RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 HNRNPUQ00839 825 aaKnown RBP eCLIP11.63□□□□□ -0.55
PDE6A-204ENST00000613228 MRS2Q9HD23 443 aa11.63□□□□□ -0.55
PDE6A-204ENST00000613228 NUP155O75694 1391 aa11.63□□□□□ -0.55
PDE6A-204ENST00000613228 PLEKHH2Q8IVE3 1493 aa11.62□□□□□ -0.55
PDE6A-204ENST00000613228 PHLDB1Q86UU1 1377 aa11.62□□□□□ -0.55
PDE6A-204ENST00000613228 FKBP8Q14318 412 aa11.62□□□□□ -0.55
PDE6A-204ENST00000613228 WDR43Q15061 677 aaKnown RBP eCLIP11.62□□□□□ -0.55
PDE6A-204ENST00000613228 PKD2Q13563 968 aa11.62□□□□□ -0.55
PDE6A-204ENST00000613228 UACAQ9BZF9 1416 aa11.62□□□□□ -0.55
PDE6A-204ENST00000613228 NBR1Q14596 966 aa11.61□□□□□ -0.55
PDE6A-204ENST00000613228 CANXP27824 592 aaKnown RBP11.6□□□□□ -0.55
PDE6A-204ENST00000613228 PPP1R15AO75807 674 aaPredicted RBP11.6□□□□□ -0.55
PDE6A-204ENST00000613228 DEKP35659 375 aaKnown RBP11.6□□□□□ -0.55
PDE6A-204ENST00000613228 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.6□□□□□ -0.55
PDE6A-204ENST00000613228 PCF11O94913 1555 aaKnown RBP11.59□□□□□ -0.55
PDE6A-204ENST00000613228 HDGFP51858 240 aaKnown RBP11.59□□□□□ -0.55
PDE6A-204ENST00000613228 GRIN2AQ12879 1464 aa11.59□□□□□ -0.55
PDE6A-204ENST00000613228 PRG4Q92954 1404 aaPredicted RBP11.59□□□□□ -0.55
PDE6A-204ENST00000613228 SPAG9O60271 1321 aaKnown RBP11.58□□□□□ -0.56
PDE6A-204ENST00000613228 EIF3AQ14152 1382 aaKnown RBP11.58□□□□□ -0.56
PDE6A-204ENST00000613228 OSCARQ8IYS5 282 aa11.58□□□□□ -0.56
PDE6A-204ENST00000613228 TROQ12816 1431 aaPredicted RBP11.58□□□□□ -0.56
PDE6A-204ENST00000613228 ROCK2O75116 1388 aaKnown RBP11.58□□□□□ -0.56
PDE6A-204ENST00000613228 TMF1P82094 1093 aa11.58□□□□□ -0.56
PDE6A-204ENST00000613228 FAM9BQ8IZU0 186 aa11.58□□□□□ -0.56
PDE6A-204ENST00000613228 RGL3Q3MIN7 710 aa11.56□□□□□ -0.56
PDE6A-204ENST00000613228 KNSTRNQ9Y448 316 aa11.56□□□□□ -0.56
PDE6A-204ENST00000613228 CTTNBP2Q8WZ74 1663 aa11.55□□□□□ -0.56
PDE6A-204ENST00000613228 ZBTB47Q9UFB7 747 aaPredicted RBP11.55□□□□□ -0.56
PDE6A-204ENST00000613228 EPRSP07814 1512 aaKnown RBP11.55□□□□□ -0.56
PDE6A-204ENST00000613228 DCAF11Q8TEB1 546 aa11.55□□□□□ -0.56
PDE6A-204ENST00000613228 STAC3Q96MF2 364 aa11.55□□□□□ -0.56
PDE6A-204ENST00000613228 HNRNPMP52272 730 aaKnown RBP eCLIP11.55□□□□□ -0.56
PDE6A-204ENST00000613228 HSPA5P11021 654 aaKnown RBP11.54□□□□□ -0.56
PDE6A-204ENST00000613228 CFAP53Q96M91 514 aa11.54□□□□□ -0.56
PDE6A-204ENST00000613228 HFM1A2PYH4 1435 aa11.53□□□□□ -0.56
PDE6A-204ENST00000613228 ROCK1Q13464 1354 aa11.53□□□□□ -0.56
PDE6A-204ENST00000613228 SUPT16HQ9Y5B9 1047 aaKnown RBP11.52□□□□□ -0.57
PDE6A-204ENST00000613228 KIF21AQ7Z4S6 1674 aa11.52□□□□□ -0.57
PDE6A-204ENST00000613228 CCDC144AA2RUR9 1427 aa11.51□□□□□ -0.57
PDE6A-204ENST00000613228 WDR62O43379 1518 aa11.51□□□□□ -0.57
PDE6A-204ENST00000613228 ADAMTS12P58397 1594 aa11.51□□□□□ -0.57
PDE6A-204ENST00000613228 ARHGAP5Q13017 1502 aa11.5□□□□□ -0.57
PDE6A-204ENST00000613228 HIRIP3Q9BW71 556 aaPredicted RBP11.49□□□□□ -0.57
PDE6A-204ENST00000613228 RALBP1Q15311 655 aa11.49□□□□□ -0.57
PDE6A-204ENST00000613228 ARID4BQ4LE39 1312 aaPredicted RBP11.49□□□□□ -0.57
PDE6A-204ENST00000613228 KIF14Q15058 1648 aa11.48□□□□□ -0.57
PDE6A-204ENST00000613228 ANKRD50Q9ULJ7 1429 aa11.48□□□□□ -0.57
PDE6A-204ENST00000613228 KIF15Q9NS87 1388 aa11.48□□□□□ -0.57
PDE6A-204ENST00000613228 L3MBTL2Q969R5 705 aa11.47□□□□□ -0.57
PDE6A-204ENST00000613228 DAPK1P53355 1430 aa11.47□□□□□ -0.57
PDE6A-204ENST00000613228 RTN4Q9NQC3 1192 aaKnown RBP11.47□□□□□ -0.57
PDE6A-204ENST00000613228 UGGT2Q9NYU1 1516 aa11.47□□□□□ -0.57
PDE6A-204ENST00000613228 KTN1Q86UP2 1357 aaKnown RBP11.47□□□□□ -0.57
PDE6A-204ENST00000613228 TSHZ2Q9NRE2 1034 aa11.47□□□□□ -0.57
PDE6A-204ENST00000613228 PNNQ9H307 717 aaKnown RBP11.46□□□□□ -0.57
PDE6A-204ENST00000613228 PKNOX2Q96KN3 472 aa11.46□□□□□ -0.57
PDE6A-204ENST00000613228 PTPN23Q9H3S7 1636 aa11.46□□□□□ -0.57
PDE6A-204ENST00000613228 CFAP43Q8NDM7 1665 aa11.45□□□□□ -0.58
PDE6A-204ENST00000613228 ABCA5Q8WWZ7 1642 aa11.44□□□□□ -0.58
PDE6A-204ENST00000613228 KIF3BO15066 747 aa11.44□□□□□ -0.58
PDE6A-204ENST00000613228 POGKQ9P215 609 aa11.44□□□□□ -0.58
PDE6A-204ENST00000613228 C9orf84Q5VXU9 1444 aa11.44□□□□□ -0.58
PDE6A-204ENST00000613228 AKNAQ7Z591 1439 aa11.44□□□□□ -0.58
PDE6A-204ENST00000613228 TNNT2P45379 298 aaPredicted RBP11.43□□□□□ -0.58
PDE6A-204ENST00000613228 PODXL2Q9NZ53 605 aa11.43□□□□□ -0.58
PDE6A-204ENST00000613228 NUDCQ9Y266 331 aa11.43□□□□□ -0.58
PDE6A-204ENST00000613228 RAPGEF6Q8TEU7 1601 aa11.42□□□□□ -0.58
PDE6A-204ENST00000613228 FOXD1Q16676 465 aa11.42□□□□□ -0.58
PDE6A-204ENST00000613228 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.42□□□□□ -0.58
PDE6A-204ENST00000613228 PBRM1Q86U86 1689 aa11.42□□□□□ -0.58
PDE6A-204ENST00000613228 CDK13Q14004 1512 aaKnown RBP11.42□□□□□ -0.58
PDE6A-204ENST00000613228 NOP58Q9Y2X3 529 aaKnown RBP11.41□□□□□ -0.58
PDE6A-204ENST00000613228 NCLP19338 710 aaKnown RBP11.41□□□□□ -0.58
PDE6A-204ENST00000613228 RBM19Q9Y4C8 960 aaKnown RBP11.41□□□□□ -0.58
PDE6A-204ENST00000613228 ZNF608Q9ULD9 1512 aaPredicted RBP11.41□□□□□ -0.58
PDE6A-204ENST00000613228 GGT6Q6P531 493 aa11.41□□□□□ -0.58
PDE6A-204ENST00000613228 KIAA1107Q9UPP5 1409 aa11.4□□□□□ -0.58
PDE6A-204ENST00000613228 WASHC2CQ9Y4E1 1318 aa11.39□□□□□ -0.59
PDE6A-204ENST00000613228 CAMSAP2Q08AD1 1489 aa11.39□□□□□ -0.59
PDE6A-204ENST00000613228 KIAA0556O60303 1618 aa11.39□□□□□ -0.59
PDE6A-204ENST00000613228 ITSN2Q9NZM3 1697 aa11.39□□□□□ -0.59
PDE6A-204ENST00000613228 CCDC136Q96JN2 1154 aa11.39□□□□□ -0.59
PDE6A-204ENST00000613228 CCDC141Q6ZP82 1450 aa11.39□□□□□ -0.59
PDE6A-204ENST00000613228 PPM1GO15355 546 aaPredicted RBP11.37□□□□□ -0.59
PDE6A-204ENST00000613228 EIF4G3O43432 1585 aaKnown RBP11.37□□□□□ -0.59
PDE6A-204ENST00000613228 NPM2Q86SE8 214 aaKnown RBP11.36□□□□□ -0.59
PDE6A-204ENST00000613228 RSPH6AQ9H0K4 717 aa11.36□□□□□ -0.59
PDE6A-204ENST00000613228 NAIPQ13075 1403 aa11.36□□□□□ -0.59
PDE6A-204ENST00000613228 USP47Q96K76 1375 aa11.36□□□□□ -0.59
PDE6A-204ENST00000613228 ZNF644Q9H582 1327 aaPredicted RBP11.36□□□□□ -0.59
PDE6A-204ENST00000613228 MS4A1P11836 297 aa11.36□□□□□ -0.59
PDE6A-204ENST00000613228 DNAJC5BQ9UF47 199 aa11.36□□□□□ -0.59
PDE6A-204ENST00000613228 TCOF1Q13428 1488 aaKnown RBP11.35□□□□□ -0.59
PDE6A-204ENST00000613228 ANP32BQ92688 251 aaKnown RBP11.35□□□□□ -0.59
PDE6A-204ENST00000613228 HDGFL2Q7Z4V5 671 aaPredicted RBP11.35□□□□□ -0.59
PDE6A-204ENST00000613228 CHMP4BQ9H444 224 aaKnown RBP11.35□□□□□ -0.59
PDE6A-204ENST00000613228 NAP1L5Q96NT1 182 aaPredicted RBP11.34□□□□□ -0.59
PDE6A-204ENST00000613228 UPF2Q9HAU5 1272 aaKnown RBP11.34□□□□□ -0.59
PDE6A-204ENST00000613228 MAPK8IP3Q9UPT6 1336 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms