RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 KIF14Q15058 1648 aa18.03■□□□□ 0.48
CCL3L3-201ENST00000612839 NCBP3Q53F19 620 aaKnown RBP18.02■□□□□ 0.48
CCL3L3-201ENST00000612839 KDM6BO15054 1643 aa18.01■□□□□ 0.47
CCL3L3-201ENST00000612839 C1QBPQ07021 282 aaKnown RBP17.98■□□□□ 0.47
CCL3L3-201ENST00000612839 COL17A1Q9UMD9 1497 aaPredicted RBP17.98■□□□□ 0.47
CCL3L3-201ENST00000612839 MYO5CQ9NQX4 1742 aa17.95■□□□□ 0.46
CCL3L3-201ENST00000612839 TIAM1Q13009 1591 aa17.95■□□□□ 0.46
CCL3L3-201ENST00000612839 PLCH2O75038 1416 aa17.94■□□□□ 0.46
CCL3L3-201ENST00000612839 NEO1Q92859 1461 aa17.93■□□□□ 0.46
CCL3L3-201ENST00000612839 EHBP1L1Q8N3D4 1523 aa17.92■□□□□ 0.46
CCL3L3-201ENST00000612839 MTUS2Q5JR59 1369 aa17.92■□□□□ 0.46
CCL3L3-201ENST00000612839 FANCAO15360 1455 aa17.92■□□□□ 0.46
CCL3L3-201ENST00000612839 ARAP3Q8WWN8 1544 aa17.91■□□□□ 0.46
CCL3L3-201ENST00000612839 PHLDB1Q86UU1 1377 aa17.91■□□□□ 0.46
CCL3L3-201ENST00000612839 MAP3K1Q13233 1512 aa17.9■□□□□ 0.46
CCL3L3-201ENST00000612839 CFAP74Q9C0B2 1584 aa17.9■□□□□ 0.46
CCL3L3-201ENST00000612839 CDC42BPBQ9Y5S2 1711 aa17.9■□□□□ 0.46
CCL3L3-201ENST00000612839 CDC42BPAQ5VT25 1732 aa17.89■□□□□ 0.45
CCL3L3-201ENST00000612839 PREX2Q70Z35 1606 aa17.88■□□□□ 0.45
CCL3L3-201ENST00000612839 AKNAQ7Z591 1439 aa17.87■□□□□ 0.45
CCL3L3-201ENST00000612839 LRRC9Q6ZRR7 1453 aa17.87■□□□□ 0.45
CCL3L3-201ENST00000612839 ARHGAP5Q13017 1502 aa17.86■□□□□ 0.45
CCL3L3-201ENST00000612839 GPATCH8Q9UKJ3 1502 aaKnown RBP17.84■□□□□ 0.45
CCL3L3-201ENST00000612839 KANK4Q5T7N3 995 aaPredicted RBP17.84■□□□□ 0.45
CCL3L3-201ENST00000612839 SUPT6HQ7KZ85 1726 aaKnown RBP17.84■□□□□ 0.45
CCL3L3-201ENST00000612839 EFCAB2Q5VUJ9 269 aa17.83■□□□□ 0.45
CCL3L3-201ENST00000612839 FRMPD1Q5SYB0 1578 aa17.83■□□□□ 0.44
CCL3L3-201ENST00000612839 ADGRL1O94910 1474 aa17.82■□□□□ 0.44
CCL3L3-201ENST00000612839 RICTORQ6R327 1708 aa17.82■□□□□ 0.44
CCL3L3-201ENST00000612839 RAPGEF3O95398 923 aa17.82■□□□□ 0.44
CCL3L3-201ENST00000612839 NCOA2Q15596 1464 aa17.81■□□□□ 0.44
CCL3L3-201ENST00000612839 CCNB3Q8WWL7 1395 aa17.8■□□□□ 0.44
CCL3L3-201ENST00000612839 DENND4BO75064 1496 aaPredicted RBP17.8■□□□□ 0.44
CCL3L3-201ENST00000612839 APLP2Q06481 763 aa17.8■□□□□ 0.44
CCL3L3-201ENST00000612839 SCAPERQ9BY12 1400 aa17.79■□□□□ 0.44
CCL3L3-201ENST00000612839 ITSN2Q9NZM3 1697 aa17.79■□□□□ 0.44
CCL3L3-201ENST00000612839 SAMD9LQ8IVG5 1584 aa17.77■□□□□ 0.44
CCL3L3-201ENST00000612839 ABCC1P33527 1531 aa17.76■□□□□ 0.43
CCL3L3-201ENST00000612839 POGZQ7Z3K3 1410 aa17.76■□□□□ 0.43
CCL3L3-201ENST00000612839 CFDP1Q9UEE9 299 aaPredicted RBP17.75■□□□□ 0.43
CCL3L3-201ENST00000612839 NPM3O75607 178 aaKnown RBP17.75■□□□□ 0.43
CCL3L3-201ENST00000612839 ARHGEF12Q9NZN5 1544 aa17.74■□□□□ 0.43
CCL3L3-201ENST00000612839 ZMYM4Q5VZL5 1548 aa17.74■□□□□ 0.43
CCL3L3-201ENST00000612839 ZNF777Q9ULD5 760 aaPredicted RBP17.73■□□□□ 0.43
CCL3L3-201ENST00000612839 ZNF518AQ6AHZ1 1483 aa17.72■□□□□ 0.43
CCL3L3-201ENST00000612839 SYCP2Q9BX26 1530 aa17.71■□□□□ 0.43
CCL3L3-201ENST00000612839 KDM5CP41229 1560 aa17.7■□□□□ 0.42
CCL3L3-201ENST00000612839 TRAPPC8Q9Y2L5 1435 aa17.7■□□□□ 0.42
CCL3L3-201ENST00000612839 AFAP1Q8N556 730 aa17.69■□□□□ 0.42
CCL3L3-201ENST00000612839 ZNF644Q9H582 1327 aaPredicted RBP17.69■□□□□ 0.42
CCL3L3-201ENST00000612839 KIAA1107Q9UPP5 1409 aa17.69■□□□□ 0.42
CCL3L3-201ENST00000612839 PLEKHH2Q8IVE3 1493 aa17.69■□□□□ 0.42
CCL3L3-201ENST00000612839 MAGI2Q86UL8 1455 aa17.68■□□□□ 0.42
CCL3L3-201ENST00000612839 ARHGEF40Q8TER5 1519 aa17.68■□□□□ 0.42
CCL3L3-201ENST00000612839 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.68■□□□□ 0.42
CCL3L3-201ENST00000612839 MYOM3Q5VTT5 1437 aa17.67■□□□□ 0.42
CCL3L3-201ENST00000612839 YEATS2Q9ULM3 1422 aa17.66■□□□□ 0.42
CCL3L3-201ENST00000612839 ZFYVE16Q7Z3T8 1539 aa17.66■□□□□ 0.42
CCL3L3-201ENST00000612839 HNRNPMP52272 730 aaKnown RBP eCLIP17.66■□□□□ 0.42
CCL3L3-201ENST00000612839 CAMSAP2Q08AD1 1489 aa17.66■□□□□ 0.42
CCL3L3-201ENST00000612839 HECW2Q9P2P5 1572 aa17.65■□□□□ 0.42
CCL3L3-201ENST00000612839 MBD5Q9P267 1494 aa17.64■□□□□ 0.41
CCL3L3-201ENST00000612839 MIA2Q96PC5 1412 aa17.63■□□□□ 0.41
CCL3L3-201ENST00000612839 MLH3Q9UHC1 1453 aa17.63■□□□□ 0.41
CCL3L3-201ENST00000612839 KIDINS220Q9ULH0 1771 aa17.62■□□□□ 0.41
CCL3L3-201ENST00000612839 SIGLEC1Q9BZZ2 1709 aa17.6■□□□□ 0.41
CCL3L3-201ENST00000612839 ABCA6Q8N139 1617 aa17.59■□□□□ 0.41
CCL3L3-201ENST00000612839 DIP2CQ9Y2E4 1556 aa17.59■□□□□ 0.41
CCL3L3-201ENST00000612839 FGD6Q6ZV73 1430 aa17.58■□□□□ 0.4
CCL3L3-201ENST00000612839 ARHGEF5Q12774 1597 aa17.58■□□□□ 0.4
CCL3L3-201ENST00000612839 INO80Q9ULG1 1556 aaPredicted RBP17.58■□□□□ 0.4
CCL3L3-201ENST00000612839 ATP10AO60312 1499 aa17.57■□□□□ 0.4
CCL3L3-201ENST00000612839 KDM4FA0A1W2PPD8 638 aa17.57■□□□□ 0.4
CCL3L3-201ENST00000612839 PPARGC1BQ86YN6 1023 aaKnown RBP17.57■□□□□ 0.4
CCL3L3-201ENST00000612839 MYT1LQ9UL68 1186 aa17.57■□□□□ 0.4
CCL3L3-201ENST00000612839 PTPN23Q9H3S7 1636 aa17.57■□□□□ 0.4
CCL3L3-201ENST00000612839 SPAG9O60271 1321 aaKnown RBP17.57■□□□□ 0.4
CCL3L3-201ENST00000612839 CCDC141Q6ZP82 1450 aa17.57■□□□□ 0.4
CCL3L3-201ENST00000612839 ATP7AQ04656 1500 aa17.56■□□□□ 0.4
CCL3L3-201ENST00000612839 C9orf84Q5VXU9 1444 aa17.56■□□□□ 0.4
CCL3L3-201ENST00000612839 RSPH4AQ5TD94 716 aa17.55■□□□□ 0.4
CCL3L3-201ENST00000612839 TCOF1Q13428 1488 aaKnown RBP17.54■□□□□ 0.4
CCL3L3-201ENST00000612839 REREQ9P2R6 1566 aa17.54■□□□□ 0.4
CCL3L3-201ENST00000612839 BCORL1Q5H9F3 1711 aa17.53■□□□□ 0.4
CCL3L3-201ENST00000612839 RTEL1-TNFRSF6BF6WH68 1400 aa17.52■□□□□ 0.39
CCL3L3-201ENST00000612839 ARID4BQ4LE39 1312 aaPredicted RBP17.52■□□□□ 0.39
CCL3L3-201ENST00000612839 ADAMTSL3P82987 1691 aa17.5■□□□□ 0.39
CCL3L3-201ENST00000612839 MAST1Q9Y2H9 1570 aa17.49■□□□□ 0.39
CCL3L3-201ENST00000612839 CROCC2H7BZ55 1655 aa17.48■□□□□ 0.39
CCL3L3-201ENST00000612839 ADGBQ8N7X0 1667 aa17.48■□□□□ 0.39
CCL3L3-201ENST00000612839 DNMT1P26358 1616 aaKnown RBP17.48■□□□□ 0.39
CCL3L3-201ENST00000612839 ABCC5O15440 1437 aa17.47■□□□□ 0.39
CCL3L3-201ENST00000612839 TSPY4P0CV99 314 aa17.47■□□□□ 0.39
CCL3L3-201ENST00000612839 TSPY10P0CW01 314 aa17.47■□□□□ 0.39
CCL3L3-201ENST00000612839 AGLP35573 1532 aa17.47■□□□□ 0.39
CCL3L3-201ENST00000612839 PLXNC1O60486 1568 aa17.47■□□□□ 0.39
CCL3L3-201ENST00000612839 DAPK1P53355 1430 aa17.46■□□□□ 0.38
CCL3L3-201ENST00000612839 A2MP01023 1474 aa17.45■□□□□ 0.38
CCL3L3-201ENST00000612839 MADDQ8WXG6 1647 aa17.45■□□□□ 0.38
CCL3L3-201ENST00000612839 SHANK2Q9UPX8 1470 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms