RNA–Protein interactions for RNA: ENST00000612399.4

PSMC6-219, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PSMC6, Length 1,590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-219ENST00000612399 RIMBP2O15034 1052 aa10.18□□□□□ -0.78
PSMC6-219ENST00000612399 ZEB1P37275 1124 aaPredicted RBP10.18□□□□□ -0.78
PSMC6-219ENST00000612399 TRIM41Q8WV44 630 aa10.18□□□□□ -0.78
PSMC6-219ENST00000612399 ERBB3P21860 1342 aa10.18□□□□□ -0.78
PSMC6-219ENST00000612399 TRIM26Q12899 539 aaPredicted RBP10.18□□□□□ -0.78
PSMC6-219ENST00000612399 EFCAB3Q8N7B9 438 aa10.14□□□□□ -0.79
PSMC6-219ENST00000612399 ZSWIM6Q9HCJ5 1215 aa10.12□□□□□ -0.79
PSMC6-219ENST00000612399 VARS2Q5ST30 1063 aaKnown RBP10.09□□□□□ -0.79
PSMC6-219ENST00000612399 MICALL2Q8IY33 904 aa10.09□□□□□ -0.79
PSMC6-219ENST00000612399 RNF166Q96A37 237 aaPredicted RBP10.09□□□□□ -0.79
PSMC6-219ENST00000612399 SCRIBQ14160 1630 aa10.08□□□□□ -0.8
PSMC6-219ENST00000612399 SOX12O15370 315 aa10.07□□□□□ -0.8
PSMC6-219ENST00000612399 PPARGC1BQ86YN6 1023 aaKnown RBP10.06□□□□□ -0.8
PSMC6-219ENST00000612399 TMEM92Q6UXU6 159 aa10.05□□□□□ -0.8
PSMC6-219ENST00000612399 ZNF687Q8N1G0 1237 aa10.05□□□□□ -0.8
PSMC6-219ENST00000612399 MYT1LQ9UL68 1186 aa10.05□□□□□ -0.8
PSMC6-219ENST00000612399 PTGER2P43116 358 aa10.02□□□□□ -0.81
PSMC6-219ENST00000612399 GPR153Q6NV75 609 aa10.02□□□□□ -0.81
PSMC6-219ENST00000612399 RIOK3O14730 519 aaKnown RBP10.01□□□□□ -0.81
PSMC6-219ENST00000612399 MS4A4AQ96JQ5 239 aa10□□□□□ -0.81
PSMC6-219ENST00000612399 VGFO15240 615 aaPredicted RBP9.99□□□□□ -0.81
PSMC6-219ENST00000612399 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.97□□□□□ -0.81
PSMC6-219ENST00000612399 LOC105371045A0A1W2PR82 267 aa9.97□□□□□ -0.81
PSMC6-219ENST00000612399 ZFP91Q96JP5 570 aaPredicted RBP9.97□□□□□ -0.81
PSMC6-219ENST00000612399 PHF8Q9UPP1 1060 aa9.97□□□□□ -0.81
PSMC6-219ENST00000612399 RSF1Q96T23 1441 aaPredicted RBP9.97□□□□□ -0.81
PSMC6-219ENST00000612399 CC2D2AQ9P2K1 1620 aa9.95□□□□□ -0.82
PSMC6-219ENST00000612399 RNF25Q96BH1 459 aaPredicted RBP9.95□□□□□ -0.82
PSMC6-219ENST00000612399 EIF4G1Q04637 1599 aaKnown RBP9.94□□□□□ -0.82
PSMC6-219ENST00000612399 ARSIQ5FYB1 569 aa9.93□□□□□ -0.82
PSMC6-219ENST00000612399 ZNF316A6NFI3 1004 aaPredicted RBP9.92□□□□□ -0.82
PSMC6-219ENST00000612399 NLRP6P59044 892 aa9.92□□□□□ -0.82
PSMC6-219ENST00000612399 CECR2Q9BXF3 1484 aa9.91□□□□□ -0.82
PSMC6-219ENST00000612399 ANKRD13DQ6ZTN6 518 aa9.89□□□□□ -0.83
PSMC6-219ENST00000612399 TAOK2Q9UL54 1235 aa9.89□□□□□ -0.83
PSMC6-219ENST00000612399 LSM11P83369 360 aaKnown RBP eCLIP9.87□□□□□ -0.83
PSMC6-219ENST00000612399 FBXO22Q8NEZ5 403 aa9.86□□□□□ -0.83
PSMC6-219ENST00000612399 MYT1Q01538 1121 aa9.85□□□□□ -0.83
PSMC6-219ENST00000612399 KHSRPQ92945 711 aaKnown RBP eCLIP9.85□□□□□ -0.838e-7■■■■□ 19.3
PSMC6-219ENST00000612399 PBX2P40425 430 aa9.84□□□□□ -0.83
PSMC6-219ENST00000612399 BCL11BQ9C0K0 894 aaPredicted RBP9.83□□□□□ -0.84
PSMC6-219ENST00000612399 KIF3CO14782 793 aa9.81□□□□□ -0.84
PSMC6-219ENST00000612399 STK24Q9Y6E0 443 aa9.8□□□□□ -0.84
PSMC6-219ENST00000612399 C2orf72A6NCS6 295 aa9.79□□□□□ -0.84
PSMC6-219ENST00000612399 NUDT7P0C024 238 aa9.79□□□□□ -0.84
PSMC6-219ENST00000612399 MFRPQ9BY79 579 aa9.79□□□□□ -0.84
PSMC6-219ENST00000612399 BAZ1AQ9NRL2 1556 aaPredicted RBP9.78□□□□□ -0.84
PSMC6-219ENST00000612399 SLC34A2O95436 690 aa9.77□□□□□ -0.85
PSMC6-219ENST00000612399 LHX6Q9UPM6 363 aa9.75□□□□□ -0.85
PSMC6-219ENST00000612399 PCDHGA4Q9Y5G9 962 aa9.75□□□□□ -0.85
PSMC6-219ENST00000612399 WRNQ14191 1432 aaPredicted RBP eCLIP9.74□□□□□ -0.85
PSMC6-219ENST00000612399 STK25O00506 426 aa9.73□□□□□ -0.85
PSMC6-219ENST00000612399 POTEEQ6S8J3 1075 aa9.72□□□□□ -0.85
PSMC6-219ENST00000612399 TMC2Q8TDI7 906 aa9.72□□□□□ -0.85
PSMC6-219ENST00000612399 HCSTQ9UBK5 93 aa9.72□□□□□ -0.85
PSMC6-219ENST00000612399 PSDA5PKW4 1024 aaPredicted RBP9.71□□□□□ -0.85
PSMC6-219ENST00000612399 AXIN2Q9Y2T1 843 aa9.71□□□□□ -0.85
PSMC6-219ENST00000612399 CENPBP07199 599 aaPredicted RBP9.71□□□□□ -0.86
PSMC6-219ENST00000612399 PLA2G2EQ9NZK7 142 aa9.71□□□□□ -0.86
PSMC6-219ENST00000612399 MROH2BQ7Z745 1585 aa9.71□□□□□ -0.86
PSMC6-219ENST00000612399 ACIN1Q9UKV3 1341 aaKnown RBP9.7□□□□□ -0.86
PSMC6-219ENST00000612399 ARHGAP33O14559 1287 aa9.68□□□□□ -0.86
PSMC6-219ENST00000612399 WIZO95785 1651 aa9.67□□□□□ -0.86
PSMC6-219ENST00000612399 ADGRD1Q6QNK2 874 aa9.67□□□□□ -0.86
PSMC6-219ENST00000612399 EEA1Q15075 1411 aa9.67□□□□□ -0.86
PSMC6-219ENST00000612399 ECM2O94769 699 aaPredicted RBP9.66□□□□□ -0.86
PSMC6-219ENST00000612399 TOP2AP11388 1531 aaKnown RBP9.64□□□□□ -0.87
PSMC6-219ENST00000612399 TK2O00142 265 aa9.64□□□□□ -0.87
PSMC6-219ENST00000612399 CCER1Q8TC90 406 aaPredicted RBP9.64□□□□□ -0.87
PSMC6-219ENST00000612399 FAM9AQ8IZU1 332 aaPredicted RBP9.63□□□□□ -0.87
PSMC6-219ENST00000612399 NCAPD3P42695 1498 aa9.62□□□□□ -0.87
PSMC6-219ENST00000612399 SMARCA4P51532 1647 aa9.62□□□□□ -0.87
PSMC6-219ENST00000612399 PTCD2Q8WV60 388 aaKnown RBP9.61□□□□□ -0.87
PSMC6-219ENST00000612399 KDM4FA0A1W2PPD8 638 aa9.6□□□□□ -0.87
PSMC6-219ENST00000612399 ATAD2BQ9ULI0 1458 aa9.6□□□□□ -0.87
PSMC6-219ENST00000612399 TNIKQ9UKE5 1360 aa9.59□□□□□ -0.87
PSMC6-219ENST00000612399 DIEXFQ68CQ4 756 aaKnown RBP9.59□□□□□ -0.87
PSMC6-219ENST00000612399 HRO43593 1189 aa9.58□□□□□ -0.88
PSMC6-219ENST00000612399 CEP162Q5TB80 1403 aa9.58□□□□□ -0.88
PSMC6-219ENST00000612399 SMARCA2P51531 1590 aa9.57□□□□□ -0.88
PSMC6-219ENST00000612399 PPP4R3BQ5MIZ7 849 aa9.57□□□□□ -0.88
PSMC6-219ENST00000612399 DMRTA1Q5VZB9 504 aa9.57□□□□□ -0.88
PSMC6-219ENST00000612399 HMGXB3Q12766 1538 aa9.56□□□□□ -0.88
PSMC6-219ENST00000612399 PPP1R37O75864 691 aa9.56□□□□□ -0.88
PSMC6-219ENST00000612399 NEUROD1Q13562 356 aa9.56□□□□□ -0.88
PSMC6-219ENST00000612399 RGL2O15211 777 aa9.55□□□□□ -0.88
PSMC6-219ENST00000612399 PSEN2P49810 448 aa9.55□□□□□ -0.88
PSMC6-219ENST00000612399 FOXK1P85037 733 aa9.55□□□□□ -0.88
PSMC6-219ENST00000612399 STAC3Q96MF2 364 aa9.55□□□□□ -0.88
PSMC6-219ENST00000612399 TBC1D12O60347 775 aa9.54□□□□□ -0.88
PSMC6-219ENST00000612399 PLPP6Q8IY26 295 aa9.54□□□□□ -0.88
PSMC6-219ENST00000612399 KCNH8Q96L42 1107 aa9.54□□□□□ -0.88
PSMC6-219ENST00000612399 GOLGA3Q08378 1498 aa9.53□□□□□ -0.88
PSMC6-219ENST00000612399 KCTD12Q96CX2 325 aaKnown RBP9.53□□□□□ -0.88
PSMC6-219ENST00000612399 PEG3Q9GZU2 1588 aa9.52□□□□□ -0.89
PSMC6-219ENST00000612399 GTF3C3Q9Y5Q9 886 aa9.52□□□□□ -0.89
PSMC6-219ENST00000612399 PKD2Q13563 968 aa9.51□□□□□ -0.89
PSMC6-219ENST00000612399 GPHNQ9NQX3 736 aaPredicted RBP9.51□□□□□ -0.89
PSMC6-219ENST00000612399 BAZ1BQ9UIG0 1483 aaKnown RBP9.51□□□□□ -0.89
PSMC6-219ENST00000612399 KIF21BO75037 1637 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms