
MALAT1-215ENST00000619449 MYT1LQ9UL68 1186 aa27.93■■■□□ 2.06
MALAT1-215ENST00000619449 PLXNC1O60486 1568 aa27.92■■■□□ 2.06
MALAT1-215ENST00000619449 KDM4FA0A1W2PPD8 638 aa27.92■■■□□ 2.06
MALAT1-215ENST00000619449 AGLP35573 1532 aa27.92■■■□□ 2.06
MALAT1-215ENST00000619449 FAM50AQ14320 339 aaKnown RBP27.9■■■□□ 2.06
MALAT1-215ENST00000619449 ADGBQ8N7X0 1667 aa27.9■■■□□ 2.06
MALAT1-215ENST00000619449 BCORL1Q5H9F3 1711 aa27.89■■■□□ 2.05
MALAT1-215ENST00000619449 A2MP01023 1474 aa27.89■■■□□ 2.05
MALAT1-215ENST00000619449 PTPRKQ15262 1439 aa27.86■■■□□ 2.05
MALAT1-215ENST00000619449 ADAMTSL3P82987 1691 aa27.86■■■□□ 2.05
MALAT1-215ENST00000619449 DHX29Q7Z478 1369 aaKnown RBP27.85■■■□□ 2.05
MALAT1-215ENST00000619449 ADGRL2O95490 1459 aa27.83■■■□□ 2.05
MALAT1-215ENST00000619449 ARID4BQ4LE39 1312 aaPredicted RBP27.83■■■□□ 2.05
MALAT1-215ENST00000619449 NCOA1Q15788 1441 aa27.8■■■□□ 2.04
MALAT1-215ENST00000619449 CHIC2Q9UKJ5 165 aa27.76■■■□□ 2.03
MALAT1-215ENST00000619449 KIF15Q9NS87 1388 aa27.75■■■□□ 2.03
MALAT1-215ENST00000619449 DUOX2Q9NRD8 1548 aa27.75■■■□□ 2.03
MALAT1-215ENST00000619449 MADDQ8WXG6 1647 aa27.74■■■□□ 2.03
MALAT1-215ENST00000619449 ANKRD30AQ9BXX3 1397 aa27.74■■■□□ 2.03
MALAT1-215ENST00000619449 ROCK1Q13464 1354 aa27.72■■■□□ 2.03
MALAT1-215ENST00000619449 MLECQ14165 292 aa27.71■■■□□ 2.03
MALAT1-215ENST00000619449 RRP7BPQ9NSQ0 103 aa27.71■■■□□ 2.03
MALAT1-215ENST00000619449 EIF2AK4Q9P2K8 1649 aaKnown RBP27.7■■■□□ 2.02
MALAT1-215ENST00000619449 ERBINQ96RT1 1412 aa27.67■■■□□ 2.02
MALAT1-215ENST00000619449 FER1L4A9Z1Z3 1794 aa27.66■■■□□ 2.02
MALAT1-215ENST00000619449 KIF3BO15066 747 aa27.65■■■□□ 2.02
MALAT1-215ENST00000619449 RNF17Q9BXT8 1623 aaKnown RBP27.65■■■□□ 2.02
MALAT1-215ENST00000619449 PTPRMP28827 1452 aa27.64■■■□□ 2.02
MALAT1-215ENST00000619449 ITGAEP38570 1179 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 813.7 ms