RNA–Protein interactions for RNA: ENST00000613299.1

CRX-207, Transcript of cone-rod homeobox, humanhuman

TSL 3 BASIC

Gene CRX, Length 4,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-207ENST00000613299 ABCA8O94911 1581 aa13.34□□□□□ -0.27
CRX-207ENST00000613299 DAPK1P53355 1430 aa13.33□□□□□ -0.27
CRX-207ENST00000613299 ITSN2Q9NZM3 1697 aa13.33□□□□□ -0.27
CRX-207ENST00000613299 ARHGEF11O15085 1522 aa13.32□□□□□ -0.28
CRX-207ENST00000613299 CENPBP07199 599 aaPredicted RBP13.32□□□□□ -0.28
CRX-207ENST00000613299 NAIPQ13075 1403 aa13.32□□□□□ -0.28
CRX-207ENST00000613299 ROCK1Q13464 1354 aa13.32□□□□□ -0.28
CRX-207ENST00000613299 AKNAQ7Z591 1439 aa13.31□□□□□ -0.28
CRX-207ENST00000613299 HNRNPMP52272 730 aaKnown RBP eCLIP13.31□□□□□ -0.28
CRX-207ENST00000613299 MPHOSPH9Q99550 1183 aa13.31□□□□□ -0.28
CRX-207ENST00000613299 CAMSAP2Q08AD1 1489 aa13.3□□□□□ -0.28
CRX-207ENST00000613299 GPATCH8Q9UKJ3 1502 aaKnown RBP13.3□□□□□ -0.28
CRX-207ENST00000613299 LRRIQ1Q96JM4 1722 aa13.3□□□□□ -0.28
CRX-207ENST00000613299 ABCC2Q92887 1545 aa13.28□□□□□ -0.28
CRX-207ENST00000613299 ABCC5O15440 1437 aa13.28□□□□□ -0.28
CRX-207ENST00000613299 PTPRKQ15262 1439 aa13.28□□□□□ -0.28
CRX-207ENST00000613299 ARHGAP5Q13017 1502 aa13.27□□□□□ -0.28
CRX-207ENST00000613299 PLEKHH2Q8IVE3 1493 aa13.27□□□□□ -0.29
CRX-207ENST00000613299 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.24□□□□□ -0.29
CRX-207ENST00000613299 C9orf84Q5VXU9 1444 aa13.23□□□□□ -0.29
CRX-207ENST00000613299 SHROOM2Q13796 1616 aa13.23□□□□□ -0.29
CRX-207ENST00000613299 PPP1R15AO75807 674 aaPredicted RBP13.23□□□□□ -0.29
CRX-207ENST00000613299 DNMT1P26358 1616 aaKnown RBP13.22□□□□□ -0.29
CRX-207ENST00000613299 NUP155O75694 1391 aa13.22□□□□□ -0.29
CRX-207ENST00000613299 ANKRD50Q9ULJ7 1429 aa13.22□□□□□ -0.29
CRX-207ENST00000613299 CLASP1Q7Z460 1538 aa13.22□□□□□ -0.29
CRX-207ENST00000613299 ADCY10Q96PN6 1610 aa13.21□□□□□ -0.29
CRX-207ENST00000613299 UHRF1BP1LA0JNW5 1464 aa13.21□□□□□ -0.29
CRX-207ENST00000613299 KIF15Q9NS87 1388 aa13.21□□□□□ -0.3
CRX-207ENST00000613299 PKD2Q13563 968 aa13.2□□□□□ -0.3
CRX-207ENST00000613299 CCDC141Q6ZP82 1450 aa13.2□□□□□ -0.3
CRX-207ENST00000613299 ZNF326Q5BKZ1 582 aaKnown RBP13.19□□□□□ -0.3
CRX-207ENST00000613299 SPAG9O60271 1321 aaKnown RBP13.19□□□□□ -0.3
CRX-207ENST00000613299 NCOA1Q15788 1441 aa13.19□□□□□ -0.3
CRX-207ENST00000613299 MAPKBP1O60336 1514 aa13.19□□□□□ -0.3
CRX-207ENST00000613299 ABCC10Q5T3U5 1492 aa13.18□□□□□ -0.3
CRX-207ENST00000613299 FOXD1Q16676 465 aa13.17□□□□□ -0.3
CRX-207ENST00000613299 YTHDC1Q96MU7 727 aaKnown RBP13.17□□□□□ -0.3
CRX-207ENST00000613299 ERCC6L2Q5T890 1561 aa13.16□□□□□ -0.3
CRX-207ENST00000613299 GCC2Q8IWJ2 1684 aa13.16□□□□□ -0.3
CRX-207ENST00000613299 SHANK2Q9UPX8 1470 aa13.16□□□□□ -0.3
CRX-207ENST00000613299 EIF4G2P78344 907 aaKnown RBP eCLIP13.15□□□□□ -0.3
CRX-207ENST00000613299 PLCH2O75038 1416 aa13.15□□□□□ -0.31
CRX-207ENST00000613299 KDM5BQ9UGL1 1544 aa13.14□□□□□ -0.31
CRX-207ENST00000613299 KANK1Q14678 1352 aa13.14□□□□□ -0.31
CRX-207ENST00000613299 ADGRL2O95490 1459 aa13.13□□□□□ -0.31
CRX-207ENST00000613299 WDR7Q9Y4E6 1490 aa13.13□□□□□ -0.31
CRX-207ENST00000613299 KIAA1107Q9UPP5 1409 aa13.13□□□□□ -0.31
CRX-207ENST00000613299 ANP32CO43423 234 aa13.12□□□□□ -0.31
CRX-207ENST00000613299 CYB5RLQ6IPT4 315 aa13.12□□□□□ -0.31
CRX-207ENST00000613299 L3MBTL2Q969R5 705 aa13.11□□□□□ -0.31
CRX-207ENST00000613299 ADGBQ8N7X0 1667 aa13.11□□□□□ -0.31
CRX-207ENST00000613299 DDX10Q13206 875 aaKnown RBP13.11□□□□□ -0.31
CRX-207ENST00000613299 ZCCHC11Q5TAX3 1644 aaKnown RBP13.1□□□□□ -0.31
CRX-207ENST00000613299 MIER1Q8N108 512 aa13.1□□□□□ -0.31
CRX-207ENST00000613299 ARHGEF5Q12774 1597 aa13.1□□□□□ -0.31
CRX-207ENST00000613299 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.09□□□□□ -0.31
CRX-207ENST00000613299 CDC42BPAQ5VT25 1732 aa13.09□□□□□ -0.31
CRX-207ENST00000613299 ASXL2Q76L83 1435 aa13.09□□□□□ -0.31
CRX-207ENST00000613299 PREX2Q70Z35 1606 aa13.09□□□□□ -0.31
CRX-207ENST00000613299 POLR3GLQ9BT43 218 aa13.08□□□□□ -0.32
CRX-207ENST00000613299 SYCP2Q9BX26 1530 aa13.08□□□□□ -0.32
CRX-207ENST00000613299 MYO5CQ9NQX4 1742 aa13.08□□□□□ -0.32
CRX-207ENST00000613299 KDM2AQ9Y2K7 1162 aa13.08□□□□□ -0.32
CRX-207ENST00000613299 HIRIP3Q9BW71 556 aaPredicted RBP13.07□□□□□ -0.32
CRX-207ENST00000613299 ANKRD30BQ9BXX2 1392 aa13.06□□□□□ -0.32
CRX-207ENST00000613299 AFAP1Q8N556 730 aa13.06□□□□□ -0.32
CRX-207ENST00000613299 FANCAO15360 1455 aa13.05□□□□□ -0.32
CRX-207ENST00000613299 SCAPERQ9BY12 1400 aa13.05□□□□□ -0.32
CRX-207ENST00000613299 TTC37Q6PGP7 1564 aa13.05□□□□□ -0.32
CRX-207ENST00000613299 KIF3BO15066 747 aa13.04□□□□□ -0.32
CRX-207ENST00000613299 SAMD9LQ8IVG5 1584 aa13.04□□□□□ -0.32
CRX-207ENST00000613299 MBD5Q9P267 1494 aa13.04□□□□□ -0.32
CRX-207ENST00000613299 MYT1Q01538 1121 aa13.03□□□□□ -0.32
CRX-207ENST00000613299 CCDC144AA2RUR9 1427 aa13.03□□□□□ -0.32
CRX-207ENST00000613299 CD109Q6YHK3 1445 aa13.03□□□□□ -0.32
CRX-207ENST00000613299 ADGRL1O94910 1474 aa13.03□□□□□ -0.32
CRX-207ENST00000613299 RGL3Q3MIN7 710 aa13.03□□□□□ -0.32
CRX-207ENST00000613299 DCAF11Q8TEB1 546 aa13.02□□□□□ -0.32
CRX-207ENST00000613299 HSPA5P11021 654 aaKnown RBP13.02□□□□□ -0.32
CRX-207ENST00000613299 DUOX2Q9NRD8 1548 aa13.02□□□□□ -0.33
CRX-207ENST00000613299 CROCC2H7BZ55 1655 aa13.01□□□□□ -0.33
CRX-207ENST00000613299 RPRD2Q5VT52 1461 aaKnown RBP13.01□□□□□ -0.33
CRX-207ENST00000613299 CARD11Q9BXL7 1154 aa13□□□□□ -0.33
CRX-207ENST00000613299 KDM6BO15054 1643 aa13□□□□□ -0.33
CRX-207ENST00000613299 ERBINQ96RT1 1412 aa12.99□□□□□ -0.33
CRX-207ENST00000613299 RTEL1-TNFRSF6BF6WH68 1400 aa12.99□□□□□ -0.33
CRX-207ENST00000613299 ARAP3Q8WWN8 1544 aa12.99□□□□□ -0.33
CRX-207ENST00000613299 CDC42BPBQ9Y5S2 1711 aa12.99□□□□□ -0.33
CRX-207ENST00000613299 PZPP20742 1482 aa12.98□□□□□ -0.33
CRX-207ENST00000613299 TRAPPC8Q9Y2L5 1435 aa12.98□□□□□ -0.33
CRX-207ENST00000613299 FAM69CQ0P6D2 419 aa12.97□□□□□ -0.33
CRX-207ENST00000613299 CHGAP10645 457 aaKnown RBP12.97□□□□□ -0.33
CRX-207ENST00000613299 GGT6Q6P531 493 aa12.96□□□□□ -0.34
CRX-207ENST00000613299 MAST1Q9Y2H9 1570 aa12.95□□□□□ -0.34
CRX-207ENST00000613299 ABCC1P33527 1531 aa12.95□□□□□ -0.34
CRX-207ENST00000613299 ESF1Q9H501 851 aaKnown RBP12.95□□□□□ -0.34
CRX-207ENST00000613299 FAM135AQ9P2D6 1515 aa12.93□□□□□ -0.34
CRX-207ENST00000613299 ZNF518AQ6AHZ1 1483 aa12.93□□□□□ -0.34
CRX-207ENST00000613299 CFAP74Q9C0B2 1584 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms