RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-222ENST00000617185 RRP7BPQ9NSQ0 103 aa15.76■□□□□ 0.11
TP53-222ENST00000617185 PTPRKQ15262 1439 aa15.76■□□□□ 0.11
TP53-222ENST00000617185 EIF4G3O43432 1585 aaKnown RBP15.75■□□□□ 0.11
TP53-222ENST00000617185 GLIPR1L2Q4G1C9 344 aa15.75■□□□□ 0.11
TP53-222ENST00000617185 MAPKBP1O60336 1514 aa15.75■□□□□ 0.11
TP53-222ENST00000617185 HIRIP3Q9BW71 556 aaPredicted RBP15.74■□□□□ 0.11
TP53-222ENST00000617185 RSPH6AQ9H0K4 717 aa15.74■□□□□ 0.11
TP53-222ENST00000617185 DAXXQ9UER7 740 aaPredicted RBP15.72■□□□□ 0.11
TP53-222ENST00000617185 PODXL2Q9NZ53 605 aa15.7■□□□□ 0.1
TP53-222ENST00000617185 GRIN2AQ12879 1464 aa15.69■□□□□ 0.1
TP53-222ENST00000617185 MYOM3Q5VTT5 1437 aa15.69■□□□□ 0.1
TP53-222ENST00000617185 B4GALNT3Q6L9W6 998 aa15.69■□□□□ 0.1
TP53-222ENST00000617185 EPRSP07814 1512 aaKnown RBP15.68■□□□□ 0.1
TP53-222ENST00000617185 HNRNPUQ00839 825 aaKnown RBP eCLIP15.68■□□□□ 0.1
TP53-222ENST00000617185 THOC2Q8NI27 1593 aaKnown RBP15.67■□□□□ 0.1
TP53-222ENST00000617185 ZNF644Q9H582 1327 aaPredicted RBP15.66■□□□□ 0.1
TP53-222ENST00000617185 NEFMP07197 916 aa15.66■□□□□ 0.1
TP53-222ENST00000617185 DISP1Q96F81 1524 aa15.66■□□□□ 0.1
TP53-222ENST00000617185 BRPF3Q9ULD4 1205 aa15.66■□□□□ 0.1
TP53-222ENST00000617185 PLEKHG5O94827 1062 aa15.65■□□□□ 0.1
TP53-222ENST00000617185 KIAA0586Q9BVV6 1533 aa15.65■□□□□ 0.1
TP53-222ENST00000617185 SUPT6HQ7KZ85 1726 aaKnown RBP15.65■□□□□ 0.1
TP53-222ENST00000617185 EHBP1L1Q8N3D4 1523 aa15.64■□□□□ 0.09
TP53-222ENST00000617185 HECW1Q76N89 1606 aa15.63■□□□□ 0.09
TP53-222ENST00000617185 CCDC18Q5T9S5 1454 aa15.63■□□□□ 0.09
TP53-222ENST00000617185 JPH4Q96JJ6 628 aa15.63■□□□□ 0.09
TP53-222ENST00000617185 ZNF777Q9ULD5 760 aaPredicted RBP15.63■□□□□ 0.09
TP53-222ENST00000617185 PLB1Q6P1J6 1458 aa15.62■□□□□ 0.09
TP53-222ENST00000617185 FOXD1Q16676 465 aa15.62■□□□□ 0.09
TP53-222ENST00000617185 TIMELESSQ9UNS1 1208 aa15.62■□□□□ 0.09
TP53-222ENST00000617185 CEP170Q5SW79 1584 aa15.61■□□□□ 0.09
TP53-222ENST00000617185 UGGT2Q9NYU1 1516 aa15.61■□□□□ 0.09
TP53-222ENST00000617185 KIAA0556O60303 1618 aa15.61■□□□□ 0.09
TP53-222ENST00000617185 PTPN23Q9H3S7 1636 aa15.61■□□□□ 0.09
TP53-222ENST00000617185 ZMYND15Q9H091 742 aa15.61■□□□□ 0.09
TP53-222ENST00000617185 PPM1GO15355 546 aaPredicted RBP15.59■□□□□ 0.09
TP53-222ENST00000617185 NAIPQ13075 1403 aa15.59■□□□□ 0.09
TP53-222ENST00000617185 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.59■□□□□ 0.09
TP53-222ENST00000617185 NUP153P49790 1475 aaKnown RBP15.58■□□□□ 0.09
TP53-222ENST00000617185 PRG4Q92954 1404 aaPredicted RBP15.58■□□□□ 0.08
TP53-222ENST00000617185 SYNJ2O15056 1496 aa15.58■□□□□ 0.08
TP53-222ENST00000617185 GSE1Q14687 1217 aa15.57■□□□□ 0.08
TP53-222ENST00000617185 VSIG10Q8N0Z9 540 aa15.56■□□□□ 0.08
TP53-222ENST00000617185 HFM1A2PYH4 1435 aa15.56■□□□□ 0.08
TP53-222ENST00000617185 MAGI1Q96QZ7 1491 aaPredicted RBP15.56■□□□□ 0.08
TP53-222ENST00000617185 FAM43AQ8N2R8 423 aa15.54■□□□□ 0.08
TP53-222ENST00000617185 LAS1LQ9Y4W2 734 aaKnown RBP15.54■□□□□ 0.08
TP53-222ENST00000617185 ARHGEF11O15085 1522 aa15.53■□□□□ 0.08
TP53-222ENST00000617185 KDM6BO15054 1643 aa15.53■□□□□ 0.08
TP53-222ENST00000617185 TONSLQ96HA7 1378 aa15.52■□□□□ 0.07
TP53-222ENST00000617185 RAPGEF6Q8TEU7 1601 aa15.51■□□□□ 0.07
TP53-222ENST00000617185 UACAQ9BZF9 1416 aa15.5■□□□□ 0.07
TP53-222ENST00000617185 CFDP1Q9UEE9 299 aaPredicted RBP15.5■□□□□ 0.07
TP53-222ENST00000617185 CARMIL2Q6F5E8 1435 aa15.47■□□□□ 0.07
TP53-222ENST00000617185 NUP160Q12769 1436 aa15.46■□□□□ 0.07
TP53-222ENST00000617185 MPHOSPH9Q99550 1183 aa15.45■□□□□ 0.06
TP53-222ENST00000617185 TCOF1Q13428 1488 aaKnown RBP15.45■□□□□ 0.06
TP53-222ENST00000617185 KIF14Q15058 1648 aa15.44■□□□□ 0.06
TP53-222ENST00000617185 PLEKHD1A6NEE1 506 aa15.44■□□□□ 0.06
TP53-222ENST00000617185 DAPK1P53355 1430 aa15.44■□□□□ 0.06
TP53-222ENST00000617185 ABCC5O15440 1437 aa15.43■□□□□ 0.06
TP53-222ENST00000617185 MIA2Q96PC5 1412 aa15.43■□□□□ 0.06
TP53-222ENST00000617185 DENND4BO75064 1496 aaPredicted RBP15.42■□□□□ 0.06
TP53-222ENST00000617185 TROQ12816 1431 aaPredicted RBP15.42■□□□□ 0.06
TP53-222ENST00000617185 NPM2Q86SE8 214 aaKnown RBP15.42■□□□□ 0.06
TP53-222ENST00000617185 FRAT1Q92837 279 aaPredicted RBP15.42■□□□□ 0.06
TP53-222ENST00000617185 SLC4A1APQ9BWU0 796 aaKnown RBP15.4■□□□□ 0.06
TP53-222ENST00000617185 ZBED9Q6R2W3 1325 aa15.4■□□□□ 0.06
TP53-222ENST00000617185 GPATCH8Q9UKJ3 1502 aaKnown RBP15.38■□□□□ 0.05
TP53-222ENST00000617185 PTPRGP23470 1445 aa15.38■□□□□ 0.05
TP53-222ENST00000617185 HNRNPMP52272 730 aaKnown RBP eCLIP15.37■□□□□ 0.05
TP53-222ENST00000617185 ATP10BO94823 1461 aa15.37■□□□□ 0.05
TP53-222ENST00000617185 CAMSAP2Q08AD1 1489 aa15.37■□□□□ 0.05
TP53-222ENST00000617185 RRP9O43818 475 aaKnown RBP15.37■□□□□ 0.05
TP53-222ENST00000617185 HSP90AA2PQ14568 343 aaPredicted RBP15.37■□□□□ 0.05
TP53-222ENST00000617185 L3MBTL2Q969R5 705 aa15.36■□□□□ 0.05
TP53-222ENST00000617185 NFKBIBQ15653 356 aa15.36■□□□□ 0.05
TP53-222ENST00000617185 CHD1O14646 1710 aa15.34■□□□□ 0.05
TP53-222ENST00000617185 GCC2Q8IWJ2 1684 aa15.34■□□□□ 0.05
TP53-222ENST00000617185 ZNF326Q5BKZ1 582 aaKnown RBP15.34■□□□□ 0.05
TP53-222ENST00000617185 ERCC6L2Q5T890 1561 aa15.34■□□□□ 0.05
TP53-222ENST00000617185 TCERG1O14776 1098 aaKnown RBP15.33■□□□□ 0.05
TP53-222ENST00000617185 DDRGK1Q96HY6 314 aa15.33■□□□□ 0.05
TP53-222ENST00000617185 DNMT1P26358 1616 aaKnown RBP15.32■□□□□ 0.04
TP53-222ENST00000617185 RNF123Q5XPI4 1314 aa15.3■□□□□ 0.04
TP53-222ENST00000617185 PDE4AP27815 886 aa15.3■□□□□ 0.04
TP53-222ENST00000617185 CNGB1Q14028 1251 aaPredicted RBP15.3■□□□□ 0.04
TP53-222ENST00000617185 ABCA8O94911 1581 aa15.3■□□□□ 0.04
TP53-222ENST00000617185 AKNAQ7Z591 1439 aa15.3■□□□□ 0.04
TP53-222ENST00000617185 HSPA5P11021 654 aaKnown RBP15.3■□□□□ 0.04
TP53-222ENST00000617185 KDM5BQ9UGL1 1544 aa15.29■□□□□ 0.04
TP53-222ENST00000617185 DCAF11Q8TEB1 546 aa15.29■□□□□ 0.04
TP53-222ENST00000617185 NCOA1Q15788 1441 aa15.28■□□□□ 0.04
TP53-222ENST00000617185 SMG6Q86US8 1419 aaKnown RBP15.28■□□□□ 0.04
TP53-222ENST00000617185 HSP90AA1P07900 732 aaKnown RBP15.28■□□□□ 0.04
TP53-222ENST00000617185 NBPF8Q3BBV2 869 aa15.28■□□□□ 0.04
TP53-222ENST00000617185 BACH2Q9BYV9 841 aa15.28■□□□□ 0.04
TP53-222ENST00000617185 PKD2Q13563 968 aa15.28■□□□□ 0.04
TP53-222ENST00000617185 FAM9BQ8IZU0 186 aa15.27■□□□□ 0.04
TP53-222ENST00000617185 ROCK1Q13464 1354 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms