RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, human

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTNAP3B-215	ENST00000619138	NCOA2	Q15596	1464 aa		18.8	■□□□□ 0.6
CNTNAP3B-215	ENST00000619138	RRBP1	Q9P2E9	1410 aa	Known RBP	18.8	■□□□□ 0.6
CNTNAP3B-215	ENST00000619138	CHD1	O14646	1710 aa		18.8	■□□□□ 0.6
CNTNAP3B-215	ENST00000619138	PAK3	O75914	559 aa	Predicted RBP	18.79	■□□□□ 0.6
CNTNAP3B-215	ENST00000619138	CCER2	I3L3R5	266 aa		18.79	■□□□□ 0.6
CNTNAP3B-215	ENST00000619138	OSCAR	Q8IYS5	282 aa		18.79	■□□□□ 0.6
CNTNAP3B-215	ENST00000619138	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	18.79	■□□□□ 0.6
CNTNAP3B-215	ENST00000619138	HECW1	Q76N89	1606 aa		18.79	■□□□□ 0.6
CNTNAP3B-215	ENST00000619138	CFDP1	Q9UEE9	299 aa	Predicted RBP	18.78	■□□□□ 0.6
CNTNAP3B-215	ENST00000619138	NOP58	Q9Y2X3	529 aa	Known RBP	18.78	■□□□□ 0.6
CNTNAP3B-215	ENST00000619138	MAP3K1	Q13233	1512 aa		18.78	■□□□□ 0.6
CNTNAP3B-215	ENST00000619138	CCDC18	Q5T9S5	1454 aa		18.77	■□□□□ 0.6
CNTNAP3B-215	ENST00000619138	MRS2	Q9HD23	443 aa		18.77	■□□□□ 0.59
CNTNAP3B-215	ENST00000619138	FANCI	Q9NVI1	1328 aa		18.76	■□□□□ 0.59
CNTNAP3B-215	ENST00000619138	PPP4R2	Q9NY27	417 aa		18.76	■□□□□ 0.59
CNTNAP3B-215	ENST00000619138	ZNF644	Q9H582	1327 aa	Predicted RBP	18.75	■□□□□ 0.59
CNTNAP3B-215	ENST00000619138	FGD6	Q6ZV73	1430 aa		18.74	■□□□□ 0.59
CNTNAP3B-215	ENST00000619138	CFAP43	Q8NDM7	1665 aa		18.74	■□□□□ 0.59
CNTNAP3B-215	ENST00000619138	ANP32A	P39687	249 aa	Known RBP	18.73	■□□□□ 0.59
CNTNAP3B-215	ENST00000619138	NUP153	P49790	1475 aa	Known RBP	18.73	■□□□□ 0.59
CNTNAP3B-215	ENST00000619138	CCDC184	Q52MB2	194 aa		18.73	■□□□□ 0.59
CNTNAP3B-215	ENST00000619138	SALL2	Q9Y467	1007 aa	Predicted RBP	18.72	■□□□□ 0.59
CNTNAP3B-215	ENST00000619138	LAS1L	Q9Y4W2	734 aa	Known RBP	18.72	■□□□□ 0.59
CNTNAP3B-215	ENST00000619138	MYOM3	Q5VTT5	1437 aa		18.71	■□□□□ 0.59
CNTNAP3B-215	ENST00000619138	SETD5	Q9C0A6	1442 aa		18.7	■□□□□ 0.58
CNTNAP3B-215	ENST00000619138	ZBTB47	Q9UFB7	747 aa	Predicted RBP	18.7	■□□□□ 0.58
CNTNAP3B-215	ENST00000619138	RAPGEF6	Q8TEU7	1601 aa		18.7	■□□□□ 0.58
CNTNAP3B-215	ENST00000619138	EHBP1L1	Q8N3D4	1523 aa		18.69	■□□□□ 0.58
CNTNAP3B-215	ENST00000619138	MAGI3	Q5TCQ9	1506 aa		18.69	■□□□□ 0.58
CNTNAP3B-215	ENST00000619138	MYT1L	Q9UL68	1186 aa		18.67	■□□□□ 0.58
CNTNAP3B-215	ENST00000619138	ZNF326	Q5BKZ1	582 aa	Known RBP	18.67	■□□□□ 0.58
CNTNAP3B-215	ENST00000619138	IL27	Q8NEV9	243 aa		18.66	■□□□□ 0.58
CNTNAP3B-215	ENST00000619138	SUPT6H	Q7KZ85	1726 aa	Known RBP	18.66	■□□□□ 0.58
CNTNAP3B-215	ENST00000619138	ERCC6L2	Q5T890	1561 aa		18.65	■□□□□ 0.58
CNTNAP3B-215	ENST00000619138	LRRIQ1	Q96JM4	1722 aa		18.65	■□□□□ 0.58
CNTNAP3B-215	ENST00000619138	NPM1	P06748	294 aa	Known RBP eCLIP	18.65	■□□□□ 0.58
CNTNAP3B-215	ENST00000619138	UACA	Q9BZF9	1416 aa		18.62	■□□□□ 0.57
CNTNAP3B-215	ENST00000619138	TRO	Q12816	1431 aa	Predicted RBP	18.62	■□□□□ 0.57
CNTNAP3B-215	ENST00000619138	HSPA5	P11021	654 aa	Known RBP	18.61	■□□□□ 0.57
CNTNAP3B-215	ENST00000619138	ATP10B	O94823	1461 aa		18.6	■□□□□ 0.57
CNTNAP3B-215	ENST00000619138	HNRNPM	P52272	730 aa	Known RBP eCLIP	18.59	■□□□□ 0.57
CNTNAP3B-215	ENST00000619138	FOXD1	Q16676	465 aa		18.58	■□□□□ 0.56
CNTNAP3B-215	ENST00000619138	TSPY4	P0CV99	314 aa		18.57	■□□□□ 0.56
CNTNAP3B-215	ENST00000619138	TSPY10	P0CW01	314 aa		18.57	■□□□□ 0.56
CNTNAP3B-215	ENST00000619138	CYB5RL	Q6IPT4	315 aa		18.56	■□□□□ 0.56
CNTNAP3B-215	ENST00000619138	DAXX	Q9UER7	740 aa	Predicted RBP	18.55	■□□□□ 0.56
CNTNAP3B-215	ENST00000619138	PTPRK	Q15262	1439 aa		18.54	■□□□□ 0.56
CNTNAP3B-215	ENST00000619138	ARHGEF11	O15085	1522 aa		18.53	■□□□□ 0.56
CNTNAP3B-215	ENST00000619138	MAPKBP1	O60336	1514 aa		18.53	■□□□□ 0.56
CNTNAP3B-215	ENST00000619138	PTPN23	Q9H3S7	1636 aa		18.53	■□□□□ 0.56
CNTNAP3B-215	ENST00000619138	NEFM	P07197	916 aa		18.53	■□□□□ 0.56
CNTNAP3B-215	ENST00000619138	EIF4G2	P78344	907 aa	Known RBP eCLIP	18.52	■□□□□ 0.56
CNTNAP3B-215	ENST00000619138	ARX	Q96QS3	562 aa		18.52	■□□□□ 0.55
CNTNAP3B-215	ENST00000619138	ABCA8	O94911	1581 aa		18.49	■□□□□ 0.55
CNTNAP3B-215	ENST00000619138	WASHC2A	Q641Q2	1341 aa		18.48	■□□□□ 0.55
CNTNAP3B-215	ENST00000619138	KIF14	Q15058	1648 aa		18.48	■□□□□ 0.55
CNTNAP3B-215	ENST00000619138	IPO9	Q96P70	1041 aa	Known RBP	18.47	■□□□□ 0.55
CNTNAP3B-215	ENST00000619138	MIA2	Q96PC5	1412 aa		18.47	■□□□□ 0.55
CNTNAP3B-215	ENST00000619138	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	18.46	■□□□□ 0.55	4e-8	■□□□□ 10.5
CNTNAP3B-215	ENST00000619138	GPATCH8	Q9UKJ3	1502 aa	Known RBP	18.45	■□□□□ 0.54
CNTNAP3B-215	ENST00000619138	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	18.45	■□□□□ 0.54
CNTNAP3B-215	ENST00000619138	SLC4A1AP	Q9BWU0	796 aa	Known RBP	18.44	■□□□□ 0.54
CNTNAP3B-215	ENST00000619138	CLASP1	Q7Z460	1538 aa		18.43	■□□□□ 0.54
CNTNAP3B-215	ENST00000619138	PRKRIP1	Q9H875	184 aa	Predicted RBP	18.41	■□□□□ 0.54
CNTNAP3B-215	ENST00000619138	TIMELESS	Q9UNS1	1208 aa		18.41	■□□□□ 0.54
CNTNAP3B-215	ENST00000619138	DAPK1	P53355	1430 aa		18.41	■□□□□ 0.54
CNTNAP3B-215	ENST00000619138	EFCAB2	Q5VUJ9	269 aa		18.41	■□□□□ 0.54
CNTNAP3B-215	ENST00000619138	NAIP	Q13075	1403 aa		18.4	■□□□□ 0.54
CNTNAP3B-215	ENST00000619138	AKNA	Q7Z591	1439 aa		18.4	■□□□□ 0.54
CNTNAP3B-215	ENST00000619138	CAMSAP2	Q08AD1	1489 aa		18.4	■□□□□ 0.54
CNTNAP3B-215	ENST00000619138	ABCC2	Q92887	1545 aa		18.4	■□□□□ 0.54
CNTNAP3B-215	ENST00000619138	ABCC5	O15440	1437 aa		18.39	■□□□□ 0.53
CNTNAP3B-215	ENST00000619138	C11orf95	C9JLR9	678 aa	Predicted RBP	18.39	■□□□□ 0.53
CNTNAP3B-215	ENST00000619138	SLC4A3	P48751	1232 aa		18.39	■□□□□ 0.53
CNTNAP3B-215	ENST00000619138	HFM1	A2PYH4	1435 aa		18.38	■□□□□ 0.53
CNTNAP3B-215	ENST00000619138	ARHGAP5	Q13017	1502 aa		18.38	■□□□□ 0.53
CNTNAP3B-215	ENST00000619138	SHROOM2	Q13796	1616 aa		18.38	■□□□□ 0.53
CNTNAP3B-215	ENST00000619138	SKAP1	Q86WV1	359 aa		18.37	■□□□□ 0.53
CNTNAP3B-215	ENST00000619138	MPHOSPH9	Q99550	1183 aa		18.37	■□□□□ 0.53
CNTNAP3B-215	ENST00000619138	TMC1	Q8TDI8	760 aa		18.36	■□□□□ 0.53
CNTNAP3B-215	ENST00000619138	ANKRD30A	Q9BXX3	1397 aa		18.35	■□□□□ 0.53
CNTNAP3B-215	ENST00000619138	L3MBTL2	Q969R5	705 aa		18.35	■□□□□ 0.53
CNTNAP3B-215	ENST00000619138	TCOF1	Q13428	1488 aa	Known RBP	18.33	■□□□□ 0.53
CNTNAP3B-215	ENST00000619138	ERICH6B	Q5W0A0	696 aa		18.33	■□□□□ 0.52
CNTNAP3B-215	ENST00000619138	AFAP1	Q8N556	730 aa		18.32	■□□□□ 0.52
CNTNAP3B-215	ENST00000619138	BRPF3	Q9ULD4	1205 aa		18.32	■□□□□ 0.52
CNTNAP3B-215	ENST00000619138	ZBED9	Q6R2W3	1325 aa		18.3	■□□□□ 0.52
CNTNAP3B-215	ENST00000619138	EXOC6	Q8TAG9	804 aa		18.28	■□□□□ 0.52
CNTNAP3B-215	ENST00000619138	ABCC10	Q5T3U5	1492 aa		18.28	■□□□□ 0.52
CNTNAP3B-215	ENST00000619138	PKD2	Q13563	968 aa		18.28	■□□□□ 0.52
CNTNAP3B-215	ENST00000619138	C9orf84	Q5VXU9	1444 aa		18.28	■□□□□ 0.52
CNTNAP3B-215	ENST00000619138	NUP155	O75694	1391 aa		18.27	■□□□□ 0.52
CNTNAP3B-215	ENST00000619138	ITSN2	Q9NZM3	1697 aa		18.27	■□□□□ 0.52
CNTNAP3B-215	ENST00000619138	KIF15	Q9NS87	1388 aa		18.26	■□□□□ 0.51
CNTNAP3B-215	ENST00000619138	NUDC	Q9Y266	331 aa		18.26	■□□□□ 0.51
CNTNAP3B-215	ENST00000619138	ASXL2	Q76L83	1435 aa		18.26	■□□□□ 0.51
CNTNAP3B-215	ENST00000619138	ZCCHC11	Q5TAX3	1644 aa	Known RBP	18.25	■□□□□ 0.51
CNTNAP3B-215	ENST00000619138	SENP3	Q9H4L4	574 aa	Predicted RBP	18.25	■□□□□ 0.51
CNTNAP3B-215	ENST00000619138	SPAG9	O60271	1321 aa	Known RBP	18.24	■□□□□ 0.51
CNTNAP3B-215	ENST00000619138	NCOA1	Q15788	1441 aa		18.24	■□□□□ 0.51

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