RNA–Protein interactions for RNA: ENST00000619408.1

TVP23A-211, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-211ENST00000619408 CAMSAP2Q08AD1 1489 aa11.38□□□□□ -0.59
TVP23A-211ENST00000619408 TTC37Q6PGP7 1564 aa11.37□□□□□ -0.59
TVP23A-211ENST00000619408 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.37□□□□□ -0.59
TVP23A-211ENST00000619408 NPM1P06748 294 aaKnown RBP eCLIP11.37□□□□□ -0.59
TVP23A-211ENST00000619408 MYO5CQ9NQX4 1742 aa11.35□□□□□ -0.59
TVP23A-211ENST00000619408 DNMT1P26358 1616 aaKnown RBP11.35□□□□□ -0.59
TVP23A-211ENST00000619408 ASXL2Q76L83 1435 aa11.35□□□□□ -0.59
TVP23A-211ENST00000619408 CCER1Q8TC90 406 aaPredicted RBP11.34□□□□□ -0.59
TVP23A-211ENST00000619408 ARHGAP5Q13017 1502 aa11.34□□□□□ -0.59
TVP23A-211ENST00000619408 ERICH6Q7L0X2 663 aa11.33□□□□□ -0.6
TVP23A-211ENST00000619408 KCNH8Q96L42 1107 aa11.33□□□□□ -0.6
TVP23A-211ENST00000619408 DAPK1P53355 1430 aa11.33□□□□□ -0.6
TVP23A-211ENST00000619408 SETD5Q9C0A6 1442 aa11.33□□□□□ -0.6
TVP23A-211ENST00000619408 ZNF777Q9ULD5 760 aaPredicted RBP11.32□□□□□ -0.6
TVP23A-211ENST00000619408 CDC42BPBQ9Y5S2 1711 aa11.32□□□□□ -0.6
TVP23A-211ENST00000619408 CROCC2H7BZ55 1655 aa11.31□□□□□ -0.6
TVP23A-211ENST00000619408 HFM1A2PYH4 1435 aa11.31□□□□□ -0.6
TVP23A-211ENST00000619408 AKNAQ7Z591 1439 aa11.31□□□□□ -0.6
TVP23A-211ENST00000619408 PLEKHH2Q8IVE3 1493 aa11.31□□□□□ -0.6
TVP23A-211ENST00000619408 ABCA9Q8IUA7 1624 aa11.31□□□□□ -0.6
TVP23A-211ENST00000619408 ARAP3Q8WWN8 1544 aa11.3□□□□□ -0.6
TVP23A-211ENST00000619408 RAB3GAP2Q9H2M9 1393 aa11.3□□□□□ -0.6
TVP23A-211ENST00000619408 SAMD9LQ8IVG5 1584 aa11.3□□□□□ -0.6
TVP23A-211ENST00000619408 PTPRKQ15262 1439 aa11.3□□□□□ -0.6
TVP23A-211ENST00000619408 CYB5RLQ6IPT4 315 aa11.3□□□□□ -0.6
TVP23A-211ENST00000619408 ZNF644Q9H582 1327 aaPredicted RBP11.3□□□□□ -0.6
TVP23A-211ENST00000619408 SCAF1Q9H7N4 1312 aaKnown RBP11.3□□□□□ -0.6
TVP23A-211ENST00000619408 GCC2Q8IWJ2 1684 aa11.3□□□□□ -0.6
TVP23A-211ENST00000619408 ARHGEF5Q12774 1597 aa11.29□□□□□ -0.6
TVP23A-211ENST00000619408 ABCC5O15440 1437 aa11.29□□□□□ -0.6
TVP23A-211ENST00000619408 PLCH2O75038 1416 aa11.29□□□□□ -0.6
TVP23A-211ENST00000619408 ADGBQ8N7X0 1667 aa11.29□□□□□ -0.6
TVP23A-211ENST00000619408 MAPKBP1O60336 1514 aa11.29□□□□□ -0.6
TVP23A-211ENST00000619408 ROCK1Q13464 1354 aa11.28□□□□□ -0.6
TVP23A-211ENST00000619408 SHANK2Q9UPX8 1470 aa11.28□□□□□ -0.6
TVP23A-211ENST00000619408 CCDC141Q6ZP82 1450 aa11.26□□□□□ -0.61
TVP23A-211ENST00000619408 SYCP2Q9BX26 1530 aa11.26□□□□□ -0.61
TVP23A-211ENST00000619408 EFCAB2Q5VUJ9 269 aa11.26□□□□□ -0.61
TVP23A-211ENST00000619408 NAIPQ13075 1403 aa11.26□□□□□ -0.61
TVP23A-211ENST00000619408 KIAA1107Q9UPP5 1409 aa11.26□□□□□ -0.61
TVP23A-211ENST00000619408 ABCC1P33527 1531 aa11.25□□□□□ -0.61
TVP23A-211ENST00000619408 CHIC2Q9UKJ5 165 aa11.25□□□□□ -0.61
TVP23A-211ENST00000619408 ADGRL2O95490 1459 aa11.25□□□□□ -0.61
TVP23A-211ENST00000619408 CFAP74Q9C0B2 1584 aa11.24□□□□□ -0.61
TVP23A-211ENST00000619408 CENPBP07199 599 aaPredicted RBP11.24□□□□□ -0.61
TVP23A-211ENST00000619408 RSPH4AQ5TD94 716 aa11.24□□□□□ -0.61
TVP23A-211ENST00000619408 ANKRD30AQ9BXX3 1397 aa11.24□□□□□ -0.61
TVP23A-211ENST00000619408 C9orf84Q5VXU9 1444 aa11.24□□□□□ -0.61
TVP23A-211ENST00000619408 FANCAO15360 1455 aa11.24□□□□□ -0.61
TVP23A-211ENST00000619408 MBD5Q9P267 1494 aa11.24□□□□□ -0.61
TVP23A-211ENST00000619408 PLPPR3Q6T4P5 718 aa11.23□□□□□ -0.61
TVP23A-211ENST00000619408 RRP7BPQ9NSQ0 103 aa11.23□□□□□ -0.61
TVP23A-211ENST00000619408 DHX57Q6P158 1386 aaKnown RBP11.23□□□□□ -0.61
TVP23A-211ENST00000619408 TSPY4P0CV99 314 aa11.22□□□□□ -0.61
TVP23A-211ENST00000619408 TSPY10P0CW01 314 aa11.22□□□□□ -0.61
TVP23A-211ENST00000619408 CLSPNQ9HAW4 1339 aa11.22□□□□□ -0.61
TVP23A-211ENST00000619408 ACIN1Q9UKV3 1341 aaKnown RBP11.22□□□□□ -0.61
TVP23A-211ENST00000619408 MAST1Q9Y2H9 1570 aa11.21□□□□□ -0.61
TVP23A-211ENST00000619408 CD109Q6YHK3 1445 aa11.21□□□□□ -0.61
TVP23A-211ENST00000619408 HNRNPMP52272 730 aaKnown RBP eCLIP11.21□□□□□ -0.61
TVP23A-211ENST00000619408 NCOA1Q15788 1441 aa11.2□□□□□ -0.62
TVP23A-211ENST00000619408 GLI2P10070 1586 aa11.2□□□□□ -0.62
TVP23A-211ENST00000619408 ADGRL1O94910 1474 aa11.19□□□□□ -0.62
TVP23A-211ENST00000619408 MAP3K4Q9Y6R4 1608 aa11.18□□□□□ -0.62
TVP23A-211ENST00000619408 PLXNC1O60486 1568 aa11.18□□□□□ -0.62
TVP23A-211ENST00000619408 DIP2BQ9P265 1576 aa11.18□□□□□ -0.62
TVP23A-211ENST00000619408 ARHGEF12Q9NZN5 1544 aa11.18□□□□□ -0.62
TVP23A-211ENST00000619408 KDM6BO15054 1643 aa11.17□□□□□ -0.62
TVP23A-211ENST00000619408 KIF15Q9NS87 1388 aa11.16□□□□□ -0.62
TVP23A-211ENST00000619408 NEO1Q92859 1461 aa11.16□□□□□ -0.62
TVP23A-211ENST00000619408 ANKRD50Q9ULJ7 1429 aa11.16□□□□□ -0.62
TVP23A-211ENST00000619408 TRAPPC8Q9Y2L5 1435 aa11.16□□□□□ -0.62
TVP23A-211ENST00000619408 SCAPERQ9BY12 1400 aa11.15□□□□□ -0.62
TVP23A-211ENST00000619408 TRHP20396 242 aaPredicted RBP11.14□□□□□ -0.63
TVP23A-211ENST00000619408 TRIM52Q96A61 297 aa11.14□□□□□ -0.63
TVP23A-211ENST00000619408 ZFYVE16Q7Z3T8 1539 aa11.14□□□□□ -0.63
TVP23A-211ENST00000619408 ZNF518AQ6AHZ1 1483 aa11.13□□□□□ -0.63
TVP23A-211ENST00000619408 SPAG9O60271 1321 aaKnown RBP11.13□□□□□ -0.63
TVP23A-211ENST00000619408 INO80Q9ULG1 1556 aaPredicted RBP11.13□□□□□ -0.63
TVP23A-211ENST00000619408 RTEL1-TNFRSF6BF6WH68 1400 aa11.13□□□□□ -0.63
TVP23A-211ENST00000619408 MSH5O43196 834 aa11.13□□□□□ -0.63
TVP23A-211ENST00000619408 ATP7AQ04656 1500 aa11.13□□□□□ -0.63
TVP23A-211ENST00000619408 DUOX2Q9NRD8 1548 aa11.13□□□□□ -0.63
TVP23A-211ENST00000619408 POGZQ7Z3K3 1410 aa11.12□□□□□ -0.63
TVP23A-211ENST00000619408 TEX14Q8IWB6 1497 aa11.12□□□□□ -0.63
TVP23A-211ENST00000619408 ERBINQ96RT1 1412 aa11.11□□□□□ -0.63
TVP23A-211ENST00000619408 FAM69CQ0P6D2 419 aa11.11□□□□□ -0.63
TVP23A-211ENST00000619408 KDM5CP41229 1560 aa11.1□□□□□ -0.63
TVP23A-211ENST00000619408 HECW2Q9P2P5 1572 aa11.09□□□□□ -0.63
TVP23A-211ENST00000619408 DENND4BO75064 1496 aaPredicted RBP11.09□□□□□ -0.63
TVP23A-211ENST00000619408 AFAP1Q8N556 730 aa11.09□□□□□ -0.63
TVP23A-211ENST00000619408 MYT1LQ9UL68 1186 aa11.09□□□□□ -0.63
TVP23A-211ENST00000619408 KDM5DQ9BY66 1539 aa11.09□□□□□ -0.63
TVP23A-211ENST00000619408 UNC13BO14795 1591 aa11.08□□□□□ -0.64
TVP23A-211ENST00000619408 MPHOSPH9Q99550 1183 aa11.07□□□□□ -0.64
TVP23A-211ENST00000619408 KIF13AQ9H1H9 1805 aa11.07□□□□□ -0.64
TVP23A-211ENST00000619408 PZPP20742 1482 aa11.06□□□□□ -0.64
TVP23A-211ENST00000619408 PPRC1Q5VV67 1664 aaKnown RBP11.06□□□□□ -0.64
TVP23A-211ENST00000619408 SLC4A1APQ9BWU0 796 aaKnown RBP11.06□□□□□ -0.64
TVP23A-211ENST00000619408 MLH3Q9UHC1 1453 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms