RNA–Protein interactions for RNA: ENST00000619192.4

PMPCA-209, Transcript of peptidase, mitochondrial processing alpha subunit, human

TSL 2

Gene PMPCA, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PMPCA-209	ENST00000619192	GPATCH8	Q9UKJ3	1502 aa	Known RBP	33.88	■■■■□ 3.01
PMPCA-209	ENST00000619192	ARHGAP5	Q13017	1502 aa		33.86	■■■■□ 3.01
PMPCA-209	ENST00000619192	EFCAB2	Q5VUJ9	269 aa		33.86	■■■■□ 3.01
PMPCA-209	ENST00000619192	RICTOR	Q6R327	1708 aa		33.85	■■■■□ 3.01
PMPCA-209	ENST00000619192	SUPT6H	Q7KZ85	1726 aa	Known RBP	33.84	■■■■□ 3.01
PMPCA-209	ENST00000619192	DENND4B	O75064	1496 aa	Predicted RBP	33.82	■■■■□ 3.01
PMPCA-209	ENST00000619192	ADGRL1	O94910	1474 aa		33.82	■■■■□ 3.01
PMPCA-209	ENST00000619192	NCOA2	Q15596	1464 aa		33.8	■■■■□ 3
PMPCA-209	ENST00000619192	ZMYM4	Q5VZL5	1548 aa		33.78	■■■■□ 3
PMPCA-209	ENST00000619192	ITSN2	Q9NZM3	1697 aa		33.77	■■■■□ 3
PMPCA-209	ENST00000619192	CCNB3	Q8WWL7	1395 aa		33.76	■■■■□ 3
PMPCA-209	ENST00000619192	ABCC1	P33527	1531 aa		33.76	■■■■□ 3
PMPCA-209	ENST00000619192	POGZ	Q7Z3K3	1410 aa		33.76	■■■□□ 2.99
PMPCA-209	ENST00000619192	SCAPER	Q9BY12	1400 aa		33.76	■■■□□ 2.99
PMPCA-209	ENST00000619192	RAPGEF3	O95398	923 aa		33.74	■■■□□ 2.99
PMPCA-209	ENST00000619192	KANK4	Q5T7N3	995 aa	Predicted RBP	33.74	■■■□□ 2.99
PMPCA-209	ENST00000619192	SAMD9L	Q8IVG5	1584 aa		33.72	■■■□□ 2.99
PMPCA-209	ENST00000619192	ARHGEF12	Q9NZN5	1544 aa		33.69	■■■□□ 2.98
PMPCA-209	ENST00000619192	KDM5C	P41229	1560 aa		33.68	■■■□□ 2.98
PMPCA-209	ENST00000619192	ZNF518A	Q6AHZ1	1483 aa		33.66	■■■□□ 2.98
PMPCA-209	ENST00000619192	MAGI2	Q86UL8	1455 aa		33.66	■■■□□ 2.98
PMPCA-209	ENST00000619192	KIAA1107	Q9UPP5	1409 aa		33.65	■■■□□ 2.98
PMPCA-209	ENST00000619192	APLP2	Q06481	763 aa		33.65	■■■□□ 2.98
PMPCA-209	ENST00000619192	CFDP1	Q9UEE9	299 aa	Predicted RBP	33.64	■■■□□ 2.98
PMPCA-209	ENST00000619192	PLEKHH2	Q8IVE3	1493 aa		33.63	■■■□□ 2.97
PMPCA-209	ENST00000619192	ARHGEF40	Q8TER5	1519 aa		33.63	■■■□□ 2.97
PMPCA-209	ENST00000619192	SYCP2	Q9BX26	1530 aa		33.58	■■■□□ 2.97
PMPCA-209	ENST00000619192	TRAPPC8	Q9Y2L5	1435 aa		33.58	■■■□□ 2.97
PMPCA-209	ENST00000619192	ZFYVE16	Q7Z3T8	1539 aa		33.55	■■■□□ 2.96
PMPCA-209	ENST00000619192	MLH3	Q9UHC1	1453 aa		33.55	■■■□□ 2.96
PMPCA-209	ENST00000619192	MYOM3	Q5VTT5	1437 aa		33.54	■■■□□ 2.96
PMPCA-209	ENST00000619192	HECW2	Q9P2P5	1572 aa		33.53	■■■□□ 2.96
PMPCA-209	ENST00000619192	MIA2	Q96PC5	1412 aa		33.53	■■■□□ 2.96
PMPCA-209	ENST00000619192	MBD5	Q9P267	1494 aa		33.52	■■■□□ 2.96
PMPCA-209	ENST00000619192	YEATS2	Q9ULM3	1422 aa		33.52	■■■□□ 2.96
PMPCA-209	ENST00000619192	AFAP1	Q8N556	730 aa		33.51	■■■□□ 2.95
PMPCA-209	ENST00000619192	ZNF777	Q9ULD5	760 aa	Predicted RBP	33.5	■■■□□ 2.95
PMPCA-209	ENST00000619192	CAMSAP2	Q08AD1	1489 aa		33.49	■■■□□ 2.95
PMPCA-209	ENST00000619192	ZNF644	Q9H582	1327 aa	Predicted RBP	33.48	■■■□□ 2.95
PMPCA-209	ENST00000619192	KIDINS220	Q9ULH0	1771 aa		33.45	■■■□□ 2.95
PMPCA-209	ENST00000619192	HNRNPM	P52272	730 aa	Known RBP eCLIP	33.43	■■■□□ 2.94
PMPCA-209	ENST00000619192	ARHGEF5	Q12774	1597 aa		33.43	■■■□□ 2.94
PMPCA-209	ENST00000619192	RERE	Q9P2R6	1566 aa		33.43	■■■□□ 2.94
PMPCA-209	ENST00000619192	DIP2C	Q9Y2E4	1556 aa		33.43	■■■□□ 2.94
PMPCA-209	ENST00000619192	INO80	Q9ULG1	1556 aa	Predicted RBP	33.42	■■■□□ 2.94
PMPCA-209	ENST00000619192	ABCA6	Q8N139	1617 aa		33.4	■■■□□ 2.94
PMPCA-209	ENST00000619192	ATP10A	O60312	1499 aa		33.4	■■■□□ 2.94
PMPCA-209	ENST00000619192	SIGLEC1	Q9BZZ2	1709 aa		33.39	■■■□□ 2.94
PMPCA-209	ENST00000619192	CCDC141	Q6ZP82	1450 aa		33.37	■■■□□ 2.93
PMPCA-209	ENST00000619192	KDM4F	A0A1W2PPD8	638 aa		33.36	■■■□□ 2.93
PMPCA-209	ENST00000619192	C9orf84	Q5VXU9	1444 aa		33.36	■■■□□ 2.93
PMPCA-209	ENST00000619192	FGD6	Q6ZV73	1430 aa		33.36	■■■□□ 2.93
PMPCA-209	ENST00000619192	ATP7A	Q04656	1500 aa		33.35	■■■□□ 2.93
PMPCA-209	ENST00000619192	RSPH4A	Q5TD94	716 aa		33.35	■■■□□ 2.93
PMPCA-209	ENST00000619192	TCOF1	Q13428	1488 aa	Known RBP	33.35	■■■□□ 2.93
PMPCA-209	ENST00000619192	PTPN23	Q9H3S7	1636 aa		33.33	■■■□□ 2.93
PMPCA-209	ENST00000619192	RTEL1-TNFRSF6B	F6WH68	1400 aa		33.33	■■■□□ 2.93
PMPCA-209	ENST00000619192	SPAG9	O60271	1321 aa	Known RBP	33.31	■■■□□ 2.92
PMPCA-209	ENST00000619192	BCORL1	Q5H9F3	1711 aa		33.31	■■■□□ 2.92
PMPCA-209	ENST00000619192	ADAMTSL3	P82987	1691 aa		33.29	■■■□□ 2.92
PMPCA-209	ENST00000619192	AGL	P35573	1532 aa		33.27	■■■□□ 2.92
PMPCA-209	ENST00000619192	MAST1	Q9Y2H9	1570 aa		33.26	■■■□□ 2.92
PMPCA-209	ENST00000619192	PLXNC1	O60486	1568 aa		33.24	■■■□□ 2.91
PMPCA-209	ENST00000619192	ADGB	Q8N7X0	1667 aa		33.21	■■■□□ 2.91
PMPCA-209	ENST00000619192	DNMT1	P26358	1616 aa	Known RBP	33.19	■■■□□ 2.9
PMPCA-209	ENST00000619192	CROCC2	H7BZ55	1655 aa		33.19	■■■□□ 2.9
PMPCA-209	ENST00000619192	SHANK2	Q9UPX8	1470 aa		33.18	■■■□□ 2.9
PMPCA-209	ENST00000619192	ABCC5	O15440	1437 aa		33.15	■■■□□ 2.9
PMPCA-209	ENST00000619192	A2M	P01023	1474 aa		33.15	■■■□□ 2.9
PMPCA-209	ENST00000619192	MYT1L	Q9UL68	1186 aa		33.15	■■■□□ 2.9
PMPCA-209	ENST00000619192	ARID4B	Q4LE39	1312 aa	Predicted RBP	33.13	■■■□□ 2.89
PMPCA-209	ENST00000619192	MADD	Q8WXG6	1647 aa		33.13	■■■□□ 2.89
PMPCA-209	ENST00000619192	DAPK1	P53355	1430 aa		33.11	■■■□□ 2.89
PMPCA-209	ENST00000619192	TSPY4	P0CV99	314 aa		33.11	■■■□□ 2.89
PMPCA-209	ENST00000619192	TSPY10	P0CW01	314 aa		33.11	■■■□□ 2.89
PMPCA-209	ENST00000619192	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	33.08	■■■□□ 2.89
PMPCA-209	ENST00000619192	DHX29	Q7Z478	1369 aa	Known RBP	33.07	■■■□□ 2.88
PMPCA-209	ENST00000619192	FER1L4	A9Z1Z3	1794 aa		33.04	■■■□□ 2.88
PMPCA-209	ENST00000619192	PPARGC1B	Q86YN6	1023 aa	Known RBP	33.03	■■■□□ 2.88
PMPCA-209	ENST00000619192	RRBP1	Q9P2E9	1410 aa	Known RBP	33.02	■■■□□ 2.88
PMPCA-209	ENST00000619192	PTPRM	P28827	1452 aa		33.01	■■■□□ 2.88
PMPCA-209	ENST00000619192	RIMS1	Q86UR5	1692 aa	Known RBP	32.99	■■■□□ 2.87
PMPCA-209	ENST00000619192	ADGRL2	O95490	1459 aa		32.99	■■■□□ 2.87
PMPCA-209	ENST00000619192	AEBP2	Q6ZN18	517 aa	Predicted RBP	32.98	■■■□□ 2.87
PMPCA-209	ENST00000619192	DUOX2	Q9NRD8	1548 aa		32.95	■■■□□ 2.87
PMPCA-209	ENST00000619192	EIF2AK4	Q9P2K8	1649 aa	Known RBP	32.95	■■■□□ 2.86
PMPCA-209	ENST00000619192	MLEC	Q14165	292 aa		32.94	■■■□□ 2.86
PMPCA-209	ENST00000619192	FAM50A	Q14320	339 aa	Known RBP	32.93	■■■□□ 2.86
PMPCA-209	ENST00000619192	NCOA1	Q15788	1441 aa		32.92	■■■□□ 2.86
PMPCA-209	ENST00000619192	PTPRK	Q15262	1439 aa		32.9	■■■□□ 2.86
PMPCA-209	ENST00000619192	RNF17	Q9BXT8	1623 aa	Known RBP	32.89	■■■□□ 2.86
PMPCA-209	ENST00000619192	FAM135A	Q9P2D6	1515 aa		32.89	■■■□□ 2.86
PMPCA-209	ENST00000619192	KIF15	Q9NS87	1388 aa		32.89	■■■□□ 2.86
PMPCA-209	ENST00000619192	CNTLN	Q9NXG0	1405 aa		32.87	■■■□□ 2.85
PMPCA-209	ENST00000619192	ANKRD30A	Q9BXX3	1397 aa		32.87	■■■□□ 2.85
PMPCA-209	ENST00000619192	PPP6R1	Q9UPN7	881 aa		32.87	■■■□□ 2.85
PMPCA-209	ENST00000619192	MROH2A	A6NES4	1674 aa		32.87	■■■□□ 2.85
PMPCA-209	ENST00000619192	ERBIN	Q96RT1	1412 aa		32.86	■■■□□ 2.85
PMPCA-209	ENST00000619192	ROCK1	Q13464	1354 aa		32.82	■■■□□ 2.84
PMPCA-209	ENST00000619192	MROH1	Q8NDA8	1641 aa		32.81	■■■□□ 2.84

Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms