RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 YEATS2Q9ULM3 1422 aa29.32■■■□□ 2.28
SMN2-213ENST00000614240 MAGI2Q86UL8 1455 aa29.31■■■□□ 2.28
SMN2-213ENST00000614240 MLECQ14165 292 aa29.3■■■□□ 2.28
SMN2-213ENST00000614240 RIMS1Q86UR5 1692 aaKnown RBP29.28■■■□□ 2.28
SMN2-213ENST00000614240 CLIP1P30622 1438 aa29.25■■■□□ 2.27
SMN2-213ENST00000614240 PCF11O94913 1555 aaKnown RBP29.24■■■□□ 2.27
SMN2-213ENST00000614240 TROQ12816 1431 aaPredicted RBP29.24■■■□□ 2.27
SMN2-213ENST00000614240 KIF14Q15058 1648 aa29.21■■■□□ 2.27
SMN2-213ENST00000614240 MYO5CQ9NQX4 1742 aa29.21■■■□□ 2.27
SMN2-213ENST00000614240 MYT1LQ9UL68 1186 aa29.21■■■□□ 2.27
SMN2-213ENST00000614240 LMTK3Q96Q04 1460 aa29.2■■■□□ 2.26
SMN2-213ENST00000614240 ARHGAP5Q13017 1502 aa29.19■■■□□ 2.26
SMN2-213ENST00000614240 ATP10AO60312 1499 aa29.18■■■□□ 2.26
SMN2-213ENST00000614240 HSPA2P54652 639 aa29.15■■■□□ 2.26
SMN2-213ENST00000614240 AFAP1Q8N556 730 aa29.15■■■□□ 2.26
SMN2-213ENST00000614240 FBXO41Q8TF61 875 aa29.15■■■□□ 2.26
SMN2-213ENST00000614240 SIGLEC1Q9BZZ2 1709 aa29.14■■■□□ 2.26
SMN2-213ENST00000614240 C9orf84Q5VXU9 1444 aa29.14■■■□□ 2.26
SMN2-213ENST00000614240 ZNF518AQ6AHZ1 1483 aa29.13■■■□□ 2.25
SMN2-213ENST00000614240 CASKIN1Q8WXD9 1431 aa29.1■■■□□ 2.25
SMN2-213ENST00000614240 FER1L4A9Z1Z3 1794 aa29.07■■■□□ 2.24
SMN2-213ENST00000614240 CCDC18Q5T9S5 1454 aa29.07■■■□□ 2.24
SMN2-213ENST00000614240 LRRIQ1Q96JM4 1722 aa29.06■■■□□ 2.24
SMN2-213ENST00000614240 ARHGEF12Q9NZN5 1544 aa29.04■■■□□ 2.24
SMN2-213ENST00000614240 CEBPAP49715 358 aaPredicted RBP29.01■■■□□ 2.23
SMN2-213ENST00000614240 KDM5CP41229 1560 aa29.01■■■□□ 2.23
SMN2-213ENST00000614240 CDC42BPBQ9Y5S2 1711 aa28.97■■■□□ 2.23
SMN2-213ENST00000614240 ZNF777Q9ULD5 760 aaPredicted RBP28.96■■■□□ 2.23
SMN2-213ENST00000614240 TRAPPC8Q9Y2L5 1435 aa28.95■■■□□ 2.23
SMN2-213ENST00000614240 ESF1Q9H501 851 aaKnown RBP28.95■■■□□ 2.22
SMN2-213ENST00000614240 FYCO1Q9BQS8 1478 aa28.95■■■□□ 2.22
SMN2-213ENST00000614240 MLH3Q9UHC1 1453 aa28.95■■■□□ 2.22
SMN2-213ENST00000614240 PREX2Q70Z35 1606 aa28.94■■■□□ 2.22
SMN2-213ENST00000614240 DIP2CQ9Y2E4 1556 aa28.94■■■□□ 2.22
SMN2-213ENST00000614240 ABCC1P33527 1531 aa28.92■■■□□ 2.22
SMN2-213ENST00000614240 ABCA6Q8N139 1617 aa28.87■■■□□ 2.21
SMN2-213ENST00000614240 REREQ9P2R6 1566 aa28.87■■■□□ 2.21
SMN2-213ENST00000614240 ITSN2Q9NZM3 1697 aa28.86■■■□□ 2.21
SMN2-213ENST00000614240 PREX1Q8TCU6 1659 aa28.85■■■□□ 2.21
SMN2-213ENST00000614240 UHRF1BP1Q6BDS2 1440 aa28.85■■■□□ 2.21
SMN2-213ENST00000614240 CDC42BPAQ5VT25 1732 aa28.83■■■□□ 2.21
SMN2-213ENST00000614240 CERKQ8TCT0 537 aa28.83■■■□□ 2.21
SMN2-213ENST00000614240 AGLP35573 1532 aa28.83■■■□□ 2.21
SMN2-213ENST00000614240 HNRNPMP52272 730 aaKnown RBP eCLIP28.81■■■□□ 2.2
SMN2-213ENST00000614240 CFDP1Q9UEE9 299 aaPredicted RBP28.81■■■□□ 2.2
SMN2-213ENST00000614240 DMRT2Q9Y5R5 561 aa28.81■■■□□ 2.2
SMN2-213ENST00000614240 GPATCH8Q9UKJ3 1502 aaKnown RBP28.8■■■□□ 2.2
SMN2-213ENST00000614240 SPAG9O60271 1321 aaKnown RBP28.8■■■□□ 2.2
SMN2-213ENST00000614240 CCNB3Q8WWL7 1395 aa28.79■■■□□ 2.2
SMN2-213ENST00000614240 MTUS2Q5JR59 1369 aa28.77■■■□□ 2.2
SMN2-213ENST00000614240 KIDINS220Q9ULH0 1771 aa28.77■■■□□ 2.2
SMN2-213ENST00000614240 SYCP2Q9BX26 1530 aa28.76■■■□□ 2.19
SMN2-213ENST00000614240 SAMD9LQ8IVG5 1584 aa28.75■■■□□ 2.19
SMN2-213ENST00000614240 CNTLNQ9NXG0 1405 aa28.73■■■□□ 2.19
SMN2-213ENST00000614240 SETD1BQ9UPS6 1966 aaKnown RBP28.73■■■□□ 2.19
SMN2-213ENST00000614240 PLEKHH2Q8IVE3 1493 aa28.72■■■□□ 2.19
SMN2-213ENST00000614240 C3P01024 1663 aa28.71■■■□□ 2.19
SMN2-213ENST00000614240 KIAA1107Q9UPP5 1409 aa28.7■■■□□ 2.19
SMN2-213ENST00000614240 ATP7AQ04656 1500 aa28.65■■■□□ 2.18
SMN2-213ENST00000614240 STRCQ7RTU9 1775 aa28.64■■■□□ 2.18
SMN2-213ENST00000614240 ZMYM3Q14202 1370 aa28.62■■■□□ 2.17
SMN2-213ENST00000614240 A2MP01023 1474 aa28.61■■■□□ 2.17
SMN2-213ENST00000614240 SUPT6HQ7KZ85 1726 aaKnown RBP28.61■■■□□ 2.17
SMN2-213ENST00000614240 GGT6Q6P531 493 aa28.61■■■□□ 2.17
SMN2-213ENST00000614240 ZNF644Q9H582 1327 aaPredicted RBP28.61■■■□□ 2.17
SMN2-213ENST00000614240 PTPRTO14522 1441 aa28.59■■■□□ 2.17
SMN2-213ENST00000614240 NPATQ14207 1427 aa28.58■■■□□ 2.17
SMN2-213ENST00000614240 CEP162Q5TB80 1403 aa28.57■■■□□ 2.16
SMN2-213ENST00000614240 EHBP1L1Q8N3D4 1523 aa28.57■■■□□ 2.16
SMN2-213ENST00000614240 INO80Q9ULG1 1556 aaPredicted RBP28.57■■■□□ 2.16
SMN2-213ENST00000614240 MROH2AA6NES4 1674 aa28.54■■■□□ 2.16
SMN2-213ENST00000614240 TIAM1Q13009 1591 aa28.54■■■□□ 2.16
SMN2-213ENST00000614240 PLXNC1O60486 1568 aa28.52■■■□□ 2.16
SMN2-213ENST00000614240 NCOA1Q15788 1441 aa28.52■■■□□ 2.16
SMN2-213ENST00000614240 PPP6R1Q9UPN7 881 aa28.5■■■□□ 2.15
SMN2-213ENST00000614240 CLTCQ00610 1675 aaKnown RBP28.48■■■□□ 2.15
SMN2-213ENST00000614240 MBD5Q9P267 1494 aa28.48■■■□□ 2.15
SMN2-213ENST00000614240 CAMSAP1Q5T5Y3 1602 aa28.47■■■□□ 2.15
SMN2-213ENST00000614240 NCKAP5LQ9HCH0 1330 aa28.45■■■□□ 2.15
SMN2-213ENST00000614240 ADGBQ8N7X0 1667 aa28.45■■■□□ 2.15
SMN2-213ENST00000614240 RTEL1-TNFRSF6BF6WH68 1400 aa28.45■■■□□ 2.15
SMN2-213ENST00000614240 PTPRKQ15262 1439 aa28.44■■■□□ 2.14
SMN2-213ENST00000614240 DHX29Q7Z478 1369 aaKnown RBP28.42■■■□□ 2.14
SMN2-213ENST00000614240 RSPH4AQ5TD94 716 aa28.42■■■□□ 2.14
SMN2-213ENST00000614240 NCOA2Q15596 1464 aa28.41■■■□□ 2.14
SMN2-213ENST00000614240 KIF3BO15066 747 aa28.41■■■□□ 2.14
SMN2-213ENST00000614240 PKD2Q13563 968 aa28.38■■■□□ 2.13
SMN2-213ENST00000614240 CCDC141Q6ZP82 1450 aa28.38■■■□□ 2.13
SMN2-213ENST00000614240 CAMSAP2Q08AD1 1489 aa28.37■■■□□ 2.13
SMN2-213ENST00000614240 LTBP4Q8N2S1 1624 aa28.36■■■□□ 2.13
SMN2-213ENST00000614240 MYO3AQ8NEV4 1616 aa28.36■■■□□ 2.13
SMN2-213ENST00000614240 TSPY4P0CV99 314 aa28.35■■■□□ 2.13
SMN2-213ENST00000614240 TSPY10P0CW01 314 aa28.35■■■□□ 2.13
SMN2-213ENST00000614240 CEP170BQ9Y4F5 1589 aaPredicted RBP28.34■■■□□ 2.13
SMN2-213ENST00000614240 LOC105371045A0A1W2PR82 267 aa28.33■■■□□ 2.13
SMN2-213ENST00000614240 PLA2R1Q13018 1463 aa28.33■■■□□ 2.13
SMN2-213ENST00000614240 ZNF335Q9H4Z2 1342 aaPredicted RBP28.32■■■□□ 2.12
SMN2-213ENST00000614240 WASHC2CQ9Y4E1 1318 aa28.31■■■□□ 2.12
SMN2-213ENST00000614240 ZNF142P52746 1687 aaPredicted RBP28.31■■■□□ 2.12
SMN2-213ENST00000614240 IQSEC2Q5JU85 1478 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms