RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 MTUS2Q5JR59 1369 aa35.28■■■■□ 3.24
CBWD3-212ENST00000616550 CDC42BPBQ9Y5S2 1711 aa35.27■■■■□ 3.24
CBWD3-212ENST00000616550 PREX2Q70Z35 1606 aa35.24■■■■□ 3.23
CBWD3-212ENST00000616550 POGZQ7Z3K3 1410 aa35.23■■■■□ 3.23
CBWD3-212ENST00000616550 CDC42BPAQ5VT25 1732 aa35.21■■■■□ 3.23
CBWD3-212ENST00000616550 VPS8Q8N3P4 1428 aa35.21■■■■□ 3.23
CBWD3-212ENST00000616550 ZMYM4Q5VZL5 1548 aa35.21■■■■□ 3.23
CBWD3-212ENST00000616550 MAGI2Q86UL8 1455 aa35.17■■■■□ 3.22
CBWD3-212ENST00000616550 ARHGEF40Q8TER5 1519 aa35.16■■■■□ 3.22
CBWD3-212ENST00000616550 ARID4BQ4LE39 1312 aaPredicted RBP35.14■■■■□ 3.22
CBWD3-212ENST00000616550 ZFYVE16Q7Z3T8 1539 aa35.14■■■■□ 3.22
CBWD3-212ENST00000616550 EHBP1L1Q8N3D4 1523 aa35.14■■■■□ 3.22
CBWD3-212ENST00000616550 CCNB3Q8WWL7 1395 aa35.13■■■■□ 3.21
CBWD3-212ENST00000616550 GPATCH8Q9UKJ3 1502 aaKnown RBP35.13■■■■□ 3.21
CBWD3-212ENST00000616550 ZNF518AQ6AHZ1 1483 aa35.13■■■■□ 3.21
CBWD3-212ENST00000616550 ZNF777Q9ULD5 760 aaPredicted RBP35.12■■■■□ 3.21
CBWD3-212ENST00000616550 AFAP1Q8N556 730 aa35.11■■■■□ 3.21
CBWD3-212ENST00000616550 YEATS2Q9ULM3 1422 aa35.1■■■■□ 3.21
CBWD3-212ENST00000616550 CFDP1Q9UEE9 299 aaPredicted RBP35.08■■■■□ 3.21
CBWD3-212ENST00000616550 ABCC1P33527 1531 aa35.07■■■■□ 3.21
CBWD3-212ENST00000616550 MYT1LQ9UL68 1186 aa35.07■■■■□ 3.2
CBWD3-212ENST00000616550 TIAM1Q13009 1591 aa35.06■■■■□ 3.2
CBWD3-212ENST00000616550 KDM5CP41229 1560 aa35.03■■■■□ 3.2
CBWD3-212ENST00000616550 ARHGEF12Q9NZN5 1544 aa35.02■■■■□ 3.2
CBWD3-212ENST00000616550 ITSN2Q9NZM3 1697 aa35.02■■■■□ 3.2
CBWD3-212ENST00000616550 TRAPPC8Q9Y2L5 1435 aa35.01■■■■□ 3.2
CBWD3-212ENST00000616550 SAMD9LQ8IVG5 1584 aa35■■■■□ 3.19
CBWD3-212ENST00000616550 ATP10AO60312 1499 aa35■■■■□ 3.19
CBWD3-212ENST00000616550 BCORL1Q5H9F3 1711 aa34.99■■■■□ 3.19
CBWD3-212ENST00000616550 SUPT6HQ7KZ85 1726 aaKnown RBP34.98■■■■□ 3.19
CBWD3-212ENST00000616550 ADAMTSL3P82987 1691 aa34.98■■■■□ 3.19
CBWD3-212ENST00000616550 HECW2Q9P2P5 1572 aa34.96■■■■□ 3.19
CBWD3-212ENST00000616550 PLEKHH2Q8IVE3 1493 aa34.96■■■■□ 3.19
CBWD3-212ENST00000616550 HNRNPMP52272 730 aaKnown RBP eCLIP34.95■■■■□ 3.19
CBWD3-212ENST00000616550 C9orf84Q5VXU9 1444 aa34.94■■■■□ 3.18
CBWD3-212ENST00000616550 NCOA2Q15596 1464 aa34.94■■■■□ 3.18
CBWD3-212ENST00000616550 LRRC9Q6ZRR7 1453 aa34.94■■■■□ 3.18
CBWD3-212ENST00000616550 MLH3Q9UHC1 1453 aa34.94■■■■□ 3.18
CBWD3-212ENST00000616550 MAP3K1Q13233 1512 aa34.94■■■■□ 3.18
CBWD3-212ENST00000616550 SYCP2Q9BX26 1530 aa34.93■■■■□ 3.18
CBWD3-212ENST00000616550 KIAA1107Q9UPP5 1409 aa34.92■■■■□ 3.18
CBWD3-212ENST00000616550 APLP2Q06481 763 aa34.91■■■■□ 3.18
CBWD3-212ENST00000616550 SIGLEC1Q9BZZ2 1709 aa34.89■■■■□ 3.18
CBWD3-212ENST00000616550 KANK4Q5T7N3 995 aaPredicted RBP34.86■■■■□ 3.17
CBWD3-212ENST00000616550 ZNF644Q9H582 1327 aaPredicted RBP34.85■■■■□ 3.17
CBWD3-212ENST00000616550 MADDQ8WXG6 1647 aa34.85■■■■□ 3.17
CBWD3-212ENST00000616550 MLECQ14165 292 aa34.85■■■■□ 3.17
CBWD3-212ENST00000616550 DIP2CQ9Y2E4 1556 aa34.85■■■■□ 3.17
CBWD3-212ENST00000616550 SPAG9O60271 1321 aaKnown RBP34.84■■■■□ 3.17
CBWD3-212ENST00000616550 PTPRMP28827 1452 aa34.84■■■■□ 3.17
CBWD3-212ENST00000616550 ABCA6Q8N139 1617 aa34.82■■■■□ 3.16
CBWD3-212ENST00000616550 KIDINS220Q9ULH0 1771 aa34.82■■■■□ 3.16
CBWD3-212ENST00000616550 RIMS1Q86UR5 1692 aaKnown RBP34.77■■■■□ 3.16
CBWD3-212ENST00000616550 REREQ9P2R6 1566 aa34.77■■■■□ 3.16
CBWD3-212ENST00000616550 MBD5Q9P267 1494 aa34.73■■■■□ 3.15
CBWD3-212ENST00000616550 ATP7AQ04656 1500 aa34.71■■■■□ 3.15
CBWD3-212ENST00000616550 CAMSAP2Q08AD1 1489 aa34.71■■■■□ 3.15
CBWD3-212ENST00000616550 FER1L4A9Z1Z3 1794 aa34.7■■■■□ 3.15
CBWD3-212ENST00000616550 RSPH4AQ5TD94 716 aa34.69■■■■□ 3.14
CBWD3-212ENST00000616550 AGLP35573 1532 aa34.68■■■■□ 3.14
CBWD3-212ENST00000616550 INO80Q9ULG1 1556 aaPredicted RBP34.67■■■■□ 3.14
CBWD3-212ENST00000616550 PLPPR3Q6T4P5 718 aa34.65■■■■□ 3.14
CBWD3-212ENST00000616550 MYOM3Q5VTT5 1437 aa34.64■■■■□ 3.14
CBWD3-212ENST00000616550 CCDC141Q6ZP82 1450 aa34.62■■■■□ 3.13
CBWD3-212ENST00000616550 RTEL1-TNFRSF6BF6WH68 1400 aa34.61■■■■□ 3.13
CBWD3-212ENST00000616550 MIA2Q96PC5 1412 aa34.61■■■■□ 3.13
CBWD3-212ENST00000616550 A2MP01023 1474 aa34.58■■■■□ 3.13
CBWD3-212ENST00000616550 ESF1Q9H501 851 aaKnown RBP34.58■■■■□ 3.13
CBWD3-212ENST00000616550 TSPY4P0CV99 314 aa34.57■■■■□ 3.12
CBWD3-212ENST00000616550 TSPY10P0CW01 314 aa34.57■■■■□ 3.12
CBWD3-212ENST00000616550 ARHGEF5Q12774 1597 aa34.56■■■■□ 3.12
CBWD3-212ENST00000616550 ADGBQ8N7X0 1667 aa34.56■■■■□ 3.12
CBWD3-212ENST00000616550 PLXNC1O60486 1568 aa34.5■■■■□ 3.11
CBWD3-212ENST00000616550 CEBPAP49715 358 aaPredicted RBP34.48■■■■□ 3.11
CBWD3-212ENST00000616550 DHX29Q7Z478 1369 aaKnown RBP34.46■■■■□ 3.11
CBWD3-212ENST00000616550 CNTLNQ9NXG0 1405 aa34.44■■■■□ 3.1
CBWD3-212ENST00000616550 GGT6Q6P531 493 aa34.43■■■■□ 3.1
CBWD3-212ENST00000616550 PTPN23Q9H3S7 1636 aa34.41■■■■□ 3.1
CBWD3-212ENST00000616550 FGD6Q6ZV73 1430 aa34.4■■■■□ 3.1
CBWD3-212ENST00000616550 LMTK3Q96Q04 1460 aa34.39■■■■□ 3.1
CBWD3-212ENST00000616550 MAST1Q9Y2H9 1570 aa34.37■■■■□ 3.09
CBWD3-212ENST00000616550 PPP6R1Q9UPN7 881 aa34.37■■■■□ 3.09
CBWD3-212ENST00000616550 C3P01024 1663 aa34.37■■■■□ 3.09
CBWD3-212ENST00000616550 SETD1BQ9UPS6 1966 aaKnown RBP34.35■■■■□ 3.09
CBWD3-212ENST00000616550 KIF3BO15066 747 aa34.35■■■■□ 3.09
CBWD3-212ENST00000616550 TCOF1Q13428 1488 aaKnown RBP34.32■■■■□ 3.08
CBWD3-212ENST00000616550 MROH2AA6NES4 1674 aa34.31■■■■□ 3.08
CBWD3-212ENST00000616550 ZMYM3Q14202 1370 aa34.3■■■■□ 3.08
CBWD3-212ENST00000616550 CLTCQ00610 1675 aaKnown RBP34.29■■■■□ 3.08
CBWD3-212ENST00000616550 ABCC5O15440 1437 aa34.29■■■■□ 3.08
CBWD3-212ENST00000616550 PREX1Q8TCU6 1659 aa34.28■■■■□ 3.08
CBWD3-212ENST00000616550 HSPA2P54652 639 aa34.27■■■■□ 3.08
CBWD3-212ENST00000616550 DAPK1P53355 1430 aa34.24■■■■□ 3.07
CBWD3-212ENST00000616550 DNMT1P26358 1616 aaKnown RBP34.24■■■■□ 3.07
CBWD3-212ENST00000616550 SHANK2Q9UPX8 1470 aa34.24■■■■□ 3.07
CBWD3-212ENST00000616550 CROCC2H7BZ55 1655 aa34.24■■■■□ 3.07
CBWD3-212ENST00000616550 FAM50AQ14320 339 aaKnown RBP34.23■■■■□ 3.07
CBWD3-212ENST00000616550 UHRF1BP1Q6BDS2 1440 aa34.22■■■■□ 3.07
CBWD3-212ENST00000616550 NPATQ14207 1427 aa34.18■■■■□ 3.06
CBWD3-212ENST00000616550 PPARGC1BQ86YN6 1023 aaKnown RBP34.17■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms