RNA–Protein interactions for RNA: ENST00000618666.4

CCNT1-205, Transcript of cyclin T1, humanhuman

TSL 2 BASIC

Gene CCNT1, Length 6,915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-205ENST00000618666 HSP90AB3PQ58FF7 597 aa6.95□□□□□ -1.3
CCNT1-205ENST00000618666 IPO4Q8TEX9 1081 aaKnown RBP6.95□□□□□ -1.3
CCNT1-205ENST00000618666 IGSF3O75054 1194 aa6.95□□□□□ -1.3
CCNT1-205ENST00000618666 MYH16Q9H6N6 1097 aa6.95□□□□□ -1.3
CCNT1-205ENST00000618666 NPHP1O15259 732 aa6.94□□□□□ -1.3
CCNT1-205ENST00000618666 CBX1P83916 185 aa6.94□□□□□ -1.3
CCNT1-205ENST00000618666 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.93□□□□□ -1.3
CCNT1-205ENST00000618666 ARID3CA6NKF2 412 aa6.93□□□□□ -1.3
CCNT1-205ENST00000618666 CCAR2Q8N163 923 aaKnown RBP6.92□□□□□ -1.3
CCNT1-205ENST00000618666 WDR43Q15061 677 aaKnown RBP eCLIP6.92□□□□□ -1.3
CCNT1-205ENST00000618666 NOL8Q76FK4 1167 aaKnown RBP6.92□□□□□ -1.3
CCNT1-205ENST00000618666 SRRTQ9BXP5 876 aaKnown RBP6.91□□□□□ -1.3
CCNT1-205ENST00000618666 FAM43AQ8N2R8 423 aa6.91□□□□□ -1.3
CCNT1-205ENST00000618666 NOC3LQ8WTT2 800 aaKnown RBP6.91□□□□□ -1.3
CCNT1-205ENST00000618666 NEUROD2Q15784 382 aa6.9□□□□□ -1.3
CCNT1-205ENST00000618666 KIAA2012Q0VF49 1180 aa6.9□□□□□ -1.3
CCNT1-205ENST00000618666 SPDYE4A6NLX3 237 aa6.87□□□□□ -1.31
CCNT1-205ENST00000618666 NFKBIBQ15653 356 aa6.87□□□□□ -1.31
CCNT1-205ENST00000618666 GOLGA6L1Q8N7Z2 621 aa6.87□□□□□ -1.31
CCNT1-205ENST00000618666 TOMM22Q9NS69 142 aa6.87□□□□□ -1.31
CCNT1-205ENST00000618666 ZRSR1Q15695 479 aaKnown RBP6.87□□□□□ -1.31
CCNT1-205ENST00000618666 TTLL5Q6EMB2 1281 aa6.87□□□□□ -1.31
CCNT1-205ENST00000618666 APBB1O00213 710 aa6.86□□□□□ -1.31
CCNT1-205ENST00000618666 FRAT2O75474 233 aaPredicted RBP6.86□□□□□ -1.31
CCNT1-205ENST00000618666 HSCBQ8IWL3 235 aa6.85□□□□□ -1.31
CCNT1-205ENST00000618666 GNL2Q13823 731 aaKnown RBP6.85□□□□□ -1.31
CCNT1-205ENST00000618666 MFAP1P55081 439 aaKnown RBP6.85□□□□□ -1.31
CCNT1-205ENST00000618666 OS9Q13438 667 aaPredicted RBP6.85□□□□□ -1.31
CCNT1-205ENST00000618666 SETQ01105 290 aaPredicted RBP6.85□□□□□ -1.31
CCNT1-205ENST00000618666 KCNJ4P48050 445 aa6.84□□□□□ -1.31
CCNT1-205ENST00000618666 IRX3P78415 501 aaPredicted RBP6.84□□□□□ -1.31
CCNT1-205ENST00000618666 KIAA1211Q6ZU35 1233 aa6.84□□□□□ -1.31
CCNT1-205ENST00000618666 TMX1Q9H3N1 280 aa6.84□□□□□ -1.31
CCNT1-205ENST00000618666 GOLGA6L6A8MZA4 724 aa6.84□□□□□ -1.31
CCNT1-205ENST00000618666 FGD1P98174 961 aa6.84□□□□□ -1.31
CCNT1-205ENST00000618666 MYO15BQ96JP2 1530 aa6.84□□□□□ -1.32
CCNT1-205ENST00000618666 RSPH4AQ5TD94 716 aa6.83□□□□□ -1.32
CCNT1-205ENST00000618666 FBXW7Q969H0 707 aa6.83□□□□□ -1.32
CCNT1-205ENST00000618666 RNF214Q8ND24 703 aa6.83□□□□□ -1.32
CCNT1-205ENST00000618666 CHMP3Q9Y3E7 222 aa6.83□□□□□ -1.32
CCNT1-205ENST00000618666 CREBRFQ8IUR6 639 aa6.83□□□□□ -1.32
CCNT1-205ENST00000618666 UQCRHLA0A096LP55 91 aa6.83□□□□□ -1.32
CCNT1-205ENST00000618666 RRP9O43818 475 aaKnown RBP6.83□□□□□ -1.32
CCNT1-205ENST00000618666 UQCRHP07919 91 aa6.83□□□□□ -1.32
CCNT1-205ENST00000618666 CC2D1BQ5T0F9 858 aaKnown RBP6.83□□□□□ -1.32
CCNT1-205ENST00000618666 MAP7D2Q96T17 732 aa6.82□□□□□ -1.32
CCNT1-205ENST00000618666 U2SURPO15042 1029 aaKnown RBP6.82□□□□□ -1.32
CCNT1-205ENST00000618666 GORABQ5T7V8 394 aa6.81□□□□□ -1.32
CCNT1-205ENST00000618666 KDM2AQ9Y2K7 1162 aa6.81□□□□□ -1.32
CCNT1-205ENST00000618666 PLIN1O60240 522 aa6.81□□□□□ -1.32
CCNT1-205ENST00000618666 GOLGA6L4A6NEF3 574 aa6.81□□□□□ -1.32
CCNT1-205ENST00000618666 SOX12O15370 315 aa6.81□□□□□ -1.32
CCNT1-205ENST00000618666 FANCIQ9NVI1 1328 aa6.81□□□□□ -1.32
CCNT1-205ENST00000618666 FTSJ3Q8IY81 847 aaKnown RBP6.8□□□□□ -1.32
CCNT1-205ENST00000618666 TICAM2Q86XR7 235 aa6.8□□□□□ -1.32
CCNT1-205ENST00000618666 FAM177BA6PVY3 158 aa6.8□□□□□ -1.32
CCNT1-205ENST00000618666 PDE4AP27815 886 aa6.8□□□□□ -1.32
CCNT1-205ENST00000618666 SKAP1Q86WV1 359 aa6.79□□□□□ -1.32
CCNT1-205ENST00000618666 CENPHQ9H3R5 247 aa6.78□□□□□ -1.32
CCNT1-205ENST00000618666 ZBTB12Q9Y330 459 aaPredicted RBP6.78□□□□□ -1.32
CCNT1-205ENST00000618666 DDX49Q9Y6V7 483 aaKnown RBP6.78□□□□□ -1.32
CCNT1-205ENST00000618666 PIK3R5Q8WYR1 880 aa6.78□□□□□ -1.32
CCNT1-205ENST00000618666 CALD1Q05682 793 aaKnown RBP6.78□□□□□ -1.32
CCNT1-205ENST00000618666 H0YHG0 523 aa6.77□□□□□ -1.33
CCNT1-205ENST00000618666 TONSLQ96HA7 1378 aa6.77□□□□□ -1.33
CCNT1-205ENST00000618666 ABCC9O60706 1549 aa6.77□□□□□ -1.33
CCNT1-205ENST00000618666 CNPY4Q8N129 248 aa6.76□□□□□ -1.33
CCNT1-205ENST00000618666 TRIM6-TRIM34B2RNG4 842 aa6.76□□□□□ -1.33
CCNT1-205ENST00000618666 CHMP4CQ96CF2 233 aa6.76□□□□□ -1.33
CCNT1-205ENST00000618666 TRIM34Q9BYJ4 488 aa6.76□□□□□ -1.33
CCNT1-205ENST00000618666 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.76□□□□□ -1.33
CCNT1-205ENST00000618666 AAMPQ13685 434 aa6.76□□□□□ -1.33
CCNT1-205ENST00000618666 GBP4Q96PP9 640 aa6.76□□□□□ -1.33
CCNT1-205ENST00000618666 PLPPR3Q6T4P5 718 aa6.76□□□□□ -1.33
CCNT1-205ENST00000618666 CHIC2Q9UKJ5 165 aa6.76□□□□□ -1.33
CCNT1-205ENST00000618666 SRPK2P78362 688 aaKnown RBP6.75□□□□□ -1.33
CCNT1-205ENST00000618666 POGKQ9P215 609 aa6.75□□□□□ -1.33
CCNT1-205ENST00000618666 XPCQ01831 940 aaPredicted RBP6.74□□□□□ -1.33
CCNT1-205ENST00000618666 SPC24Q8NBT2 197 aa6.74□□□□□ -1.33
CCNT1-205ENST00000618666 CCDC66A2RUB6 948 aa6.73□□□□□ -1.33
CCNT1-205ENST00000618666 GTF2A1P52655 376 aaPredicted RBP6.73□□□□□ -1.33
CCNT1-205ENST00000618666 EXOC6Q8TAG9 804 aa6.73□□□□□ -1.33
CCNT1-205ENST00000618666 IFT57Q9NWB7 429 aa6.73□□□□□ -1.33
CCNT1-205ENST00000618666 TPM2P07951 284 aa6.73□□□□□ -1.33
CCNT1-205ENST00000618666 RDXP35241 583 aaKnown RBP6.73□□□□□ -1.33
CCNT1-205ENST00000618666 DNAJC2Q99543 621 aaKnown RBP6.73□□□□□ -1.33
CCNT1-205ENST00000618666 GTF2F1P35269 517 aaKnown RBP eCLIP6.73□□□□□ -1.332e-9■■■■■ 28.8
CCNT1-205ENST00000618666 CLGNO14967 610 aa6.73□□□□□ -1.33
CCNT1-205ENST00000618666 POLR3GO15318 223 aaPredicted RBP6.73□□□□□ -1.33
CCNT1-205ENST00000618666 TEX35Q5T0J7 233 aa6.72□□□□□ -1.33
CCNT1-205ENST00000618666 STK11IPQ8N1F8 1099 aa6.72□□□□□ -1.33
CCNT1-205ENST00000618666 HSP90B1P14625 803 aaKnown RBP6.71□□□□□ -1.33
CCNT1-205ENST00000618666 FAM193AP78312 1265 aa6.71□□□□□ -1.33
CCNT1-205ENST00000618666 PPP4R3BQ5MIZ7 849 aa6.71□□□□□ -1.33
CCNT1-205ENST00000618666 CLUAP1Q96AJ1 413 aa6.71□□□□□ -1.33
CCNT1-205ENST00000618666 PDE6BP35913 854 aa6.71□□□□□ -1.34
CCNT1-205ENST00000618666 TSPYL1Q9H0U9 437 aa6.71□□□□□ -1.34
CCNT1-205ENST00000618666 NOM1Q5C9Z4 860 aaKnown RBP6.71□□□□□ -1.34
CCNT1-205ENST00000618666 CLSTN1O94985 981 aa6.71□□□□□ -1.34
CCNT1-205ENST00000618666 NASPP49321 788 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms