RNA–Protein interactions for RNA: ENST00000618227.1

MALAT1-213, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 593 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-213ENST00000618227 PREX2Q70Z35 1606 aa24.39■■□□□ 1.49
MALAT1-213ENST00000618227 FANCAO15360 1455 aa24.37■■□□□ 1.49
MALAT1-213ENST00000618227 ITSN2Q9NZM3 1697 aa24.37■■□□□ 1.49
MALAT1-213ENST00000618227 CDC42BPAQ5VT25 1732 aa24.36■■□□□ 1.49
MALAT1-213ENST00000618227 PPRC1Q5VV67 1664 aaKnown RBP24.35■■□□□ 1.49
MALAT1-213ENST00000618227 ARHGAP5Q13017 1502 aa24.35■■□□□ 1.49
MALAT1-213ENST00000618227 CFAP74Q9C0B2 1584 aa24.34■■□□□ 1.49
MALAT1-213ENST00000618227 PPARGC1BQ86YN6 1023 aaKnown RBP24.33■■□□□ 1.49
MALAT1-213ENST00000618227 CDC42BPBQ9Y5S2 1711 aa24.32■■□□□ 1.48
MALAT1-213ENST00000618227 PLEKHH2Q8IVE3 1493 aa24.32■■□□□ 1.48
MALAT1-213ENST00000618227 AKNAQ7Z591 1439 aa24.31■■□□□ 1.48
MALAT1-213ENST00000618227 FGD6Q6ZV73 1430 aa24.3■■□□□ 1.48
MALAT1-213ENST00000618227 KIAA1107Q9UPP5 1409 aa24.3■■□□□ 1.48
MALAT1-213ENST00000618227 SENP3Q9H4L4 574 aaPredicted RBP24.28■■□□□ 1.48
MALAT1-213ENST00000618227 TSPOAP1O95153 1857 aa24.28■■□□□ 1.48
MALAT1-213ENST00000618227 RSPH4AQ5TD94 716 aa24.26■■□□□ 1.47
MALAT1-213ENST00000618227 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.26■■□□□ 1.47
MALAT1-213ENST00000618227 TCOF1Q13428 1488 aaKnown RBP24.25■■□□□ 1.47
MALAT1-213ENST00000618227 ZNF777Q9ULD5 760 aaPredicted RBP24.24■■□□□ 1.47
MALAT1-213ENST00000618227 ADGRL1O94910 1474 aa24.24■■□□□ 1.47
MALAT1-213ENST00000618227 SAMD9LQ8IVG5 1584 aa24.22■■□□□ 1.47
MALAT1-213ENST00000618227 SCAPERQ9BY12 1400 aa24.22■■□□□ 1.47
MALAT1-213ENST00000618227 RRBP1Q9P2E9 1410 aaKnown RBP24.22■■□□□ 1.47
MALAT1-213ENST00000618227 ABCC1P33527 1531 aa24.21■■□□□ 1.47
MALAT1-213ENST00000618227 ZNF644Q9H582 1327 aaPredicted RBP24.21■■□□□ 1.47
MALAT1-213ENST00000618227 CAMSAP2Q08AD1 1489 aa24.2■■□□□ 1.47
MALAT1-213ENST00000618227 DENND4BO75064 1496 aaPredicted RBP24.19■■□□□ 1.46
MALAT1-213ENST00000618227 PTPN23Q9H3S7 1636 aa24.19■■□□□ 1.46
MALAT1-213ENST00000618227 MBD5Q9P267 1494 aa24.18■■□□□ 1.46
MALAT1-213ENST00000618227 ARHGEF12Q9NZN5 1544 aa24.15■■□□□ 1.46
MALAT1-213ENST00000618227 POGZQ7Z3K3 1410 aa24.15■■□□□ 1.46
MALAT1-213ENST00000618227 ZNF518AQ6AHZ1 1483 aa24.14■■□□□ 1.46
MALAT1-213ENST00000618227 COL17A1Q9UMD9 1497 aaPredicted RBP24.14■■□□□ 1.46
MALAT1-213ENST00000618227 HNRNPMP52272 730 aaKnown RBP eCLIP24.14■■□□□ 1.45
MALAT1-213ENST00000618227 ARHGEF5Q12774 1597 aa24.14■■□□□ 1.45
MALAT1-213ENST00000618227 SYCP2Q9BX26 1530 aa24.13■■□□□ 1.45
MALAT1-213ENST00000618227 TRAPPC8Q9Y2L5 1435 aa24.11■■□□□ 1.45
MALAT1-213ENST00000618227 FAM50AQ14320 339 aaKnown RBP24.11■■□□□ 1.45
MALAT1-213ENST00000618227 CCDC141Q6ZP82 1450 aa24.1■■□□□ 1.45
MALAT1-213ENST00000618227 KDM6BO15054 1643 aa24.1■■□□□ 1.45
MALAT1-213ENST00000618227 RAPGEF3O95398 923 aa24.09■■□□□ 1.45
MALAT1-213ENST00000618227 AFAP1Q8N556 730 aa24.09■■□□□ 1.45
MALAT1-213ENST00000618227 KDM5CP41229 1560 aa24.08■■□□□ 1.44
MALAT1-213ENST00000618227 MAGI2Q86UL8 1455 aa24.07■■□□□ 1.44
MALAT1-213ENST00000618227 TSPY4P0CV99 314 aa24.07■■□□□ 1.44
MALAT1-213ENST00000618227 TSPY10P0CW01 314 aa24.07■■□□□ 1.44
MALAT1-213ENST00000618227 ZMYM4Q5VZL5 1548 aa24.06■■□□□ 1.44
MALAT1-213ENST00000618227 RTEL1-TNFRSF6BF6WH68 1400 aa24.06■■□□□ 1.44
MALAT1-213ENST00000618227 ABCC5O15440 1437 aa24.06■■□□□ 1.44
MALAT1-213ENST00000618227 RICTORQ6R327 1708 aa24.06■■□□□ 1.44
MALAT1-213ENST00000618227 MLH3Q9UHC1 1453 aa24.06■■□□□ 1.44
MALAT1-213ENST00000618227 FRMPD1Q5SYB0 1578 aa24.04■■□□□ 1.44
MALAT1-213ENST00000618227 DAPK1P53355 1430 aa24.04■■□□□ 1.44
MALAT1-213ENST00000618227 DNMT1P26358 1616 aaKnown RBP24.04■■□□□ 1.44
MALAT1-213ENST00000618227 SHANK2Q9UPX8 1470 aa24.04■■□□□ 1.44
MALAT1-213ENST00000618227 SPAG9O60271 1321 aaKnown RBP24.04■■□□□ 1.44
MALAT1-213ENST00000618227 MAST1Q9Y2H9 1570 aa24■■□□□ 1.43
MALAT1-213ENST00000618227 C9orf84Q5VXU9 1444 aa23.98■■□□□ 1.43
MALAT1-213ENST00000618227 HECW2Q9P2P5 1572 aa23.96■■□□□ 1.43
MALAT1-213ENST00000618227 ROCK1Q13464 1354 aa23.95■■□□□ 1.42
MALAT1-213ENST00000618227 INO80Q9ULG1 1556 aaPredicted RBP23.95■■□□□ 1.42
MALAT1-213ENST00000618227 ATP7AQ04656 1500 aa23.94■■□□□ 1.42
MALAT1-213ENST00000618227 ADGRL2O95490 1459 aa23.94■■□□□ 1.42
MALAT1-213ENST00000618227 CROCC2H7BZ55 1655 aa23.93■■□□□ 1.42
MALAT1-213ENST00000618227 ZFYVE16Q7Z3T8 1539 aa23.93■■□□□ 1.42
MALAT1-213ENST00000618227 PTPRKQ15262 1439 aa23.93■■□□□ 1.42
MALAT1-213ENST00000618227 ANKRD30AQ9BXX3 1397 aa23.92■■□□□ 1.42
MALAT1-213ENST00000618227 TRIM26Q12899 539 aaPredicted RBP23.92■■□□□ 1.42
MALAT1-213ENST00000618227 NCOA1Q15788 1441 aa23.91■■□□□ 1.42
MALAT1-213ENST00000618227 KIDINS220Q9ULH0 1771 aa23.91■■□□□ 1.42
MALAT1-213ENST00000618227 MYT1LQ9UL68 1186 aa23.9■■□□□ 1.42
MALAT1-213ENST00000618227 ATP10AO60312 1499 aa23.89■■□□□ 1.42
MALAT1-213ENST00000618227 PLXNC1O60486 1568 aa23.88■■□□□ 1.41
MALAT1-213ENST00000618227 YEATS2Q9ULM3 1422 aa23.88■■□□□ 1.41
MALAT1-213ENST00000618227 ARHGEF40Q8TER5 1519 aa23.87■■□□□ 1.41
MALAT1-213ENST00000618227 ITGAEP38570 1179 aa23.86■■□□□ 1.41
MALAT1-213ENST00000618227 CHIC2Q9UKJ5 165 aa23.86■■□□□ 1.41
MALAT1-213ENST00000618227 REREQ9P2R6 1566 aa23.86■■□□□ 1.41
MALAT1-213ENST00000618227 DHX29Q7Z478 1369 aaKnown RBP23.85■■□□□ 1.41
MALAT1-213ENST00000618227 DIP2CQ9Y2E4 1556 aa23.84■■□□□ 1.41
MALAT1-213ENST00000618227 KIF15Q9NS87 1388 aa23.83■■□□□ 1.41
MALAT1-213ENST00000618227 A2MP01023 1474 aa23.82■■□□□ 1.4
MALAT1-213ENST00000618227 ABCA6Q8N139 1617 aa23.82■■□□□ 1.4
MALAT1-213ENST00000618227 PHF23Q9BUL5 403 aaPredicted RBP23.82■■□□□ 1.4
MALAT1-213ENST00000618227 ADGBQ8N7X0 1667 aa23.82■■□□□ 1.4
MALAT1-213ENST00000618227 DUOX2Q9NRD8 1548 aa23.81■■□□□ 1.4
MALAT1-213ENST00000618227 RRP7BPQ9NSQ0 103 aa23.81■■□□□ 1.4
MALAT1-213ENST00000618227 AGLP35573 1532 aa23.79■■□□□ 1.4
MALAT1-213ENST00000618227 HFM1A2PYH4 1435 aa23.78■■□□□ 1.4
MALAT1-213ENST00000618227 ERBINQ96RT1 1412 aa23.77■■□□□ 1.4
MALAT1-213ENST00000618227 ACIN1Q9UKV3 1341 aaKnown RBP23.75■■□□□ 1.39
MALAT1-213ENST00000618227 NAIPQ13075 1403 aa23.75■■□□□ 1.39
MALAT1-213ENST00000618227 ANKRD50Q9ULJ7 1429 aa23.74■■□□□ 1.39
MALAT1-213ENST00000618227 PPP6R1Q9UPN7 881 aa23.71■■□□□ 1.39
MALAT1-213ENST00000618227 HRCP23327 699 aa23.7■■□□□ 1.38
MALAT1-213ENST00000618227 BCORL1Q5H9F3 1711 aa23.7■■□□□ 1.38
MALAT1-213ENST00000618227 EIF2AK4Q9P2K8 1649 aaKnown RBP23.7■■□□□ 1.38
MALAT1-213ENST00000618227 SETD5Q9C0A6 1442 aa23.67■■□□□ 1.38
MALAT1-213ENST00000618227 KIF3BO15066 747 aa23.67■■□□□ 1.38
MALAT1-213ENST00000618227 GCC2Q8IWJ2 1684 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms