RNA–Protein interactions for RNA: ENST00000612349.1

SMAD6-205, Transcript of SMAD family member 6, humanhuman

Gene SMAD6, Length 5,198 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-205ENST00000612349 RAPGEF2Q9Y4G8 1499 aa26.74■■□□□ 1.87
SMAD6-205ENST00000612349 FOXD1Q16676 465 aa26.73■■□□□ 1.87
SMAD6-205ENST00000612349 RGS3P49796 1198 aa26.72■■□□□ 1.87
SMAD6-205ENST00000612349 CCER2I3L3R5 266 aa26.71■■□□□ 1.87
SMAD6-205ENST00000612349 SAFB2Q14151 953 aaKnown RBP eCLIP26.7■■□□□ 1.87
SMAD6-205ENST00000612349 RSPH4AQ5TD94 716 aa26.7■■□□□ 1.86
SMAD6-205ENST00000612349 RTF1Q92541 710 aaKnown RBP26.69■■□□□ 1.86
SMAD6-205ENST00000612349 NUP155O75694 1391 aa26.69■■□□□ 1.86
SMAD6-205ENST00000612349 MPHOSPH9Q99550 1183 aa26.69■■□□□ 1.86
SMAD6-205ENST00000612349 FGD1P98174 961 aa26.68■■□□□ 1.86
SMAD6-205ENST00000612349 SOX12O15370 315 aa26.68■■□□□ 1.86
SMAD6-205ENST00000612349 GOLGA2Q08379 1002 aa26.68■■□□□ 1.86
SMAD6-205ENST00000612349 HSPA5P11021 654 aaKnown RBP26.67■■□□□ 1.86
SMAD6-205ENST00000612349 JPH4Q96JJ6 628 aa26.67■■□□□ 1.86
SMAD6-205ENST00000612349 STK26Q9P289 416 aa26.67■■□□□ 1.86
SMAD6-205ENST00000612349 FHOD3Q2V2M9 1422 aa26.67■■□□□ 1.86
SMAD6-205ENST00000612349 KTN1Q86UP2 1357 aaKnown RBP26.67■■□□□ 1.86
SMAD6-205ENST00000612349 KCNJ4P48050 445 aa26.67■■□□□ 1.86
SMAD6-205ENST00000612349 RAB3GAP2Q9H2M9 1393 aa26.66■■□□□ 1.86
SMAD6-205ENST00000612349 CFAP44Q96MT7 982 aa26.64■■□□□ 1.85
SMAD6-205ENST00000612349 CALD1Q05682 793 aaKnown RBP26.63■■□□□ 1.85
SMAD6-205ENST00000612349 PTMAP06454 111 aaKnown RBP26.62■■□□□ 1.85
SMAD6-205ENST00000612349 CHMP4AQ9BY43 222 aa26.62■■□□□ 1.85
SMAD6-205ENST00000612349 SMARCA4P51532 1647 aa26.62■■□□□ 1.85
SMAD6-205ENST00000612349 IPO8O15397 1037 aaKnown RBP26.6■■□□□ 1.85
SMAD6-205ENST00000612349 KIF3BO15066 747 aa26.59■■□□□ 1.85
SMAD6-205ENST00000612349 ROCK2O75116 1388 aaKnown RBP26.59■■□□□ 1.85
SMAD6-205ENST00000612349 HNRNPMP52272 730 aaKnown RBP eCLIP26.58■■□□□ 1.85
SMAD6-205ENST00000612349 EIF3AQ14152 1382 aaKnown RBP26.58■■□□□ 1.85
SMAD6-205ENST00000612349 RALBP1Q15311 655 aa26.56■■□□□ 1.84
SMAD6-205ENST00000612349 HSP90AB1P08238 724 aaKnown RBP26.56■■□□□ 1.84
SMAD6-205ENST00000612349 FANCD2Q9BXW9 1451 aa26.56■■□□□ 1.84
SMAD6-205ENST00000612349 SPAG9O60271 1321 aaKnown RBP26.54■■□□□ 1.84
SMAD6-205ENST00000612349 MCCP23508 829 aa26.53■■□□□ 1.84
SMAD6-205ENST00000612349 CCDC18Q5T9S5 1454 aa26.52■■□□□ 1.84
SMAD6-205ENST00000612349 U2AF1L5P0DN76 240 aaPredicted RBP26.51■■□□□ 1.83
SMAD6-205ENST00000612349 U2AF1Q01081 240 aaKnown RBP eCLIP26.51■■□□□ 1.83
SMAD6-205ENST00000612349 PAK3O75914 559 aaPredicted RBP26.51■■□□□ 1.83
SMAD6-205ENST00000612349 EID1Q9Y6B2 187 aa26.51■■□□□ 1.83
SMAD6-205ENST00000612349 TERF2IPQ9NYB0 399 aa26.5■■□□□ 1.83
SMAD6-205ENST00000612349 CSB-PGBD3P0DP91 1061 aa26.48■■□□□ 1.83
SMAD6-205ENST00000612349 NAP1L2Q9ULW6 460 aaPredicted RBP26.46■■□□□ 1.83
SMAD6-205ENST00000612349 B4GALNT3Q6L9W6 998 aa26.46■■□□□ 1.83
SMAD6-205ENST00000612349 WASHC2CQ9Y4E1 1318 aa26.46■■□□□ 1.83
SMAD6-205ENST00000612349 HSCBQ8IWL3 235 aa26.45■■□□□ 1.83
SMAD6-205ENST00000612349 TPRNQ4KMQ1 711 aa26.44■■□□□ 1.82
SMAD6-205ENST00000612349 GOLGA6L4A6NEF3 574 aa26.43■■□□□ 1.82
SMAD6-205ENST00000612349 GOLGA6L6A8MZA4 724 aa26.43■■□□□ 1.82
SMAD6-205ENST00000612349 L3MBTL2Q969R5 705 aa26.42■■□□□ 1.82
SMAD6-205ENST00000612349 NRDCO43847 1150 aa26.42■■□□□ 1.82
SMAD6-205ENST00000612349 RUSC2Q8N2Y8 1516 aa26.41■■□□□ 1.82
SMAD6-205ENST00000612349 DNTTIP2Q5QJE6 756 aaKnown RBP26.4■■□□□ 1.82
SMAD6-205ENST00000612349 HDAC5Q9UQL6 1122 aa26.4■■□□□ 1.82
SMAD6-205ENST00000612349 ERICH6BQ5W0A0 696 aa26.39■■□□□ 1.82
SMAD6-205ENST00000612349 NOP58Q9Y2X3 529 aaKnown RBP26.37■■□□□ 1.81
SMAD6-205ENST00000612349 TAOK2Q9UL54 1235 aa26.37■■□□□ 1.81
SMAD6-205ENST00000612349 PTPRGP23470 1445 aa26.36■■□□□ 1.81
SMAD6-205ENST00000612349 STK31Q9BXU1 1019 aa26.36■■□□□ 1.81
SMAD6-205ENST00000612349 TULP1O00294 542 aaPredicted RBP26.35■■□□□ 1.81
SMAD6-205ENST00000612349 RWDD1Q9H446 243 aaPredicted RBP26.35■■□□□ 1.81
SMAD6-205ENST00000612349 KIAA1211Q6ZU35 1233 aa26.35■■□□□ 1.81
SMAD6-205ENST00000612349 PLCB2Q00722 1185 aa26.34■■□□□ 1.81
SMAD6-205ENST00000612349 RCAN3Q9UKA8 241 aa26.34■■□□□ 1.81
SMAD6-205ENST00000612349 NGDNQ8NEJ9 315 aaKnown RBP26.33■■□□□ 1.81
SMAD6-205ENST00000612349 LMOD3Q0VAK6 560 aa26.3■■□□□ 1.8
SMAD6-205ENST00000612349 NLRP13Q86W25 1043 aa26.29■■□□□ 1.8
SMAD6-205ENST00000612349 ITPRIPQ8IWB1 547 aa26.27■■□□□ 1.8
SMAD6-205ENST00000612349 IGF1RP08069 1367 aa26.26■■□□□ 1.79
SMAD6-205ENST00000612349 NUTM2DQ5VT03 806 aaPredicted RBP26.25■■□□□ 1.79
SMAD6-205ENST00000612349 ZNF330Q9Y3S2 320 aaPredicted RBP26.25■■□□□ 1.79
SMAD6-205ENST00000612349 FGD5Q6ZNL6 1462 aa26.25■■□□□ 1.79
SMAD6-205ENST00000612349 UACAQ9BZF9 1416 aa26.24■■□□□ 1.79
SMAD6-205ENST00000612349 GAPVD1Q14C86 1478 aa26.24■■□□□ 1.79
SMAD6-205ENST00000612349 APBB1O00213 710 aa26.24■■□□□ 1.79
SMAD6-205ENST00000612349 HMMRO75330 724 aa26.23■■□□□ 1.79
SMAD6-205ENST00000612349 TMX4Q9H1E5 349 aaPredicted RBP26.23■■□□□ 1.79
SMAD6-205ENST00000612349 AMPHP49418 695 aa26.23■■□□□ 1.79
SMAD6-205ENST00000612349 PHLDB1Q86UU1 1377 aa26.22■■□□□ 1.79
SMAD6-205ENST00000612349 PDE3BQ13370 1112 aa26.22■■□□□ 1.79
SMAD6-205ENST00000612349 PMFBP1Q8TBY8 1022 aa26.22■■□□□ 1.79
SMAD6-205ENST00000612349 OSCARQ8IYS5 282 aa26.22■■□□□ 1.79
SMAD6-205ENST00000612349 CYB5RLQ6IPT4 315 aa26.21■■□□□ 1.79
SMAD6-205ENST00000612349 CCDC144AA2RUR9 1427 aa26.21■■□□□ 1.79
SMAD6-205ENST00000612349 ISY1Q9ULR0 285 aaKnown RBP26.2■■□□□ 1.78
SMAD6-205ENST00000612349 SMC4Q9NTJ3 1288 aa26.2■■□□□ 1.78
SMAD6-205ENST00000612349 VGFO15240 615 aaPredicted RBP26.19■■□□□ 1.78
SMAD6-205ENST00000612349 CCDC9Q9Y3X0 531 aaKnown RBP26.19■■□□□ 1.78
SMAD6-205ENST00000612349 RBM19Q9Y4C8 960 aaKnown RBP26.19■■□□□ 1.78
SMAD6-205ENST00000612349 RTN4Q9NQC3 1192 aaKnown RBP26.19■■□□□ 1.78
SMAD6-205ENST00000612349 GNL2Q13823 731 aaKnown RBP26.19■■□□□ 1.78
SMAD6-205ENST00000612349 GPATCH3Q96I76 525 aa26.18■■□□□ 1.78
SMAD6-205ENST00000612349 NCAPD3P42695 1498 aa26.17■■□□□ 1.78
SMAD6-205ENST00000612349 RAD54L2Q9Y4B4 1467 aa26.17■■□□□ 1.78
SMAD6-205ENST00000612349 GORABQ5T7V8 394 aa26.17■■□□□ 1.78
SMAD6-205ENST00000612349 TRAK1Q9UPV9 953 aa26.16■■□□□ 1.78
SMAD6-205ENST00000612349 TCERG1O14776 1098 aaKnown RBP26.15■■□□□ 1.78
SMAD6-205ENST00000612349 TAF7LQ5H9L4 462 aa26.14■■□□□ 1.77
SMAD6-205ENST00000612349 PTMSP20962 102 aa26.13■■□□□ 1.77
SMAD6-205ENST00000612349 DEKP35659 375 aaKnown RBP26.13■■□□□ 1.77
SMAD6-205ENST00000612349 HTATSF1O43719 755 aaKnown RBP26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms