RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 MYO5CQ9NQX4 1742 aa19.7■□□□□ 0.74
PRKN-210ENST00000612540 CDC42BPAQ5VT25 1732 aa19.69■□□□□ 0.74
PRKN-210ENST00000612540 MYOM3Q5VTT5 1437 aa19.68■□□□□ 0.74
PRKN-210ENST00000612540 HECW2Q9P2P5 1572 aa19.67■□□□□ 0.74
PRKN-210ENST00000612540 PREX2Q70Z35 1606 aa19.65■□□□□ 0.74
PRKN-210ENST00000612540 GPATCH8Q9UKJ3 1502 aaKnown RBP19.63■□□□□ 0.73
PRKN-210ENST00000612540 CDC42BPBQ9Y5S2 1711 aa19.62■□□□□ 0.73
PRKN-210ENST00000612540 ARHGAP5Q13017 1502 aa19.62■□□□□ 0.73
PRKN-210ENST00000612540 NEO1Q92859 1461 aa19.62■□□□□ 0.73
PRKN-210ENST00000612540 FGD6Q6ZV73 1430 aa19.62■□□□□ 0.73
PRKN-210ENST00000612540 CFDP1Q9UEE9 299 aaPredicted RBP19.6■□□□□ 0.73
PRKN-210ENST00000612540 PTPN23Q9H3S7 1636 aa19.6■□□□□ 0.73
PRKN-210ENST00000612540 ZNF777Q9ULD5 760 aaPredicted RBP19.58■□□□□ 0.72
PRKN-210ENST00000612540 RAPGEF3O95398 923 aa19.57■□□□□ 0.72
PRKN-210ENST00000612540 FAM50AQ14320 339 aaKnown RBP19.57■□□□□ 0.72
PRKN-210ENST00000612540 PLCH2O75038 1416 aa19.57■□□□□ 0.72
PRKN-210ENST00000612540 MIA2Q96PC5 1412 aa19.57■□□□□ 0.72
PRKN-210ENST00000612540 RRBP1Q9P2E9 1410 aaKnown RBP19.57■□□□□ 0.72
PRKN-210ENST00000612540 FRMPD1Q5SYB0 1578 aa19.56■□□□□ 0.72
PRKN-210ENST00000612540 CAMSAP2Q08AD1 1489 aa19.54■□□□□ 0.72
PRKN-210ENST00000612540 TRIM26Q12899 539 aaPredicted RBP19.54■□□□□ 0.72
PRKN-210ENST00000612540 ADAMTSL3P82987 1691 aa19.53■□□□□ 0.72
PRKN-210ENST00000612540 CFAP74Q9C0B2 1584 aa19.53■□□□□ 0.72
PRKN-210ENST00000612540 RICTORQ6R327 1708 aa19.52■□□□□ 0.72
PRKN-210ENST00000612540 EFCAB2Q5VUJ9 269 aa19.52■□□□□ 0.72
PRKN-210ENST00000612540 FANCAO15360 1455 aa19.52■□□□□ 0.72
PRKN-210ENST00000612540 TCOF1Q13428 1488 aaKnown RBP19.52■□□□□ 0.72
PRKN-210ENST00000612540 SAMD9LQ8IVG5 1584 aa19.52■□□□□ 0.71
PRKN-210ENST00000612540 BCORL1Q5H9F3 1711 aa19.51■□□□□ 0.71
PRKN-210ENST00000612540 ZNF644Q9H582 1327 aaPredicted RBP19.51■□□□□ 0.71
PRKN-210ENST00000612540 AKNAQ7Z591 1439 aa19.49■□□□□ 0.71
PRKN-210ENST00000612540 DENND4BO75064 1496 aaPredicted RBP19.48■□□□□ 0.71
PRKN-210ENST00000612540 ITGAEP38570 1179 aa19.47■□□□□ 0.71
PRKN-210ENST00000612540 ILDR1Q86SU0 546 aaPredicted RBP19.47■□□□□ 0.71
PRKN-210ENST00000612540 PLEKHH2Q8IVE3 1493 aa19.47■□□□□ 0.71
PRKN-210ENST00000612540 MADDQ8WXG6 1647 aa19.47■□□□□ 0.71
PRKN-210ENST00000612540 SYCP2Q9BX26 1530 aa19.46■□□□□ 0.71
PRKN-210ENST00000612540 ABCC1P33527 1531 aa19.46■□□□□ 0.71
PRKN-210ENST00000612540 ARHGEF40Q8TER5 1519 aa19.45■□□□□ 0.7
PRKN-210ENST00000612540 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.44■□□□□ 0.7
PRKN-210ENST00000612540 RIMS1Q86UR5 1692 aaKnown RBP19.44■□□□□ 0.7
PRKN-210ENST00000612540 PTPRMP28827 1452 aa19.43■□□□□ 0.7
PRKN-210ENST00000612540 DNMT1P26358 1616 aaKnown RBP19.43■□□□□ 0.7
PRKN-210ENST00000612540 PCGF6Q9BYE7 350 aa19.42■□□□□ 0.7
PRKN-210ENST00000612540 HNRNPMP52272 730 aaKnown RBP eCLIP19.41■□□□□ 0.7
PRKN-210ENST00000612540 ZMYM4Q5VZL5 1548 aa19.41■□□□□ 0.7
PRKN-210ENST00000612540 ARHGEF5Q12774 1597 aa19.4■□□□□ 0.7
PRKN-210ENST00000612540 CROCC2H7BZ55 1655 aa19.4■□□□□ 0.7
PRKN-210ENST00000612540 DAPK1P53355 1430 aa19.4■□□□□ 0.7
PRKN-210ENST00000612540 KIAA1107Q9UPP5 1409 aa19.4■□□□□ 0.7
PRKN-210ENST00000612540 SIGLEC1Q9BZZ2 1709 aa19.39■□□□□ 0.7
PRKN-210ENST00000612540 SCAPERQ9BY12 1400 aa19.39■□□□□ 0.69
PRKN-210ENST00000612540 CCDC141Q6ZP82 1450 aa19.39■□□□□ 0.69
PRKN-210ENST00000612540 ARHGEF12Q9NZN5 1544 aa19.39■□□□□ 0.69
PRKN-210ENST00000612540 ARID4BQ4LE39 1312 aaPredicted RBP19.38■□□□□ 0.69
PRKN-210ENST00000612540 MBD5Q9P267 1494 aa19.36■□□□□ 0.69
PRKN-210ENST00000612540 ABCC5O15440 1437 aa19.36■□□□□ 0.69
PRKN-210ENST00000612540 ZFYVE16Q7Z3T8 1539 aa19.35■□□□□ 0.69
PRKN-210ENST00000612540 MAGI2Q86UL8 1455 aa19.35■□□□□ 0.69
PRKN-210ENST00000612540 TRAPPC8Q9Y2L5 1435 aa19.35■□□□□ 0.69
PRKN-210ENST00000612540 YEATS2Q9ULM3 1422 aa19.34■□□□□ 0.69
PRKN-210ENST00000612540 ADGBQ8N7X0 1667 aa19.34■□□□□ 0.69
PRKN-210ENST00000612540 CHIC2Q9UKJ5 165 aa19.34■□□□□ 0.69
PRKN-210ENST00000612540 FER1L4A9Z1Z3 1794 aa19.34■□□□□ 0.69
PRKN-210ENST00000612540 POGZQ7Z3K3 1410 aa19.34■□□□□ 0.69
PRKN-210ENST00000612540 PTPRKQ15262 1439 aa19.33■□□□□ 0.68
PRKN-210ENST00000612540 RSPH4AQ5TD94 716 aa19.32■□□□□ 0.68
PRKN-210ENST00000612540 SHANK2Q9UPX8 1470 aa19.32■□□□□ 0.68
PRKN-210ENST00000612540 C9orf84Q5VXU9 1444 aa19.32■□□□□ 0.68
PRKN-210ENST00000612540 ZNF518AQ6AHZ1 1483 aa19.31■□□□□ 0.68
PRKN-210ENST00000612540 TSPY4P0CV99 314 aa19.31■□□□□ 0.68
PRKN-210ENST00000612540 TSPY10P0CW01 314 aa19.31■□□□□ 0.68
PRKN-210ENST00000612540 MYT1LQ9UL68 1186 aa19.3■□□□□ 0.68
PRKN-210ENST00000612540 AFAP1Q8N556 730 aa19.29■□□□□ 0.68
PRKN-210ENST00000612540 SPAG9O60271 1321 aaKnown RBP19.28■□□□□ 0.68
PRKN-210ENST00000612540 MAST1Q9Y2H9 1570 aa19.28■□□□□ 0.68
PRKN-210ENST00000612540 LMTK3Q96Q04 1460 aa19.27■□□□□ 0.67
PRKN-210ENST00000612540 KDM5CP41229 1560 aa19.27■□□□□ 0.67
PRKN-210ENST00000612540 ATP7AQ04656 1500 aa19.25■□□□□ 0.67
PRKN-210ENST00000612540 INO80Q9ULG1 1556 aaPredicted RBP19.25■□□□□ 0.67
PRKN-210ENST00000612540 ANKRD30AQ9BXX3 1397 aa19.25■□□□□ 0.67
PRKN-210ENST00000612540 RRP7BPQ9NSQ0 103 aa19.25■□□□□ 0.67
PRKN-210ENST00000612540 ATP10AO60312 1499 aa19.24■□□□□ 0.67
PRKN-210ENST00000612540 ADGRL2O95490 1459 aa19.24■□□□□ 0.67
PRKN-210ENST00000612540 GCC2Q8IWJ2 1684 aa19.24■□□□□ 0.67
PRKN-210ENST00000612540 PLPPR3Q6T4P5 718 aa19.23■□□□□ 0.67
PRKN-210ENST00000612540 PLXNC1O60486 1568 aa19.23■□□□□ 0.67
PRKN-210ENST00000612540 ROCK1Q13464 1354 aa19.22■□□□□ 0.67
PRKN-210ENST00000612540 KIDINS220Q9ULH0 1771 aa19.21■□□□□ 0.67
PRKN-210ENST00000612540 RTEL1-TNFRSF6BF6WH68 1400 aa19.2■□□□□ 0.66
PRKN-210ENST00000612540 NCOA1Q15788 1441 aa19.2■□□□□ 0.66
PRKN-210ENST00000612540 MLECQ14165 292 aa19.2■□□□□ 0.66
PRKN-210ENST00000612540 KIF15Q9NS87 1388 aa19.19■□□□□ 0.66
PRKN-210ENST00000612540 HFM1A2PYH4 1435 aa19.19■□□□□ 0.66
PRKN-210ENST00000612540 MLH3Q9UHC1 1453 aa19.18■□□□□ 0.66
PRKN-210ENST00000612540 NAIPQ13075 1403 aa19.17■□□□□ 0.66
PRKN-210ENST00000612540 ABCA6Q8N139 1617 aa19.17■□□□□ 0.66
PRKN-210ENST00000612540 SETD5Q9C0A6 1442 aa19.17■□□□□ 0.66
PRKN-210ENST00000612540 PREX1Q8TCU6 1659 aa19.16■□□□□ 0.66
PRKN-210ENST00000612540 DIP2CQ9Y2E4 1556 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms