RNA–Protein interactions for RNA: ENST00000613854.1

HIST1H3A-201, Transcript of histone cluster 1 H3 family member a, humanhuman

APPRIS P1 BASIC

Gene HIST1H3A, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3A-201ENST00000613854 SUPT6HQ7KZ85 1726 aaKnown RBP17.05■□□□□ 0.32
HIST1H3A-201ENST00000613854 RAPGEF3O95398 923 aa17.05■□□□□ 0.32
HIST1H3A-201ENST00000613854 ZNF777Q9ULD5 760 aaPredicted RBP17.05■□□□□ 0.32
HIST1H3A-201ENST00000613854 PREX2Q70Z35 1606 aa17.05■□□□□ 0.32
HIST1H3A-201ENST00000613854 MAP3K1Q13233 1512 aa17.04■□□□□ 0.32
HIST1H3A-201ENST00000613854 GPATCH8Q9UKJ3 1502 aaKnown RBP17.03■□□□□ 0.32
HIST1H3A-201ENST00000613854 NCOA2Q15596 1464 aa17.03■□□□□ 0.32
HIST1H3A-201ENST00000613854 PHLDB1Q86UU1 1377 aa17.02■□□□□ 0.32
HIST1H3A-201ENST00000613854 ARAP3Q8WWN8 1544 aa17.02■□□□□ 0.32
HIST1H3A-201ENST00000613854 ADGRL1O94910 1474 aa17.02■□□□□ 0.32
HIST1H3A-201ENST00000613854 CFDP1Q9UEE9 299 aaPredicted RBP17.01■□□□□ 0.31
HIST1H3A-201ENST00000613854 SCAPERQ9BY12 1400 aa17.01■□□□□ 0.31
HIST1H3A-201ENST00000613854 PPARGC1BQ86YN6 1023 aaKnown RBP17■□□□□ 0.31
HIST1H3A-201ENST00000613854 DENND4BO75064 1496 aaPredicted RBP16.99■□□□□ 0.31
HIST1H3A-201ENST00000613854 FRMPD1Q5SYB0 1578 aa16.97■□□□□ 0.31
HIST1H3A-201ENST00000613854 ITSN2Q9NZM3 1697 aa16.97■□□□□ 0.31
HIST1H3A-201ENST00000613854 RICTORQ6R327 1708 aa16.96■□□□□ 0.3
HIST1H3A-201ENST00000613854 ZNF644Q9H582 1327 aaPredicted RBP16.96■□□□□ 0.3
HIST1H3A-201ENST00000613854 SAMD9LQ8IVG5 1584 aa16.95■□□□□ 0.3
HIST1H3A-201ENST00000613854 HNRNPMP52272 730 aaKnown RBP eCLIP16.94■□□□□ 0.3
HIST1H3A-201ENST00000613854 MYT1LQ9UL68 1186 aa16.94■□□□□ 0.3
HIST1H3A-201ENST00000613854 ABCC1P33527 1531 aa16.93■□□□□ 0.3
HIST1H3A-201ENST00000613854 ARHGEF12Q9NZN5 1544 aa16.93■□□□□ 0.3
HIST1H3A-201ENST00000613854 AFAP1Q8N556 730 aa16.93■□□□□ 0.3
HIST1H3A-201ENST00000613854 POGZQ7Z3K3 1410 aa16.93■□□□□ 0.3
HIST1H3A-201ENST00000613854 SYCP2Q9BX26 1530 aa16.91■□□□□ 0.3
HIST1H3A-201ENST00000613854 TRAPPC8Q9Y2L5 1435 aa16.91■□□□□ 0.3
HIST1H3A-201ENST00000613854 MYOM3Q5VTT5 1437 aa16.88■□□□□ 0.29
HIST1H3A-201ENST00000613854 ZNF518AQ6AHZ1 1483 aa16.88■□□□□ 0.29
HIST1H3A-201ENST00000613854 CAMSAP2Q08AD1 1489 aa16.87■□□□□ 0.29
HIST1H3A-201ENST00000613854 YEATS2Q9ULM3 1422 aa16.87■□□□□ 0.29
HIST1H3A-201ENST00000613854 PLEKHH2Q8IVE3 1493 aa16.86■□□□□ 0.29
HIST1H3A-201ENST00000613854 ZMYM4Q5VZL5 1548 aa16.86■□□□□ 0.29
HIST1H3A-201ENST00000613854 ZFYVE16Q7Z3T8 1539 aa16.85■□□□□ 0.29
HIST1H3A-201ENST00000613854 KIAA1107Q9UPP5 1409 aa16.84■□□□□ 0.29
HIST1H3A-201ENST00000613854 KDM5CP41229 1560 aa16.83■□□□□ 0.28
HIST1H3A-201ENST00000613854 ARHGEF40Q8TER5 1519 aa16.83■□□□□ 0.28
HIST1H3A-201ENST00000613854 HECW2Q9P2P5 1572 aa16.82■□□□□ 0.28
HIST1H3A-201ENST00000613854 SPAG9O60271 1321 aaKnown RBP16.82■□□□□ 0.28
HIST1H3A-201ENST00000613854 ARID4BQ4LE39 1312 aaPredicted RBP16.82■□□□□ 0.28
HIST1H3A-201ENST00000613854 MIA2Q96PC5 1412 aa16.81■□□□□ 0.28
HIST1H3A-201ENST00000613854 PTPN23Q9H3S7 1636 aa16.81■□□□□ 0.28
HIST1H3A-201ENST00000613854 MAGI2Q86UL8 1455 aa16.8■□□□□ 0.28
HIST1H3A-201ENST00000613854 MBD5Q9P267 1494 aa16.8■□□□□ 0.28
HIST1H3A-201ENST00000613854 FGD6Q6ZV73 1430 aa16.8■□□□□ 0.28
HIST1H3A-201ENST00000613854 FAM50AQ14320 339 aaKnown RBP16.79■□□□□ 0.28
HIST1H3A-201ENST00000613854 KIDINS220Q9ULH0 1771 aa16.79■□□□□ 0.28
HIST1H3A-201ENST00000613854 ABCA6Q8N139 1617 aa16.78■□□□□ 0.28
HIST1H3A-201ENST00000613854 CCDC141Q6ZP82 1450 aa16.78■□□□□ 0.28
HIST1H3A-201ENST00000613854 MLH3Q9UHC1 1453 aa16.78■□□□□ 0.28
HIST1H3A-201ENST00000613854 ATP10AO60312 1499 aa16.77■□□□□ 0.28
HIST1H3A-201ENST00000613854 DIP2CQ9Y2E4 1556 aa16.77■□□□□ 0.27
HIST1H3A-201ENST00000613854 MLECQ14165 292 aa16.76■□□□□ 0.27
HIST1H3A-201ENST00000613854 SIGLEC1Q9BZZ2 1709 aa16.76■□□□□ 0.27
HIST1H3A-201ENST00000613854 ATP7AQ04656 1500 aa16.75■□□□□ 0.27
HIST1H3A-201ENST00000613854 KDM4FA0A1W2PPD8 638 aa16.75■□□□□ 0.27
HIST1H3A-201ENST00000613854 TSPY4P0CV99 314 aa16.75■□□□□ 0.27
HIST1H3A-201ENST00000613854 TSPY10P0CW01 314 aa16.75■□□□□ 0.27
HIST1H3A-201ENST00000613854 ARHGEF5Q12774 1597 aa16.75■□□□□ 0.27
HIST1H3A-201ENST00000613854 INO80Q9ULG1 1556 aaPredicted RBP16.74■□□□□ 0.27
HIST1H3A-201ENST00000613854 C9orf84Q5VXU9 1444 aa16.74■□□□□ 0.27
HIST1H3A-201ENST00000613854 RSPH4AQ5TD94 716 aa16.74■□□□□ 0.27
HIST1H3A-201ENST00000613854 TCOF1Q13428 1488 aaKnown RBP16.73■□□□□ 0.27
HIST1H3A-201ENST00000613854 CHIC2Q9UKJ5 165 aa16.7■□□□□ 0.26
HIST1H3A-201ENST00000613854 ABCC5O15440 1437 aa16.7■□□□□ 0.26
HIST1H3A-201ENST00000613854 ITGAEP38570 1179 aa16.69■□□□□ 0.26
HIST1H3A-201ENST00000613854 AEBP2Q6ZN18 517 aaPredicted RBP16.69■□□□□ 0.26
HIST1H3A-201ENST00000613854 BCORL1Q5H9F3 1711 aa16.69■□□□□ 0.26
HIST1H3A-201ENST00000613854 RTEL1-TNFRSF6BF6WH68 1400 aa16.69■□□□□ 0.26
HIST1H3A-201ENST00000613854 DAPK1P53355 1430 aa16.69■□□□□ 0.26
HIST1H3A-201ENST00000613854 DNMT1P26358 1616 aaKnown RBP16.68■□□□□ 0.26
HIST1H3A-201ENST00000613854 CROCC2H7BZ55 1655 aa16.68■□□□□ 0.26
HIST1H3A-201ENST00000613854 ADGBQ8N7X0 1667 aa16.67■□□□□ 0.26
HIST1H3A-201ENST00000613854 A2MP01023 1474 aa16.67■□□□□ 0.26
HIST1H3A-201ENST00000613854 PLPPR3Q6T4P5 718 aa16.66■□□□□ 0.26
HIST1H3A-201ENST00000613854 MAST1Q9Y2H9 1570 aa16.65■□□□□ 0.26
HIST1H3A-201ENST00000613854 REREQ9P2R6 1566 aa16.64■□□□□ 0.25
HIST1H3A-201ENST00000613854 MADDQ8WXG6 1647 aa16.64■□□□□ 0.25
HIST1H3A-201ENST00000613854 RRP7BPQ9NSQ0 103 aa16.64■□□□□ 0.25
HIST1H3A-201ENST00000613854 ADAMTSL3P82987 1691 aa16.64■□□□□ 0.25
HIST1H3A-201ENST00000613854 RIMS1Q86UR5 1692 aaKnown RBP16.62■□□□□ 0.25
HIST1H3A-201ENST00000613854 DHX29Q7Z478 1369 aaKnown RBP16.62■□□□□ 0.25
HIST1H3A-201ENST00000613854 SHANK2Q9UPX8 1470 aa16.61■□□□□ 0.25
HIST1H3A-201ENST00000613854 PLXNC1O60486 1568 aa16.61■□□□□ 0.25
HIST1H3A-201ENST00000613854 GGT6Q6P531 493 aa16.61■□□□□ 0.25
HIST1H3A-201ENST00000613854 FER1L4A9Z1Z3 1794 aa16.61■□□□□ 0.25
HIST1H3A-201ENST00000613854 AGLP35573 1532 aa16.6■□□□□ 0.25
HIST1H3A-201ENST00000613854 KIF3BO15066 747 aa16.6■□□□□ 0.25
HIST1H3A-201ENST00000613854 PTPRKQ15262 1439 aa16.6■□□□□ 0.25
HIST1H3A-201ENST00000613854 RRBP1Q9P2E9 1410 aaKnown RBP16.6■□□□□ 0.25
HIST1H3A-201ENST00000613854 KIF15Q9NS87 1388 aa16.59■□□□□ 0.25
HIST1H3A-201ENST00000613854 ESF1Q9H501 851 aaKnown RBP16.58■□□□□ 0.24
HIST1H3A-201ENST00000613854 ANKRD30AQ9BXX3 1397 aa16.58■□□□□ 0.24
HIST1H3A-201ENST00000613854 DUOX2Q9NRD8 1548 aa16.55■□□□□ 0.24
HIST1H3A-201ENST00000613854 PTPRMP28827 1452 aa16.55■□□□□ 0.24
HIST1H3A-201ENST00000613854 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.55■□□□□ 0.24
HIST1H3A-201ENST00000613854 NCOA1Q15788 1441 aa16.54■□□□□ 0.24
HIST1H3A-201ENST00000613854 CEBPAP49715 358 aaPredicted RBP16.54■□□□□ 0.24
HIST1H3A-201ENST00000613854 ADGRL2O95490 1459 aa16.53■□□□□ 0.24
HIST1H3A-201ENST00000613854 CLTCQ00610 1675 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms