RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 PREX2Q70Z35 1606 aa24.56■■□□□ 1.52
SNAP47-213ENST00000617596 ARHGAP5Q13017 1502 aa24.56■■□□□ 1.52
SNAP47-213ENST00000617596 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.55■■□□□ 1.527e-10■■■■■ 69.8
SNAP47-213ENST00000617596 PLCH2O75038 1416 aa24.55■■□□□ 1.52
SNAP47-213ENST00000617596 CAMSAP2Q08AD1 1489 aa24.55■■□□□ 1.52
SNAP47-213ENST00000617596 ABCA9Q8IUA7 1624 aa24.55■■□□□ 1.52
SNAP47-213ENST00000617596 MYO5CQ9NQX4 1742 aa24.54■■□□□ 1.52
SNAP47-213ENST00000617596 FAM69CQ0P6D2 419 aa24.52■■□□□ 1.52
SNAP47-213ENST00000617596 PELP1Q8IZL8 1130 aaKnown RBP24.52■■□□□ 1.52
SNAP47-213ENST00000617596 PTPRKQ15262 1439 aa24.52■■□□□ 1.52
SNAP47-213ENST00000617596 CD109Q6YHK3 1445 aa24.5■■□□□ 1.51
SNAP47-213ENST00000617596 HNRNPMP52272 730 aaKnown RBP eCLIP24.49■■□□□ 1.511e-9■■■■■ 33
SNAP47-213ENST00000617596 EFCAB2Q5VUJ9 269 aa24.49■■□□□ 1.51
SNAP47-213ENST00000617596 CHIC2Q9UKJ5 165 aa24.49■■□□□ 1.51
SNAP47-213ENST00000617596 SAMD9LQ8IVG5 1584 aa24.48■■□□□ 1.51
SNAP47-213ENST00000617596 DIP2BQ9P265 1576 aa24.46■■□□□ 1.51
SNAP47-213ENST00000617596 ABCC5O15440 1437 aa24.45■■□□□ 1.5
SNAP47-213ENST00000617596 FANCAO15360 1455 aa24.44■■□□□ 1.5
SNAP47-213ENST00000617596 DAPK1P53355 1430 aa24.44■■□□□ 1.5
SNAP47-213ENST00000617596 SYCP2Q9BX26 1530 aa24.41■■□□□ 1.5
SNAP47-213ENST00000617596 ARAP3Q8WWN8 1544 aa24.4■■□□□ 1.5
SNAP47-213ENST00000617596 ARHGEF12Q9NZN5 1544 aa24.4■■□□□ 1.5
SNAP47-213ENST00000617596 GLI2P10070 1586 aa24.4■■□□□ 1.5
SNAP47-213ENST00000617596 MBD5Q9P267 1494 aa24.4■■□□□ 1.5
SNAP47-213ENST00000617596 DNMT1P26358 1616 aaKnown RBP24.4■■□□□ 1.5
SNAP47-213ENST00000617596 MAP3K4Q9Y6R4 1608 aa24.38■■□□□ 1.49
SNAP47-213ENST00000617596 RRP7BPQ9NSQ0 103 aa24.37■■□□□ 1.49
SNAP47-213ENST00000617596 ABCC1P33527 1531 aa24.35■■□□□ 1.49
SNAP47-213ENST00000617596 AKNAQ7Z591 1439 aa24.34■■□□□ 1.49
SNAP47-213ENST00000617596 KIAA1107Q9UPP5 1409 aa24.34■■□□□ 1.49
SNAP47-213ENST00000617596 PLEKHH2Q8IVE3 1493 aa24.33■■□□□ 1.49
SNAP47-213ENST00000617596 TRAPPC8Q9Y2L5 1435 aa24.33■■□□□ 1.48
SNAP47-213ENST00000617596 ADGRL1O94910 1474 aa24.33■■□□□ 1.48
SNAP47-213ENST00000617596 AFAP1Q8N556 730 aa24.32■■□□□ 1.48
SNAP47-213ENST00000617596 KIF13AQ9H1H9 1805 aa24.32■■□□□ 1.48
SNAP47-213ENST00000617596 CCDC141Q6ZP82 1450 aa24.32■■□□□ 1.48
SNAP47-213ENST00000617596 SCAPERQ9BY12 1400 aa24.32■■□□□ 1.48
SNAP47-213ENST00000617596 TSPY4P0CV99 314 aa24.31■■□□□ 1.48
SNAP47-213ENST00000617596 TSPY10P0CW01 314 aa24.31■■□□□ 1.48
SNAP47-213ENST00000617596 TSPOAP1O95153 1857 aa24.31■■□□□ 1.48
SNAP47-213ENST00000617596 ARHGEF5Q12774 1597 aa24.31■■□□□ 1.48
SNAP47-213ENST00000617596 TRHP20396 242 aaPredicted RBP24.29■■□□□ 1.48
SNAP47-213ENST00000617596 C9orf84Q5VXU9 1444 aa24.29■■□□□ 1.48
SNAP47-213ENST00000617596 RSPH4AQ5TD94 716 aa24.28■■□□□ 1.48
SNAP47-213ENST00000617596 SETD5Q9C0A6 1442 aa24.28■■□□□ 1.48
SNAP47-213ENST00000617596 RAB3GAP2Q9H2M9 1393 aa24.28■■□□□ 1.48
SNAP47-213ENST00000617596 CROCC2H7BZ55 1655 aa24.28■■□□□ 1.48
SNAP47-213ENST00000617596 NAIPQ13075 1403 aa24.27■■□□□ 1.48
SNAP47-213ENST00000617596 HFM1A2PYH4 1435 aa24.26■■□□□ 1.47
SNAP47-213ENST00000617596 NEO1Q92859 1461 aa24.24■■□□□ 1.47
SNAP47-213ENST00000617596 PPRC1Q5VV67 1664 aaKnown RBP24.24■■□□□ 1.47
SNAP47-213ENST00000617596 NCOA1Q15788 1441 aa24.24■■□□□ 1.47
SNAP47-213ENST00000617596 SHANK2Q9UPX8 1470 aa24.24■■□□□ 1.47
SNAP47-213ENST00000617596 ROCK1Q13464 1354 aa24.24■■□□□ 1.47
SNAP47-213ENST00000617596 CFAP74Q9C0B2 1584 aa24.23■■□□□ 1.47
SNAP47-213ENST00000617596 RAPGEF3O95398 923 aa24.23■■□□□ 1.47
SNAP47-213ENST00000617596 ANKRD30AQ9BXX3 1397 aa24.21■■□□□ 1.47
SNAP47-213ENST00000617596 ADGRL2O95490 1459 aa24.2■■□□□ 1.46
SNAP47-213ENST00000617596 SPAG9O60271 1321 aaKnown RBP24.19■■□□□ 1.46
SNAP47-213ENST00000617596 MYT1LQ9UL68 1186 aa24.18■■□□□ 1.46
SNAP47-213ENST00000617596 KDM6BO15054 1643 aa24.18■■□□□ 1.46
SNAP47-213ENST00000617596 TEX14Q8IWB6 1497 aa24.17■■□□□ 1.46
SNAP47-213ENST00000617596 ADGBQ8N7X0 1667 aa24.17■■□□□ 1.46
SNAP47-213ENST00000617596 POGZQ7Z3K3 1410 aa24.17■■□□□ 1.46
SNAP47-213ENST00000617596 KIF15Q9NS87 1388 aa24.16■■□□□ 1.46
SNAP47-213ENST00000617596 DENND4BO75064 1496 aaPredicted RBP24.15■■□□□ 1.46
SNAP47-213ENST00000617596 ZNF518AQ6AHZ1 1483 aa24.15■■□□□ 1.46
SNAP47-213ENST00000617596 CCER1Q8TC90 406 aaPredicted RBP24.14■■□□□ 1.46
SNAP47-213ENST00000617596 MAST1Q9Y2H9 1570 aa24.14■■□□□ 1.45
SNAP47-213ENST00000617596 GCC2Q8IWJ2 1684 aa24.13■■□□□ 1.45
SNAP47-213ENST00000617596 ZFYVE16Q7Z3T8 1539 aa24.12■■□□□ 1.45
SNAP47-213ENST00000617596 ANKRD50Q9ULJ7 1429 aa24.1■■□□□ 1.45
SNAP47-213ENST00000617596 COL17A1Q9UMD9 1497 aaPredicted RBP24.09■■□□□ 1.45
SNAP47-213ENST00000617596 RTEL1-TNFRSF6BF6WH68 1400 aa24.08■■□□□ 1.45
SNAP47-213ENST00000617596 ATP7AQ04656 1500 aa24.08■■□□□ 1.45
SNAP47-213ENST00000617596 KDM5CP41229 1560 aa24.07■■□□□ 1.44
SNAP47-213ENST00000617596 INO80Q9ULG1 1556 aaPredicted RBP24.07■■□□□ 1.44
SNAP47-213ENST00000617596 TRIM52Q96A61 297 aa24.06■■□□□ 1.44
SNAP47-213ENST00000617596 DHX57Q6P158 1386 aaKnown RBP24.06■■□□□ 1.44
SNAP47-213ENST00000617596 PLXNC1O60486 1568 aa24.05■■□□□ 1.44
SNAP47-213ENST00000617596 FRMPD1Q5SYB0 1578 aa24.05■■□□□ 1.44
SNAP47-213ENST00000617596 RICTORQ6R327 1708 aa24.05■■□□□ 1.44
SNAP47-213ENST00000617596 KIDINS220Q9ULH0 1771 aa24.04■■□□□ 1.44
SNAP47-213ENST00000617596 MLH3Q9UHC1 1453 aa24.02■■□□□ 1.44
SNAP47-213ENST00000617596 HECW2Q9P2P5 1572 aa24■■□□□ 1.43
SNAP47-213ENST00000617596 DUOX2Q9NRD8 1548 aa23.99■■□□□ 1.43
SNAP47-213ENST00000617596 YEATS2Q9ULM3 1422 aa23.99■■□□□ 1.43
SNAP47-213ENST00000617596 ABCA6Q8N139 1617 aa23.95■■□□□ 1.42
SNAP47-213ENST00000617596 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.94■■□□□ 1.42
SNAP47-213ENST00000617596 ERBINQ96RT1 1412 aa23.94■■□□□ 1.42
SNAP47-213ENST00000617596 DHX29Q7Z478 1369 aaKnown RBP23.93■■□□□ 1.42
SNAP47-213ENST00000617596 ZMYM4Q5VZL5 1548 aa23.92■■□□□ 1.42
SNAP47-213ENST00000617596 NUP155O75694 1391 aa23.92■■□□□ 1.42
SNAP47-213ENST00000617596 A2MP01023 1474 aa23.91■■□□□ 1.42
SNAP47-213ENST00000617596 KIF3BO15066 747 aa23.91■■□□□ 1.42
SNAP47-213ENST00000617596 MPHOSPH9Q99550 1183 aa23.91■■□□□ 1.42
SNAP47-213ENST00000617596 DIP2CQ9Y2E4 1556 aa23.9■■□□□ 1.42
SNAP47-213ENST00000617596 SLC4A1APQ9BWU0 796 aaKnown RBP23.89■■□□□ 1.42
SNAP47-213ENST00000617596 FOXD1Q16676 465 aa23.88■■□□□ 1.41
SNAP47-213ENST00000617596 PZPP20742 1482 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms