RNA–Protein interactions for RNA: ENST00000614132.4

PSMB3-209, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 426 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-209ENST00000614132 CARMIL1Q5VZK9 1371 aa8.65□□□□□ -1.02
PSMB3-209ENST00000614132 EFCAB5A4FU69 1503 aa8.64□□□□□ -1.03
PSMB3-209ENST00000614132 MAGI2Q86UL8 1455 aa8.64□□□□□ -1.03
PSMB3-209ENST00000614132 PKD2Q13563 968 aa8.64□□□□□ -1.03
PSMB3-209ENST00000614132 KIAA0556O60303 1618 aa8.64□□□□□ -1.03
PSMB3-209ENST00000614132 CAMSAP1Q5T5Y3 1602 aa8.64□□□□□ -1.03
PSMB3-209ENST00000614132 UGGT2Q9NYU1 1516 aa8.64□□□□□ -1.03
PSMB3-209ENST00000614132 PTPRKQ15262 1439 aa8.63□□□□□ -1.03
PSMB3-209ENST00000614132 PPP6R1Q9UPN7 881 aa8.63□□□□□ -1.03
PSMB3-209ENST00000614132 ABCA8O94911 1581 aa8.63□□□□□ -1.03
PSMB3-209ENST00000614132 ZMYM4Q5VZL5 1548 aa8.63□□□□□ -1.03
PSMB3-209ENST00000614132 RICTORQ6R327 1708 aa8.63□□□□□ -1.03
PSMB3-209ENST00000614132 ARID3CA6NKF2 412 aa8.62□□□□□ -1.03
PSMB3-209ENST00000614132 IFFO2Q5TF58 517 aa8.62□□□□□ -1.03
PSMB3-209ENST00000614132 SETD1AO15047 1707 aaKnown RBP8.62□□□□□ -1.03
PSMB3-209ENST00000614132 ATP10AO60312 1499 aa8.61□□□□□ -1.03
PSMB3-209ENST00000614132 ALKQ9UM73 1620 aa8.6□□□□□ -1.03
PSMB3-209ENST00000614132 KIF27Q86VH2 1401 aa8.6□□□□□ -1.03
PSMB3-209ENST00000614132 ATP10BO94823 1461 aa8.59□□□□□ -1.03
PSMB3-209ENST00000614132 C9orf84Q5VXU9 1444 aa8.59□□□□□ -1.03
PSMB3-209ENST00000614132 CPS1P31327 1500 aa8.59□□□□□ -1.03
PSMB3-209ENST00000614132 TCOF1Q13428 1488 aaKnown RBP8.57□□□□□ -1.04
PSMB3-209ENST00000614132 HECW1Q76N89 1606 aa8.57□□□□□ -1.04
PSMB3-209ENST00000614132 PLA2R1Q13018 1463 aa8.57□□□□□ -1.04
PSMB3-209ENST00000614132 ESF1Q9H501 851 aaKnown RBP8.56□□□□□ -1.04
PSMB3-209ENST00000614132 SHANK2Q9UPX8 1470 aa8.56□□□□□ -1.04
PSMB3-209ENST00000614132 C3P01024 1663 aa8.56□□□□□ -1.04
PSMB3-209ENST00000614132 RAPGEF2Q9Y4G8 1499 aa8.55□□□□□ -1.04
PSMB3-209ENST00000614132 TRIM52Q96A61 297 aa8.53□□□□□ -1.04
PSMB3-209ENST00000614132 NPATQ14207 1427 aa8.53□□□□□ -1.04
PSMB3-209ENST00000614132 SCAPERQ9BY12 1400 aa8.52□□□□□ -1.05
PSMB3-209ENST00000614132 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.5□□□□□ -1.05
PSMB3-209ENST00000614132 HNRNPUL2Q1KMD3 747 aaKnown RBP8.5□□□□□ -1.05
PSMB3-209ENST00000614132 RBM33Q96EV2 1170 aaKnown RBP8.5□□□□□ -1.05
PSMB3-209ENST00000614132 GOLGA3Q08378 1498 aa8.5□□□□□ -1.05
PSMB3-209ENST00000614132 CFAP74Q9C0B2 1584 aa8.49□□□□□ -1.05
PSMB3-209ENST00000614132 CNTLNQ9NXG0 1405 aa8.49□□□□□ -1.05
PSMB3-209ENST00000614132 FAM9AQ8IZU1 332 aaPredicted RBP8.49□□□□□ -1.05
PSMB3-209ENST00000614132 ZRANB1Q9UGI0 708 aa8.49□□□□□ -1.05
PSMB3-209ENST00000614132 ZMYM3Q14202 1370 aa8.47□□□□□ -1.05
PSMB3-209ENST00000614132 AGLP35573 1532 aa8.46□□□□□ -1.05
PSMB3-209ENST00000614132 FOXD1Q16676 465 aa8.46□□□□□ -1.06
PSMB3-209ENST00000614132 PLEKHD1A6NEE1 506 aa8.45□□□□□ -1.06
PSMB3-209ENST00000614132 RXRBP28702 533 aa8.45□□□□□ -1.06
PSMB3-209ENST00000614132 ZNF772Q68DY9 489 aaPredicted RBP8.45□□□□□ -1.06
PSMB3-209ENST00000614132 LRRC7Q96NW7 1537 aa8.44□□□□□ -1.06
PSMB3-209ENST00000614132 VWDEQ8N2E2 1590 aa8.44□□□□□ -1.06
PSMB3-209ENST00000614132 SETBP1Q9Y6X0 1596 aa8.44□□□□□ -1.06
PSMB3-209ENST00000614132 MYT1LQ9UL68 1186 aa8.44□□□□□ -1.06
PSMB3-209ENST00000614132 FAM135BQ49AJ0 1406 aa8.44□□□□□ -1.06
PSMB3-209ENST00000614132 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.44□□□□□ -1.06
PSMB3-209ENST00000614132 CEP170BQ9Y4F5 1589 aaPredicted RBP8.44□□□□□ -1.06
PSMB3-209ENST00000614132 AFAP1Q8N556 730 aa8.43□□□□□ -1.06
PSMB3-209ENST00000614132 P3H3Q8IVL6 736 aa8.42□□□□□ -1.06
PSMB3-209ENST00000614132 REREQ9P2R6 1566 aa8.42□□□□□ -1.06
PSMB3-209ENST00000614132 ZNF142P52746 1687 aaPredicted RBP8.42□□□□□ -1.06
PSMB3-209ENST00000614132 RNF17Q9BXT8 1623 aaKnown RBP8.41□□□□□ -1.06
PSMB3-209ENST00000614132 NEURL4Q96JN8 1562 aa8.41□□□□□ -1.06
PSMB3-209ENST00000614132 MYO3AQ8NEV4 1616 aa8.4□□□□□ -1.06
PSMB3-209ENST00000614132 CDK12Q9NYV4 1490 aaPredicted RBP8.4□□□□□ -1.06
PSMB3-209ENST00000614132 PLCH2O75038 1416 aa8.4□□□□□ -1.06
PSMB3-209ENST00000614132 ANKLE2Q86XL3 938 aa8.4□□□□□ -1.06
PSMB3-209ENST00000614132 DIP2CQ9Y2E4 1556 aa8.39□□□□□ -1.07
PSMB3-209ENST00000614132 ZNF518AQ6AHZ1 1483 aa8.39□□□□□ -1.07
PSMB3-209ENST00000614132 EFCAB2Q5VUJ9 269 aa8.39□□□□□ -1.07
PSMB3-209ENST00000614132 A2ML1A8K2U0 1454 aa8.38□□□□□ -1.07
PSMB3-209ENST00000614132 SUPT6HQ7KZ85 1726 aaKnown RBP8.38□□□□□ -1.07
PSMB3-209ENST00000614132 JCADQ9P266 1359 aa8.37□□□□□ -1.07
PSMB3-209ENST00000614132 NPHP4O75161 1426 aaPredicted RBP8.37□□□□□ -1.07
PSMB3-209ENST00000614132 MROH2AA6NES4 1674 aa8.37□□□□□ -1.07
PSMB3-209ENST00000614132 DNMT1P26358 1616 aaKnown RBP8.36□□□□□ -1.07
PSMB3-209ENST00000614132 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.36□□□□□ -1.07
PSMB3-209ENST00000614132 KDM5CP41229 1560 aa8.36□□□□□ -1.07
PSMB3-209ENST00000614132 YY1P25490 414 aa8.36□□□□□ -1.07
PSMB3-209ENST00000614132 MEX3CQ5U5Q3 659 aaKnown RBP8.36□□□□□ -1.07
PSMB3-209ENST00000614132 NUP153P49790 1475 aaKnown RBP8.36□□□□□ -1.07
PSMB3-209ENST00000614132 MED14O60244 1454 aa8.35□□□□□ -1.07
PSMB3-209ENST00000614132 MLH3Q9UHC1 1453 aa8.35□□□□□ -1.07
PSMB3-209ENST00000614132 NUTM2BA6NNL0 878 aaPredicted RBP8.35□□□□□ -1.07
PSMB3-209ENST00000614132 NUTM2EB1AL46 878 aaPredicted RBP8.35□□□□□ -1.07
PSMB3-209ENST00000614132 NUTM2DQ5VT03 806 aaPredicted RBP8.35□□□□□ -1.07
PSMB3-209ENST00000614132 NUTM2AQ8IVF1 878 aaPredicted RBP8.35□□□□□ -1.07
PSMB3-209ENST00000614132 RAPGEF6Q8TEU7 1601 aa8.34□□□□□ -1.07
PSMB3-209ENST00000614132 ABCA6Q8N139 1617 aa8.33□□□□□ -1.08
PSMB3-209ENST00000614132 SYNMO15061 1565 aa8.33□□□□□ -1.08
PSMB3-209ENST00000614132 POLR1AO95602 1720 aaPredicted RBP8.33□□□□□ -1.08
PSMB3-209ENST00000614132 STRCP1A6NGW2 1772 aa8.33□□□□□ -1.08
PSMB3-209ENST00000614132 LRP6O75581 1613 aa8.32□□□□□ -1.08
PSMB3-209ENST00000614132 SPATA31A6Q5VVP1 1343 aa8.32□□□□□ -1.08
PSMB3-209ENST00000614132 RGS12O14924 1447 aa8.32□□□□□ -1.08
PSMB3-209ENST00000614132 THEMISQ8N1K5 641 aaPredicted RBP8.32□□□□□ -1.08
PSMB3-209ENST00000614132 CDK13Q14004 1512 aaKnown RBP8.32□□□□□ -1.08
PSMB3-209ENST00000614132 ATAD2Q6PL18 1390 aa8.31□□□□□ -1.08
PSMB3-209ENST00000614132 CTTNBP2Q8WZ74 1663 aa8.3□□□□□ -1.08
PSMB3-209ENST00000614132 SENP3-EIF4A1A0A087X0R7 540 aa8.29□□□□□ -1.08
PSMB3-209ENST00000614132 RBM6P78332 1123 aaKnown RBP8.29□□□□□ -1.08
PSMB3-209ENST00000614132 ABCC1P33527 1531 aa8.29□□□□□ -1.08
PSMB3-209ENST00000614132 ROBO1Q9Y6N7 1651 aa8.28□□□□□ -1.08
PSMB3-209ENST00000614132 CCDC125Q86Z20 511 aa8.28□□□□□ -1.08
PSMB3-209ENST00000614132 LRP5O75197 1615 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms