RNA–Protein interactions for RNA: ENST00000612778.4

MUC1-225, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 1,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-225ENST00000612778 PREX2Q70Z35 1606 aa20.7■□□□□ 0.9
MUC1-225ENST00000612778 PLCH2O75038 1416 aa20.7■□□□□ 0.9
MUC1-225ENST00000612778 MAPKBP1O60336 1514 aa20.68■□□□□ 0.9
MUC1-225ENST00000612778 CDC42BPBQ9Y5S2 1711 aa20.68■□□□□ 0.9
MUC1-225ENST00000612778 ARHGAP5Q13017 1502 aa20.67■□□□□ 0.9
MUC1-225ENST00000612778 ABCA9Q8IUA7 1624 aa20.66■□□□□ 0.9
MUC1-225ENST00000612778 MYO5CQ9NQX4 1742 aa20.66■□□□□ 0.9
MUC1-225ENST00000612778 ABCC5O15440 1437 aa20.65■□□□□ 0.9
MUC1-225ENST00000612778 DAPK1P53355 1430 aa20.65■□□□□ 0.9
MUC1-225ENST00000612778 EFCAB2Q5VUJ9 269 aa20.64■□□□□ 0.89
MUC1-225ENST00000612778 CHIC2Q9UKJ5 165 aa20.64■□□□□ 0.89
MUC1-225ENST00000612778 SAMD9LQ8IVG5 1584 aa20.63■□□□□ 0.89
MUC1-225ENST00000612778 HNRNPMP52272 730 aaKnown RBP eCLIP20.62■□□□□ 0.89
MUC1-225ENST00000612778 DNMT1P26358 1616 aaKnown RBP20.62■□□□□ 0.89
MUC1-225ENST00000612778 ARAP3Q8WWN8 1544 aa20.6■□□□□ 0.89
MUC1-225ENST00000612778 SETD5Q9C0A6 1442 aa20.6■□□□□ 0.89
MUC1-225ENST00000612778 MBD5Q9P267 1494 aa20.59■□□□□ 0.89
MUC1-225ENST00000612778 CD109Q6YHK3 1445 aa20.58■□□□□ 0.88
MUC1-225ENST00000612778 RAB3GAP2Q9H2M9 1393 aa20.57■□□□□ 0.88
MUC1-225ENST00000612778 HFM1A2PYH4 1435 aa20.57■□□□□ 0.88
MUC1-225ENST00000612778 KIAA1107Q9UPP5 1409 aa20.57■□□□□ 0.88
MUC1-225ENST00000612778 PLEKHH2Q8IVE3 1493 aa20.56■□□□□ 0.88
MUC1-225ENST00000612778 RRP7BPQ9NSQ0 103 aa20.56■□□□□ 0.88
MUC1-225ENST00000612778 AKNAQ7Z591 1439 aa20.55■□□□□ 0.88
MUC1-225ENST00000612778 FANCAO15360 1455 aa20.55■□□□□ 0.88
MUC1-225ENST00000612778 RSPH4AQ5TD94 716 aa20.55■□□□□ 0.88
MUC1-225ENST00000612778 SYCP2Q9BX26 1530 aa20.54■□□□□ 0.88
MUC1-225ENST00000612778 ARHGEF5Q12774 1597 aa20.54■□□□□ 0.88
MUC1-225ENST00000612778 NAIPQ13075 1403 aa20.54■□□□□ 0.88
MUC1-225ENST00000612778 ARHGEF12Q9NZN5 1544 aa20.54■□□□□ 0.88
MUC1-225ENST00000612778 ROCK1Q13464 1354 aa20.54■□□□□ 0.88
MUC1-225ENST00000612778 CCER1Q8TC90 406 aaPredicted RBP20.53■□□□□ 0.88
MUC1-225ENST00000612778 TSPY4P0CV99 314 aa20.53■□□□□ 0.88
MUC1-225ENST00000612778 TSPY10P0CW01 314 aa20.53■□□□□ 0.88
MUC1-225ENST00000612778 FAM69CQ0P6D2 419 aa20.53■□□□□ 0.88
MUC1-225ENST00000612778 GLI2P10070 1586 aa20.52■□□□□ 0.88
MUC1-225ENST00000612778 CCDC141Q6ZP82 1450 aa20.51■□□□□ 0.87
MUC1-225ENST00000612778 ABCC1P33527 1531 aa20.51■□□□□ 0.87
MUC1-225ENST00000612778 HRCP23327 699 aa20.5■□□□□ 0.87
MUC1-225ENST00000612778 C9orf84Q5VXU9 1444 aa20.5■□□□□ 0.87
MUC1-225ENST00000612778 SHANK2Q9UPX8 1470 aa20.5■□□□□ 0.87
MUC1-225ENST00000612778 NCOA1Q15788 1441 aa20.49■□□□□ 0.87
MUC1-225ENST00000612778 DIP2BQ9P265 1576 aa20.49■□□□□ 0.87
MUC1-225ENST00000612778 CROCC2H7BZ55 1655 aa20.49■□□□□ 0.87
MUC1-225ENST00000612778 ADGRL2O95490 1459 aa20.48■□□□□ 0.87
MUC1-225ENST00000612778 TRAPPC8Q9Y2L5 1435 aa20.47■□□□□ 0.87
MUC1-225ENST00000612778 ANKRD30AQ9BXX3 1397 aa20.46■□□□□ 0.87
MUC1-225ENST00000612778 ADGRL1O94910 1474 aa20.46■□□□□ 0.87
MUC1-225ENST00000612778 MAP3K4Q9Y6R4 1608 aa20.46■□□□□ 0.87
MUC1-225ENST00000612778 SCAPERQ9BY12 1400 aa20.45■□□□□ 0.86
MUC1-225ENST00000612778 AFAP1Q8N556 730 aa20.44■□□□□ 0.86
MUC1-225ENST00000612778 DHX57Q6P158 1386 aaKnown RBP20.43■□□□□ 0.86
MUC1-225ENST00000612778 GCC2Q8IWJ2 1684 aa20.43■□□□□ 0.86
MUC1-225ENST00000612778 ADGBQ8N7X0 1667 aa20.42■□□□□ 0.86
MUC1-225ENST00000612778 NEO1Q92859 1461 aa20.41■□□□□ 0.86
MUC1-225ENST00000612778 CFAP74Q9C0B2 1584 aa20.41■□□□□ 0.86
MUC1-225ENST00000612778 MAST1Q9Y2H9 1570 aa20.4■□□□□ 0.86
MUC1-225ENST00000612778 KDM6BO15054 1643 aa20.4■□□□□ 0.86
MUC1-225ENST00000612778 SPAG9O60271 1321 aaKnown RBP20.38■□□□□ 0.85
MUC1-225ENST00000612778 KIF15Q9NS87 1388 aa20.38■□□□□ 0.85
MUC1-225ENST00000612778 ANKRD50Q9ULJ7 1429 aa20.35■□□□□ 0.85
MUC1-225ENST00000612778 RTEL1-TNFRSF6BF6WH68 1400 aa20.34■□□□□ 0.85
MUC1-225ENST00000612778 KIF13AQ9H1H9 1805 aa20.34■□□□□ 0.85
MUC1-225ENST00000612778 POGZQ7Z3K3 1410 aa20.33■□□□□ 0.85
MUC1-225ENST00000612778 ZNF518AQ6AHZ1 1483 aa20.33■□□□□ 0.85
MUC1-225ENST00000612778 ZEB1P37275 1124 aaPredicted RBP20.33■□□□□ 0.85
MUC1-225ENST00000612778 TRIM52Q96A61 297 aa20.33■□□□□ 0.85
MUC1-225ENST00000612778 PLXNC1O60486 1568 aa20.31■□□□□ 0.84
MUC1-225ENST00000612778 DENND4BO75064 1496 aaPredicted RBP20.31■□□□□ 0.84
MUC1-225ENST00000612778 RAPGEF3O95398 923 aa20.31■□□□□ 0.84
MUC1-225ENST00000612778 PPRC1Q5VV67 1664 aaKnown RBP20.31■□□□□ 0.84
MUC1-225ENST00000612778 ZFYVE16Q7Z3T8 1539 aa20.31■□□□□ 0.84
MUC1-225ENST00000612778 TEX14Q8IWB6 1497 aa20.31■□□□□ 0.84
MUC1-225ENST00000612778 TSPOAP1O95153 1857 aa20.3■□□□□ 0.84
MUC1-225ENST00000612778 ACIN1Q9UKV3 1341 aaKnown RBP20.3■□□□□ 0.84
MUC1-225ENST00000612778 MYT1LQ9UL68 1186 aa20.3■□□□□ 0.84
MUC1-225ENST00000612778 CLSPNQ9HAW4 1339 aa20.29■□□□□ 0.84
MUC1-225ENST00000612778 ATP7AQ04656 1500 aa20.29■□□□□ 0.84
MUC1-225ENST00000612778 INO80Q9ULG1 1556 aaPredicted RBP20.28■□□□□ 0.84
MUC1-225ENST00000612778 KDM5CP41229 1560 aa20.26■□□□□ 0.83
MUC1-225ENST00000612778 DUOX2Q9NRD8 1548 aa20.26■□□□□ 0.83
MUC1-225ENST00000612778 MLH3Q9UHC1 1453 aa20.24■□□□□ 0.83
MUC1-225ENST00000612778 MPHOSPH9Q99550 1183 aa20.24■□□□□ 0.83
MUC1-225ENST00000612778 TRHP20396 242 aaPredicted RBP20.23■□□□□ 0.83
MUC1-225ENST00000612778 ERBINQ96RT1 1412 aa20.22■□□□□ 0.83
MUC1-225ENST00000612778 KIDINS220Q9ULH0 1771 aa20.22■□□□□ 0.83
MUC1-225ENST00000612778 RICTORQ6R327 1708 aa20.2■□□□□ 0.82
MUC1-225ENST00000612778 NUP155O75694 1391 aa20.2■□□□□ 0.82
MUC1-225ENST00000612778 HECW2Q9P2P5 1572 aa20.2■□□□□ 0.82
MUC1-225ENST00000612778 DHX29Q7Z478 1369 aaKnown RBP20.19■□□□□ 0.82
MUC1-225ENST00000612778 SLC4A1APQ9BWU0 796 aaKnown RBP20.19■□□□□ 0.82
MUC1-225ENST00000612778 PZPP20742 1482 aa20.18■□□□□ 0.82
MUC1-225ENST00000612778 FRMPD1Q5SYB0 1578 aa20.18■□□□□ 0.82
MUC1-225ENST00000612778 COL17A1Q9UMD9 1497 aaPredicted RBP20.17■□□□□ 0.82
MUC1-225ENST00000612778 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.15■□□□□ 0.82
MUC1-225ENST00000612778 FOXD1Q16676 465 aa20.14■□□□□ 0.81
MUC1-225ENST00000612778 A2MP01023 1474 aa20.14■□□□□ 0.81
MUC1-225ENST00000612778 KDM5DQ9BY66 1539 aa20.14■□□□□ 0.81
MUC1-225ENST00000612778 SIN3AQ96ST3 1273 aa20.13■□□□□ 0.81
MUC1-225ENST00000612778 YEATS2Q9ULM3 1422 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms