RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 MAPKBP1O60336 1514 aa19.14■□□□□ 0.66
FOXN3-219ENST00000615335 GPATCH8Q9UKJ3 1502 aaKnown RBP19.14■□□□□ 0.66
FOXN3-219ENST00000615335 CFDP1Q9UEE9 299 aaPredicted RBP19.14■□□□□ 0.65
FOXN3-219ENST00000615335 TTC37Q6PGP7 1564 aa19.14■□□□□ 0.65
FOXN3-219ENST00000615335 ITSN2Q9NZM3 1697 aa19.13■□□□□ 0.65
FOXN3-219ENST00000615335 CDC42BPAQ5VT25 1732 aa19.12■□□□□ 0.65
FOXN3-219ENST00000615335 MIA2Q96PC5 1412 aa19.11■□□□□ 0.65
FOXN3-219ENST00000615335 ERICH6Q7L0X2 663 aa19.11■□□□□ 0.65
FOXN3-219ENST00000615335 ZNF777Q9ULD5 760 aaPredicted RBP19.11■□□□□ 0.65
FOXN3-219ENST00000615335 PTPN23Q9H3S7 1636 aa19.1■□□□□ 0.65
FOXN3-219ENST00000615335 ITGAEP38570 1179 aa19.09■□□□□ 0.65
FOXN3-219ENST00000615335 MYO5CQ9NQX4 1742 aa19.08■□□□□ 0.65
FOXN3-219ENST00000615335 ZNF644Q9H582 1327 aaPredicted RBP19.07■□□□□ 0.64
FOXN3-219ENST00000615335 PREX2Q70Z35 1606 aa19.07■□□□□ 0.64
FOXN3-219ENST00000615335 ABCA9Q8IUA7 1624 aa19.06■□□□□ 0.64
FOXN3-219ENST00000615335 CDC42BPBQ9Y5S2 1711 aa19.06■□□□□ 0.64
FOXN3-219ENST00000615335 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.05■□□□□ 0.64
FOXN3-219ENST00000615335 ARHGAP5Q13017 1502 aa19.05■□□□□ 0.64
FOXN3-219ENST00000615335 PLCH2O75038 1416 aa19.04■□□□□ 0.64
FOXN3-219ENST00000615335 TCOF1Q13428 1488 aaKnown RBP19.04■□□□□ 0.64
FOXN3-219ENST00000615335 CAMSAP2Q08AD1 1489 aa19.02■□□□□ 0.64
FOXN3-219ENST00000615335 FAM69CQ0P6D2 419 aa19.02■□□□□ 0.63
FOXN3-219ENST00000615335 EFCAB2Q5VUJ9 269 aa19.01■□□□□ 0.63
FOXN3-219ENST00000615335 CD109Q6YHK3 1445 aa19.01■□□□□ 0.63
FOXN3-219ENST00000615335 DIP2BQ9P265 1576 aa18.99■□□□□ 0.63
FOXN3-219ENST00000615335 CLSPNQ9HAW4 1339 aa18.98■□□□□ 0.63
FOXN3-219ENST00000615335 ZNF316A6NFI3 1004 aaPredicted RBP18.98■□□□□ 0.63
FOXN3-219ENST00000615335 SAMD9LQ8IVG5 1584 aa18.97■□□□□ 0.63
FOXN3-219ENST00000615335 ARAP3Q8WWN8 1544 aa18.97■□□□□ 0.63
FOXN3-219ENST00000615335 GLI2P10070 1586 aa18.97■□□□□ 0.63
FOXN3-219ENST00000615335 FANCAO15360 1455 aa18.96■□□□□ 0.63
FOXN3-219ENST00000615335 HNRNPMP52272 730 aaKnown RBP eCLIP18.95■□□□□ 0.627e-7■■■■□ 20.3
FOXN3-219ENST00000615335 MAP3K4Q9Y6R4 1608 aa18.94■□□□□ 0.62
FOXN3-219ENST00000615335 CHIC2Q9UKJ5 165 aa18.92■□□□□ 0.62
FOXN3-219ENST00000615335 DAPK1P53355 1430 aa18.92■□□□□ 0.62
FOXN3-219ENST00000615335 PTPRKQ15262 1439 aa18.92■□□□□ 0.62
FOXN3-219ENST00000615335 DNMT1P26358 1616 aaKnown RBP18.92■□□□□ 0.62
FOXN3-219ENST00000615335 PLEKHH2Q8IVE3 1493 aa18.92■□□□□ 0.62
FOXN3-219ENST00000615335 ABCC5O15440 1437 aa18.91■□□□□ 0.62
FOXN3-219ENST00000615335 SYCP2Q9BX26 1530 aa18.91■□□□□ 0.62
FOXN3-219ENST00000615335 KIF13AQ9H1H9 1805 aa18.91■□□□□ 0.62
FOXN3-219ENST00000615335 TSPOAP1O95153 1857 aa18.9■□□□□ 0.62
FOXN3-219ENST00000615335 KIAA1107Q9UPP5 1409 aa18.89■□□□□ 0.61
FOXN3-219ENST00000615335 MBD5Q9P267 1494 aa18.89■□□□□ 0.61
FOXN3-219ENST00000615335 RSPH4AQ5TD94 716 aa18.88■□□□□ 0.61
FOXN3-219ENST00000615335 AKNAQ7Z591 1439 aa18.88■□□□□ 0.61
FOXN3-219ENST00000615335 ABCC1P33527 1531 aa18.88■□□□□ 0.61
FOXN3-219ENST00000615335 TSPY4P0CV99 314 aa18.88■□□□□ 0.61
FOXN3-219ENST00000615335 TSPY10P0CW01 314 aa18.88■□□□□ 0.61
FOXN3-219ENST00000615335 ARHGEF12Q9NZN5 1544 aa18.87■□□□□ 0.61
FOXN3-219ENST00000615335 ADGRL1O94910 1474 aa18.87■□□□□ 0.61
FOXN3-219ENST00000615335 CFAP74Q9C0B2 1584 aa18.87■□□□□ 0.61
FOXN3-219ENST00000615335 ARHGEF5Q12774 1597 aa18.86■□□□□ 0.61
FOXN3-219ENST00000615335 TRHP20396 242 aaPredicted RBP18.86■□□□□ 0.61
FOXN3-219ENST00000615335 CCDC141Q6ZP82 1450 aa18.86■□□□□ 0.61
FOXN3-219ENST00000615335 SCAPERQ9BY12 1400 aa18.85■□□□□ 0.61
FOXN3-219ENST00000615335 CROCC2H7BZ55 1655 aa18.84■□□□□ 0.61
FOXN3-219ENST00000615335 RRP7BPQ9NSQ0 103 aa18.84■□□□□ 0.61
FOXN3-219ENST00000615335 NEO1Q92859 1461 aa18.83■□□□□ 0.61
FOXN3-219ENST00000615335 TRAPPC8Q9Y2L5 1435 aa18.82■□□□□ 0.6
FOXN3-219ENST00000615335 AFAP1Q8N556 730 aa18.82■□□□□ 0.6
FOXN3-219ENST00000615335 C9orf84Q5VXU9 1444 aa18.82■□□□□ 0.6
FOXN3-219ENST00000615335 TEX14Q8IWB6 1497 aa18.81■□□□□ 0.6
FOXN3-219ENST00000615335 PPRC1Q5VV67 1664 aaKnown RBP18.81■□□□□ 0.6
FOXN3-219ENST00000615335 SHANK2Q9UPX8 1470 aa18.8■□□□□ 0.6
FOXN3-219ENST00000615335 SETD5Q9C0A6 1442 aa18.79■□□□□ 0.6
FOXN3-219ENST00000615335 ROCK1Q13464 1354 aa18.79■□□□□ 0.6
FOXN3-219ENST00000615335 HFM1A2PYH4 1435 aa18.78■□□□□ 0.6
FOXN3-219ENST00000615335 ADGBQ8N7X0 1667 aa18.78■□□□□ 0.6
FOXN3-219ENST00000615335 ANKRD30AQ9BXX3 1397 aa18.78■□□□□ 0.6
FOXN3-219ENST00000615335 NAIPQ13075 1403 aa18.77■□□□□ 0.6
FOXN3-219ENST00000615335 NCOA1Q15788 1441 aa18.77■□□□□ 0.6
FOXN3-219ENST00000615335 RAB3GAP2Q9H2M9 1393 aa18.77■□□□□ 0.59
FOXN3-219ENST00000615335 MYT1LQ9UL68 1186 aa18.76■□□□□ 0.59
FOXN3-219ENST00000615335 SPAG9O60271 1321 aaKnown RBP18.76■□□□□ 0.59
FOXN3-219ENST00000615335 ADGRL2O95490 1459 aa18.75■□□□□ 0.59
FOXN3-219ENST00000615335 ZNF518AQ6AHZ1 1483 aa18.75■□□□□ 0.59
FOXN3-219ENST00000615335 RAPGEF3O95398 923 aa18.75■□□□□ 0.59
FOXN3-219ENST00000615335 YTHDC1Q96MU7 727 aaKnown RBP18.74■□□□□ 0.59
FOXN3-219ENST00000615335 DENND4BO75064 1496 aaPredicted RBP18.74■□□□□ 0.59
FOXN3-219ENST00000615335 POGZQ7Z3K3 1410 aa18.74■□□□□ 0.59
FOXN3-219ENST00000615335 MAST1Q9Y2H9 1570 aa18.74■□□□□ 0.59
FOXN3-219ENST00000615335 GCC2Q8IWJ2 1684 aa18.73■□□□□ 0.59
FOXN3-219ENST00000615335 TSHZ2Q9NRE2 1034 aa18.72■□□□□ 0.59
FOXN3-219ENST00000615335 KIF15Q9NS87 1388 aa18.71■□□□□ 0.59
FOXN3-219ENST00000615335 RTEL1-TNFRSF6BF6WH68 1400 aa18.7■□□□□ 0.58
FOXN3-219ENST00000615335 ZFYVE16Q7Z3T8 1539 aa18.69■□□□□ 0.58
FOXN3-219ENST00000615335 ATP7AQ04656 1500 aa18.68■□□□□ 0.58
FOXN3-219ENST00000615335 RICTORQ6R327 1708 aa18.68■□□□□ 0.58
FOXN3-219ENST00000615335 KDM5CP41229 1560 aa18.68■□□□□ 0.58
FOXN3-219ENST00000615335 PLXNC1O60486 1568 aa18.67■□□□□ 0.58
FOXN3-219ENST00000615335 MIER1Q8N108 512 aa18.67■□□□□ 0.58
FOXN3-219ENST00000615335 INO80Q9ULG1 1556 aaPredicted RBP18.67■□□□□ 0.58
FOXN3-219ENST00000615335 DHX57Q6P158 1386 aaKnown RBP18.67■□□□□ 0.58
FOXN3-219ENST00000615335 KDM6BO15054 1643 aa18.67■□□□□ 0.58
FOXN3-219ENST00000615335 ANKRD50Q9ULJ7 1429 aa18.67■□□□□ 0.58
FOXN3-219ENST00000615335 KIDINS220Q9ULH0 1771 aa18.65■□□□□ 0.58
FOXN3-219ENST00000615335 MLH3Q9UHC1 1453 aa18.64■□□□□ 0.57
FOXN3-219ENST00000615335 HECW2Q9P2P5 1572 aa18.64■□□□□ 0.57
FOXN3-219ENST00000615335 SUPT16HQ9Y5B9 1047 aaKnown RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms