RNA–Protein interactions for RNA: ENST00000613942.2

CRNDE-212, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 5 BASIC

Gene CRNDE, Length 2,601 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-212ENST00000613942 CDK11AQ9UQ88 783 aaPredicted RBP8.96□□□□□ -0.97
CRNDE-212ENST00000613942 SUPT6HQ7KZ85 1726 aaKnown RBP8.96□□□□□ -0.97
CRNDE-212ENST00000613942 FGD6Q6ZV73 1430 aa8.96□□□□□ -0.98
CRNDE-212ENST00000613942 ARHGEF11O15085 1522 aa8.95□□□□□ -0.98
CRNDE-212ENST00000613942 MYOM3Q5VTT5 1437 aa8.95□□□□□ -0.98
CRNDE-212ENST00000613942 TROQ12816 1431 aaPredicted RBP8.94□□□□□ -0.98
CRNDE-212ENST00000613942 PLEKHD1A6NEE1 506 aa8.94□□□□□ -0.98
CRNDE-212ENST00000613942 ABCC2Q92887 1545 aa8.93□□□□□ -0.98
CRNDE-212ENST00000613942 KIF14Q15058 1648 aa8.92□□□□□ -0.98
CRNDE-212ENST00000613942 ABCB7O75027 752 aa8.92□□□□□ -0.98
CRNDE-212ENST00000613942 TRHP20396 242 aaPredicted RBP8.92□□□□□ -0.98
CRNDE-212ENST00000613942 PRKCSHP14314 528 aaPredicted RBP8.91□□□□□ -0.98
CRNDE-212ENST00000613942 DIEXFQ68CQ4 756 aaKnown RBP8.91□□□□□ -0.98
CRNDE-212ENST00000613942 ZNF644Q9H582 1327 aaPredicted RBP8.91□□□□□ -0.98
CRNDE-212ENST00000613942 PTPRKQ15262 1439 aa8.9□□□□□ -0.99
CRNDE-212ENST00000613942 PTPN23Q9H3S7 1636 aa8.89□□□□□ -0.99
CRNDE-212ENST00000613942 KCNH8Q96L42 1107 aa8.89□□□□□ -0.99
CRNDE-212ENST00000613942 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.89□□□□□ -0.99
CRNDE-212ENST00000613942 UHRF1BP1LA0JNW5 1464 aa8.88□□□□□ -0.99
CRNDE-212ENST00000613942 GPATCH8Q9UKJ3 1502 aaKnown RBP8.88□□□□□ -0.99
CRNDE-212ENST00000613942 ADCY10Q96PN6 1610 aa8.88□□□□□ -0.99
CRNDE-212ENST00000613942 ZNF777Q9ULD5 760 aaPredicted RBP8.88□□□□□ -0.99
CRNDE-212ENST00000613942 MIA2Q96PC5 1412 aa8.87□□□□□ -0.99
CRNDE-212ENST00000613942 CFDP1Q9UEE9 299 aaPredicted RBP8.87□□□□□ -0.99
CRNDE-212ENST00000613942 ZCCHC11Q5TAX3 1644 aaKnown RBP8.87□□□□□ -0.99
CRNDE-212ENST00000613942 CHIC2Q9UKJ5 165 aa8.87□□□□□ -0.99
CRNDE-212ENST00000613942 KDM5BQ9UGL1 1544 aa8.87□□□□□ -0.99
CRNDE-212ENST00000613942 TCOF1Q13428 1488 aaKnown RBP8.87□□□□□ -0.99
CRNDE-212ENST00000613942 ABCC10Q5T3U5 1492 aa8.87□□□□□ -0.99
CRNDE-212ENST00000613942 RAB3GAP2Q9H2M9 1393 aa8.85□□□□□ -0.99
CRNDE-212ENST00000613942 SETD5Q9C0A6 1442 aa8.84□□□□□ -0.99
CRNDE-212ENST00000613942 CYB5RLQ6IPT4 315 aa8.84□□□□□ -1
CRNDE-212ENST00000613942 RRP7BPQ9NSQ0 103 aa8.84□□□□□ -1
CRNDE-212ENST00000613942 ZNF316A6NFI3 1004 aaPredicted RBP8.83□□□□□ -1
CRNDE-212ENST00000613942 CAMSAP2Q08AD1 1489 aa8.83□□□□□ -1
CRNDE-212ENST00000613942 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.83□□□□□ -1
CRNDE-212ENST00000613942 CDC42BPAQ5VT25 1732 aa8.83□□□□□ -1
CRNDE-212ENST00000613942 TTC37Q6PGP7 1564 aa8.83□□□□□ -1
CRNDE-212ENST00000613942 NEUROD1Q13562 356 aa8.83□□□□□ -1
CRNDE-212ENST00000613942 ABCC5O15440 1437 aa8.82□□□□□ -1
CRNDE-212ENST00000613942 DHX57Q6P158 1386 aaKnown RBP8.82□□□□□ -1
CRNDE-212ENST00000613942 ITSN2Q9NZM3 1697 aa8.81□□□□□ -1
CRNDE-212ENST00000613942 DAPK1P53355 1430 aa8.81□□□□□ -1
CRNDE-212ENST00000613942 HNRNPMP52272 730 aaKnown RBP eCLIP8.81□□□□□ -1
CRNDE-212ENST00000613942 YTHDC1Q96MU7 727 aaKnown RBP8.81□□□□□ -1
CRNDE-212ENST00000613942 ASXL2Q76L83 1435 aa8.8□□□□□ -1
CRNDE-212ENST00000613942 NPM1P06748 294 aaKnown RBP eCLIP8.8□□□□□ -1
CRNDE-212ENST00000613942 HFM1A2PYH4 1435 aa8.8□□□□□ -1
CRNDE-212ENST00000613942 NAIPQ13075 1403 aa8.8□□□□□ -1
CRNDE-212ENST00000613942 WDR7Q9Y4E6 1490 aa8.8□□□□□ -1
CRNDE-212ENST00000613942 RIMBP3CA6NJZ7 1639 aa8.8□□□□□ -1
CRNDE-212ENST00000613942 RIMBP3BA6NNM3 1639 aa8.8□□□□□ -1
CRNDE-212ENST00000613942 RIMBP3Q9UFD9 1639 aa8.8□□□□□ -1
CRNDE-212ENST00000613942 CDC42BPBQ9Y5S2 1711 aa8.79□□□□□ -1
CRNDE-212ENST00000613942 DNMT1P26358 1616 aaKnown RBP8.79□□□□□ -1
CRNDE-212ENST00000613942 ARHGAP5Q13017 1502 aa8.78□□□□□ -1
CRNDE-212ENST00000613942 PREX2Q70Z35 1606 aa8.78□□□□□ -1
CRNDE-212ENST00000613942 POTEHQ6S545 545 aa8.78□□□□□ -1
CRNDE-212ENST00000613942 MIER1Q8N108 512 aa8.78□□□□□ -1
CRNDE-212ENST00000613942 SAMD9LQ8IVG5 1584 aa8.78□□□□□ -1
CRNDE-212ENST00000613942 DAXXQ9UER7 740 aaPredicted RBP8.77□□□□□ -1.01
CRNDE-212ENST00000613942 PLCH2O75038 1416 aa8.77□□□□□ -1.01
CRNDE-212ENST00000613942 KDM6BO15054 1643 aa8.77□□□□□ -1.01
CRNDE-212ENST00000613942 AKNAQ7Z591 1439 aa8.76□□□□□ -1.01
CRNDE-212ENST00000613942 MBD5Q9P267 1494 aa8.76□□□□□ -1.01
CRNDE-212ENST00000613942 MYO5CQ9NQX4 1742 aa8.75□□□□□ -1.01
CRNDE-212ENST00000613942 ACIN1Q9UKV3 1341 aaKnown RBP8.75□□□□□ -1.01
CRNDE-212ENST00000613942 SYCP2Q9BX26 1530 aa8.75□□□□□ -1.01
CRNDE-212ENST00000613942 ROCK1Q13464 1354 aa8.75□□□□□ -1.01
CRNDE-212ENST00000613942 EFCAB2Q5VUJ9 269 aa8.74□□□□□ -1.01
CRNDE-212ENST00000613942 NCOA1Q15788 1441 aa8.74□□□□□ -1.01
CRNDE-212ENST00000613942 ARHGEF12Q9NZN5 1544 aa8.74□□□□□ -1.01
CRNDE-212ENST00000613942 TSPY4P0CV99 314 aa8.74□□□□□ -1.01
CRNDE-212ENST00000613942 TSPY10P0CW01 314 aa8.74□□□□□ -1.01
CRNDE-212ENST00000613942 ZNF219Q9P2Y4 722 aaPredicted RBP8.74□□□□□ -1.01
CRNDE-212ENST00000613942 C9orf84Q5VXU9 1444 aa8.74□□□□□ -1.01
CRNDE-212ENST00000613942 MAPKBP1O60336 1514 aa8.73□□□□□ -1.01
CRNDE-212ENST00000613942 GCC2Q8IWJ2 1684 aa8.73□□□□□ -1.01
CRNDE-212ENST00000613942 TRIM52Q96A61 297 aa8.73□□□□□ -1.01
CRNDE-212ENST00000613942 CROCC2H7BZ55 1655 aa8.73□□□□□ -1.01
CRNDE-212ENST00000613942 CCDC141Q6ZP82 1450 aa8.72□□□□□ -1.01
CRNDE-212ENST00000613942 ABCA9Q8IUA7 1624 aa8.72□□□□□ -1.01
CRNDE-212ENST00000613942 ANKRD30AQ9BXX3 1397 aa8.72□□□□□ -1.01
CRNDE-212ENST00000613942 SIN3AQ96ST3 1273 aa8.71□□□□□ -1.01
CRNDE-212ENST00000613942 GTF3C3Q9Y5Q9 886 aa8.71□□□□□ -1.01
CRNDE-212ENST00000613942 ARHGEF5Q12774 1597 aa8.71□□□□□ -1.01
CRNDE-212ENST00000613942 CLSPNQ9HAW4 1339 aa8.71□□□□□ -1.01
CRNDE-212ENST00000613942 ADGRL2O95490 1459 aa8.71□□□□□ -1.01
CRNDE-212ENST00000613942 KIAA1107Q9UPP5 1409 aa8.71□□□□□ -1.02
CRNDE-212ENST00000613942 TRAPPC8Q9Y2L5 1435 aa8.71□□□□□ -1.02
CRNDE-212ENST00000613942 AFAP1Q8N556 730 aa8.71□□□□□ -1.02
CRNDE-212ENST00000613942 FANCAO15360 1455 aa8.71□□□□□ -1.02
CRNDE-212ENST00000613942 SHANK2Q9UPX8 1470 aa8.7□□□□□ -1.02
CRNDE-212ENST00000613942 ABCC1P33527 1531 aa8.7□□□□□ -1.02
CRNDE-212ENST00000613942 CD109Q6YHK3 1445 aa8.7□□□□□ -1.02
CRNDE-212ENST00000613942 ADGBQ8N7X0 1667 aa8.7□□□□□ -1.02
CRNDE-212ENST00000613942 PLEKHH2Q8IVE3 1493 aa8.7□□□□□ -1.02
CRNDE-212ENST00000613942 RSPH4AQ5TD94 716 aa8.69□□□□□ -1.02
CRNDE-212ENST00000613942 KIF15Q9NS87 1388 aa8.69□□□□□ -1.02
CRNDE-212ENST00000613942 ANKRD50Q9ULJ7 1429 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms