RNA–Protein interactions for RNA: ENST00000617020.1

PCDH9-206, Transcript of protocadherin 9, humanhuman

TSL 5

Gene PCDH9, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-206ENST00000617020 MIER1Q8N108 512 aa11.87□□□□□ -0.51
PCDH9-206ENST00000617020 FAM163AQ96GL9 167 aaPredicted RBP11.86□□□□□ -0.51
PCDH9-206ENST00000617020 DIP2BQ9P265 1576 aa11.86□□□□□ -0.51
PCDH9-206ENST00000617020 CEP170Q5SW79 1584 aa11.85□□□□□ -0.51
PCDH9-206ENST00000617020 ADGRL1O94910 1474 aa11.85□□□□□ -0.51
PCDH9-206ENST00000617020 GRIN2BQ13224 1484 aa11.85□□□□□ -0.51
PCDH9-206ENST00000617020 TTLL13PA6NNM8 815 aa11.84□□□□□ -0.51
PCDH9-206ENST00000617020 FBXO41Q8TF61 875 aa11.84□□□□□ -0.51
PCDH9-206ENST00000617020 SOGA1O94964 1423 aa11.84□□□□□ -0.51
PCDH9-206ENST00000617020 CCDC88BA6NC98 1476 aa11.83□□□□□ -0.52
PCDH9-206ENST00000617020 ABCC10Q5T3U5 1492 aa11.83□□□□□ -0.52
PCDH9-206ENST00000617020 LMTK3Q96Q04 1460 aa11.83□□□□□ -0.52
PCDH9-206ENST00000617020 COLQQ9Y215 455 aaPredicted RBP11.82□□□□□ -0.52
PCDH9-206ENST00000617020 SHROOM2Q13796 1616 aa11.82□□□□□ -0.52
PCDH9-206ENST00000617020 FGD5Q6ZNL6 1462 aa11.8□□□□□ -0.52
PCDH9-206ENST00000617020 FAM69CQ0P6D2 419 aa11.79□□□□□ -0.52
PCDH9-206ENST00000617020 MAPKBP1O60336 1514 aa11.78□□□□□ -0.52
PCDH9-206ENST00000617020 SGIP1Q9BQI5 828 aa11.78□□□□□ -0.52
PCDH9-206ENST00000617020 SEC24BO95487 1268 aa11.77□□□□□ -0.53
PCDH9-206ENST00000617020 IER5LQ5T953 404 aa11.77□□□□□ -0.53
PCDH9-206ENST00000617020 TRIM35Q9UPQ4 493 aa11.75□□□□□ -0.53
PCDH9-206ENST00000617020 PCDHB13Q9Y5F0 798 aa11.75□□□□□ -0.53
PCDH9-206ENST00000617020 PLCD3Q8N3E9 789 aa11.74□□□□□ -0.53
PCDH9-206ENST00000617020 GRIN2AQ12879 1464 aa11.73□□□□□ -0.53
PCDH9-206ENST00000617020 ABCA5Q8WWZ7 1642 aa11.73□□□□□ -0.53
PCDH9-206ENST00000617020 NUBP1P53384 320 aa11.72□□□□□ -0.53
PCDH9-206ENST00000617020 ADCY10Q96PN6 1610 aa11.71□□□□□ -0.54
PCDH9-206ENST00000617020 NUP160Q12769 1436 aa11.7□□□□□ -0.54
PCDH9-206ENST00000617020 ADAMTS12P58397 1594 aa11.7□□□□□ -0.54
PCDH9-206ENST00000617020 PPRC1Q5VV67 1664 aaKnown RBP11.69□□□□□ -0.54
PCDH9-206ENST00000617020 SOCS7O14512 581 aa11.69□□□□□ -0.54
PCDH9-206ENST00000617020 ZBTB47Q9UFB7 747 aaPredicted RBP11.69□□□□□ -0.54
PCDH9-206ENST00000617020 IFNL1Q8IU54 200 aa11.68□□□□□ -0.54
PCDH9-206ENST00000617020 CUX1P39880 1505 aa11.68□□□□□ -0.54
PCDH9-206ENST00000617020 ILDR2Q71H61 639 aa11.66□□□□□ -0.54
PCDH9-206ENST00000617020 FAM212AQ96EL1 285 aa11.64□□□□□ -0.55
PCDH9-206ENST00000617020 TMEM106CQ9BVX2 250 aa11.64□□□□□ -0.55
PCDH9-206ENST00000617020 PRG4Q92954 1404 aaPredicted RBP11.63□□□□□ -0.55
PCDH9-206ENST00000617020 CDAN1Q8IWY9 1227 aa11.63□□□□□ -0.55
PCDH9-206ENST00000617020 SLAIN1Q8ND83 568 aa11.62□□□□□ -0.55
PCDH9-206ENST00000617020 TOP2BQ02880 1626 aa11.6□□□□□ -0.55
PCDH9-206ENST00000617020 ABCA10Q8WWZ4 1543 aa11.6□□□□□ -0.55
PCDH9-206ENST00000617020 PLCG2P16885 1265 aa11.59□□□□□ -0.55
PCDH9-206ENST00000617020 DISP3Q9P2K9 1392 aa11.58□□□□□ -0.56
PCDH9-206ENST00000617020 ST18O60284 1047 aa11.58□□□□□ -0.56
PCDH9-206ENST00000617020 IRX5P78411 483 aaPredicted RBP11.58□□□□□ -0.56
PCDH9-206ENST00000617020 RUSC2Q8N2Y8 1516 aa11.56□□□□□ -0.56
PCDH9-206ENST00000617020 COL17A1Q9UMD9 1497 aaPredicted RBP11.55□□□□□ -0.56
PCDH9-206ENST00000617020 SPATA31D1Q6ZQQ2 1576 aa11.54□□□□□ -0.56
PCDH9-206ENST00000617020 GLI2P10070 1586 aa11.53□□□□□ -0.56
PCDH9-206ENST00000617020 FHAD1B1AJZ9 1412 aa11.52□□□□□ -0.56
PCDH9-206ENST00000617020 KIF21BO75037 1637 aa11.5□□□□□ -0.57
PCDH9-206ENST00000617020 MAP3K4Q9Y6R4 1608 aa11.5□□□□□ -0.57
PCDH9-206ENST00000617020 OCEL1Q9H607 264 aa11.5□□□□□ -0.57
PCDH9-206ENST00000617020 CUL7Q14999 1698 aa11.49□□□□□ -0.57
PCDH9-206ENST00000617020 JPH4Q96JJ6 628 aa11.48□□□□□ -0.57
PCDH9-206ENST00000617020 PYGBP11216 843 aa11.47□□□□□ -0.57
PCDH9-206ENST00000617020 FKBP8Q14318 412 aa11.46□□□□□ -0.57
PCDH9-206ENST00000617020 DCAF8Q5TAQ9 597 aa11.46□□□□□ -0.57
PCDH9-206ENST00000617020 ERICH3Q5RHP9 1530 aa11.45□□□□□ -0.58
PCDH9-206ENST00000617020 TMEM121BQ9BXQ6 578 aaPredicted RBP11.45□□□□□ -0.58
PCDH9-206ENST00000617020 ASXL2Q76L83 1435 aa11.44□□□□□ -0.58
PCDH9-206ENST00000617020 PCDHB8Q9UN66 801 aa11.44□□□□□ -0.58
PCDH9-206ENST00000617020 PCF11O94913 1555 aaKnown RBP11.44□□□□□ -0.58
PCDH9-206ENST00000617020 TEX14Q8IWB6 1497 aa11.43□□□□□ -0.58
PCDH9-206ENST00000617020 SNPHO15079 494 aa11.42□□□□□ -0.58
PCDH9-206ENST00000617020 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.42□□□□□ -0.58
PCDH9-206ENST00000617020 PLB1Q6P1J6 1458 aa11.42□□□□□ -0.58
PCDH9-206ENST00000617020 ABCC2Q92887 1545 aa11.41□□□□□ -0.58
PCDH9-206ENST00000617020 ADAMTSL3P82987 1691 aa11.4□□□□□ -0.58
PCDH9-206ENST00000617020 PTPRMP28827 1452 aa11.39□□□□□ -0.59
PCDH9-206ENST00000617020 PDCD7Q8N8D1 485 aaKnown RBP11.38□□□□□ -0.59
PCDH9-206ENST00000617020 EPRSP07814 1512 aaKnown RBP11.38□□□□□ -0.59
PCDH9-206ENST00000617020 SPNS2Q8IVW8 549 aa11.37□□□□□ -0.59
PCDH9-206ENST00000617020 WRNQ14191 1432 aaPredicted RBP eCLIP11.36□□□□□ -0.59
PCDH9-206ENST00000617020 MMRN1Q13201 1228 aa11.36□□□□□ -0.59
PCDH9-206ENST00000617020 CERKQ8TCT0 537 aa11.36□□□□□ -0.59
PCDH9-206ENST00000617020 KIAA0586Q9BVV6 1533 aa11.35□□□□□ -0.59
PCDH9-206ENST00000617020 BIVM-ERCC5R4GMW8 1640 aa11.35□□□□□ -0.59
PCDH9-206ENST00000617020 MARVELD3Q96A59 401 aa11.35□□□□□ -0.59
PCDH9-206ENST00000617020 MADDQ8WXG6 1647 aa11.34□□□□□ -0.59
PCDH9-206ENST00000617020 FBXO3Q9UK99 471 aa11.33□□□□□ -0.6
PCDH9-206ENST00000617020 ZCCHC11Q5TAX3 1644 aaKnown RBP11.32□□□□□ -0.6
PCDH9-206ENST00000617020 ZNF467Q7Z7K2 595 aaPredicted RBP11.32□□□□□ -0.6
PCDH9-206ENST00000617020 PTPRGP23470 1445 aa11.31□□□□□ -0.6
PCDH9-206ENST00000617020 BCORL1Q5H9F3 1711 aa11.31□□□□□ -0.6
PCDH9-206ENST00000617020 C3orf67Q6ZVT6 689 aa11.3□□□□□ -0.6
PCDH9-206ENST00000617020 GSE1Q14687 1217 aa11.29□□□□□ -0.6
PCDH9-206ENST00000617020 UHRF1BP1LA0JNW5 1464 aa11.29□□□□□ -0.6
PCDH9-206ENST00000617020 RIMS1Q86UR5 1692 aaKnown RBP11.29□□□□□ -0.6
PCDH9-206ENST00000617020 CFAP43Q8NDM7 1665 aa11.29□□□□□ -0.6
PCDH9-206ENST00000617020 TTBK1Q5TCY1 1321 aaPredicted RBP11.29□□□□□ -0.6
PCDH9-206ENST00000617020 MKRN3Q13064 507 aaKnown RBP11.28□□□□□ -0.6
PCDH9-206ENST00000617020 L3MBTL3Q96JM7 780 aaPredicted RBP11.28□□□□□ -0.6
PCDH9-206ENST00000617020 GOLGA2Q08379 1002 aa11.27□□□□□ -0.61
PCDH9-206ENST00000617020 CHRM1P11229 460 aaPredicted RBP11.26□□□□□ -0.61
PCDH9-206ENST00000617020 KDM5BQ9UGL1 1544 aa11.25□□□□□ -0.61
PCDH9-206ENST00000617020 HSPA2P54652 639 aa11.25□□□□□ -0.61
PCDH9-206ENST00000617020 EMP3P54852 163 aa11.25□□□□□ -0.61
PCDH9-206ENST00000617020 TNIKQ9UKE5 1360 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms