RNA–Protein interactions for RNA: ENST00000612155.1

SRRM3-205, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 1 (best)

Gene SRRM3, Length 2,150 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-205ENST00000612155 TSPOAP1O95153 1857 aa29.61■■■□□ 2.33
SRRM3-205ENST00000612155 GLI2P10070 1586 aa29.59■■■□□ 2.33
SRRM3-205ENST00000612155 ARHGAP5Q13017 1502 aa29.59■■■□□ 2.33
SRRM3-205ENST00000612155 FGD6Q6ZV73 1430 aa29.59■■■□□ 2.33
SRRM3-205ENST00000612155 PREX2Q70Z35 1606 aa29.58■■■□□ 2.33
SRRM3-205ENST00000612155 PLCH2O75038 1416 aa29.58■■■□□ 2.33
SRRM3-205ENST00000612155 CCER1Q8TC90 406 aaPredicted RBP29.58■■■□□ 2.33
SRRM3-205ENST00000612155 MAP3K4Q9Y6R4 1608 aa29.57■■■□□ 2.32
SRRM3-205ENST00000612155 FAM50AQ14320 339 aaKnown RBP29.57■■■□□ 2.32
SRRM3-205ENST00000612155 ITSN2Q9NZM3 1697 aa29.56■■■□□ 2.32
SRRM3-205ENST00000612155 PTPN23Q9H3S7 1636 aa29.51■■■□□ 2.31
SRRM3-205ENST00000612155 FANCAO15360 1455 aa29.5■■■□□ 2.31
SRRM3-205ENST00000612155 ITGAEP38570 1179 aa29.5■■■□□ 2.31
SRRM3-205ENST00000612155 EFCAB2Q5VUJ9 269 aa29.49■■■□□ 2.31
SRRM3-205ENST00000612155 RRBP1Q9P2E9 1410 aaKnown RBP29.49■■■□□ 2.31
SRRM3-205ENST00000612155 MIA2Q96PC5 1412 aa29.48■■■□□ 2.31
SRRM3-205ENST00000612155 PPRC1Q5VV67 1664 aaKnown RBP29.47■■■□□ 2.31
SRRM3-205ENST00000612155 SAMD9LQ8IVG5 1584 aa29.47■■■□□ 2.31
SRRM3-205ENST00000612155 CAMSAP2Q08AD1 1489 aa29.47■■■□□ 2.31
SRRM3-205ENST00000612155 HNRNPMP52272 730 aaKnown RBP eCLIP29.46■■■□□ 2.31
SRRM3-205ENST00000612155 ARAP3Q8WWN8 1544 aa29.41■■■□□ 2.3
SRRM3-205ENST00000612155 AKNAQ7Z591 1439 aa29.4■■■□□ 2.3
SRRM3-205ENST00000612155 ARHGEF12Q9NZN5 1544 aa29.39■■■□□ 2.3
SRRM3-205ENST00000612155 TCOF1Q13428 1488 aaKnown RBP29.39■■■□□ 2.3
SRRM3-205ENST00000612155 SYCP2Q9BX26 1530 aa29.39■■■□□ 2.29
SRRM3-205ENST00000612155 ADGRL1O94910 1474 aa29.36■■■□□ 2.29
SRRM3-205ENST00000612155 SCAPERQ9BY12 1400 aa29.34■■■□□ 2.29
SRRM3-205ENST00000612155 ABCC1P33527 1531 aa29.33■■■□□ 2.29
SRRM3-205ENST00000612155 AFAP1Q8N556 730 aa29.32■■■□□ 2.28
SRRM3-205ENST00000612155 CHIC2Q9UKJ5 165 aa29.32■■■□□ 2.28
SRRM3-205ENST00000612155 TEX14Q8IWB6 1497 aa29.31■■■□□ 2.28
SRRM3-205ENST00000612155 TRAPPC8Q9Y2L5 1435 aa29.31■■■□□ 2.28
SRRM3-205ENST00000612155 NEO1Q92859 1461 aa29.31■■■□□ 2.28
SRRM3-205ENST00000612155 MBD5Q9P267 1494 aa29.31■■■□□ 2.28
SRRM3-205ENST00000612155 RAPGEF3O95398 923 aa29.3■■■□□ 2.28
SRRM3-205ENST00000612155 CFAP74Q9C0B2 1584 aa29.29■■■□□ 2.28
SRRM3-205ENST00000612155 PTPRKQ15262 1439 aa29.29■■■□□ 2.28
SRRM3-205ENST00000612155 ABCC5O15440 1437 aa29.27■■■□□ 2.28
SRRM3-205ENST00000612155 DAPK1P53355 1430 aa29.26■■■□□ 2.27
SRRM3-205ENST00000612155 KIAA1107Q9UPP5 1409 aa29.25■■■□□ 2.27
SRRM3-205ENST00000612155 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.25■■■□□ 2.27
SRRM3-205ENST00000612155 PLEKHH2Q8IVE3 1493 aa29.25■■■□□ 2.27
SRRM3-205ENST00000612155 COL17A1Q9UMD9 1497 aaPredicted RBP29.25■■■□□ 2.27
SRRM3-205ENST00000612155 DNMT1P26358 1616 aaKnown RBP29.23■■■□□ 2.27
SRRM3-205ENST00000612155 CCDC141Q6ZP82 1450 aa29.21■■■□□ 2.27
SRRM3-205ENST00000612155 DENND4BO75064 1496 aaPredicted RBP29.19■■■□□ 2.26
SRRM3-205ENST00000612155 ARHGEF5Q12774 1597 aa29.18■■■□□ 2.26
SRRM3-205ENST00000612155 POGZQ7Z3K3 1410 aa29.18■■■□□ 2.26
SRRM3-205ENST00000612155 MYT1LQ9UL68 1186 aa29.18■■■□□ 2.26
SRRM3-205ENST00000612155 TSPY4P0CV99 314 aa29.17■■■□□ 2.26
SRRM3-205ENST00000612155 TSPY10P0CW01 314 aa29.17■■■□□ 2.26
SRRM3-205ENST00000612155 RRP7BPQ9NSQ0 103 aa29.15■■■□□ 2.26
SRRM3-205ENST00000612155 CROCC2H7BZ55 1655 aa29.15■■■□□ 2.26
SRRM3-205ENST00000612155 C9orf84Q5VXU9 1444 aa29.14■■■□□ 2.25
SRRM3-205ENST00000612155 FRMPD1Q5SYB0 1578 aa29.13■■■□□ 2.25
SRRM3-205ENST00000612155 ZNF518AQ6AHZ1 1483 aa29.13■■■□□ 2.25
SRRM3-205ENST00000612155 RICTORQ6R327 1708 aa29.13■■■□□ 2.25
SRRM3-205ENST00000612155 SPAG9O60271 1321 aaKnown RBP29.12■■■□□ 2.25
SRRM3-205ENST00000612155 RSPH4AQ5TD94 716 aa29.12■■■□□ 2.25
SRRM3-205ENST00000612155 KDM6BO15054 1643 aa29.07■■■□□ 2.24
SRRM3-205ENST00000612155 KDM5CP41229 1560 aa29.06■■■□□ 2.24
SRRM3-205ENST00000612155 SHANK2Q9UPX8 1470 aa29.05■■■□□ 2.24
SRRM3-205ENST00000612155 ZFYVE16Q7Z3T8 1539 aa29.04■■■□□ 2.24
SRRM3-205ENST00000612155 ATP7AQ04656 1500 aa29.02■■■□□ 2.24
SRRM3-205ENST00000612155 KIDINS220Q9ULH0 1771 aa29.02■■■□□ 2.24
SRRM3-205ENST00000612155 NCOA1Q15788 1441 aa29.02■■■□□ 2.24
SRRM3-205ENST00000612155 YEATS2Q9ULM3 1422 aa29.02■■■□□ 2.24
SRRM3-205ENST00000612155 INO80Q9ULG1 1556 aaPredicted RBP29.01■■■□□ 2.23
SRRM3-205ENST00000612155 ADGBQ8N7X0 1667 aa29■■■□□ 2.23
SRRM3-205ENST00000612155 HECW2Q9P2P5 1572 aa29■■■□□ 2.23
SRRM3-205ENST00000612155 MAST1Q9Y2H9 1570 aa28.99■■■□□ 2.23
SRRM3-205ENST00000612155 ANKRD30AQ9BXX3 1397 aa28.99■■■□□ 2.23
SRRM3-205ENST00000612155 DHX57Q6P158 1386 aaKnown RBP28.97■■■□□ 2.23
SRRM3-205ENST00000612155 KIF15Q9NS87 1388 aa28.97■■■□□ 2.23
SRRM3-205ENST00000612155 ADGRL2O95490 1459 aa28.97■■■□□ 2.23
SRRM3-205ENST00000612155 MLH3Q9UHC1 1453 aa28.96■■■□□ 2.23
SRRM3-205ENST00000612155 RTEL1-TNFRSF6BF6WH68 1400 aa28.95■■■□□ 2.23
SRRM3-205ENST00000612155 NAIPQ13075 1403 aa28.95■■■□□ 2.23
SRRM3-205ENST00000612155 ROCK1Q13464 1354 aa28.95■■■□□ 2.23
SRRM3-205ENST00000612155 ZMYM4Q5VZL5 1548 aa28.94■■■□□ 2.22
SRRM3-205ENST00000612155 ABCA6Q8N139 1617 aa28.94■■■□□ 2.22
SRRM3-205ENST00000612155 HFM1A2PYH4 1435 aa28.92■■■□□ 2.22
SRRM3-205ENST00000612155 PLXNC1O60486 1568 aa28.9■■■□□ 2.22
SRRM3-205ENST00000612155 DIP2CQ9Y2E4 1556 aa28.89■■■□□ 2.22
SRRM3-205ENST00000612155 SETD5Q9C0A6 1442 aa28.88■■■□□ 2.21
SRRM3-205ENST00000612155 RAB3GAP2Q9H2M9 1393 aa28.87■■■□□ 2.21
SRRM3-205ENST00000612155 GCC2Q8IWJ2 1684 aa28.86■■■□□ 2.21
SRRM3-205ENST00000612155 ANKRD50Q9ULJ7 1429 aa28.85■■■□□ 2.21
SRRM3-205ENST00000612155 MAGI2Q86UL8 1455 aa28.84■■■□□ 2.21
SRRM3-205ENST00000612155 A2MP01023 1474 aa28.82■■■□□ 2.2
SRRM3-205ENST00000612155 DUOX2Q9NRD8 1548 aa28.82■■■□□ 2.2
SRRM3-205ENST00000612155 DHX29Q7Z478 1369 aaKnown RBP28.8■■■□□ 2.2
SRRM3-205ENST00000612155 ARHGEF40Q8TER5 1519 aa28.8■■■□□ 2.2
SRRM3-205ENST00000612155 SIGLEC1Q9BZZ2 1709 aa28.79■■■□□ 2.2
SRRM3-205ENST00000612155 ATP10AO60312 1499 aa28.79■■■□□ 2.2
SRRM3-205ENST00000612155 CLSPNQ9HAW4 1339 aa28.79■■■□□ 2.2
SRRM3-205ENST00000612155 KIF3BO15066 747 aa28.78■■■□□ 2.2
SRRM3-205ENST00000612155 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.75■■■□□ 2.19
SRRM3-205ENST00000612155 TRIM52Q96A61 297 aa28.74■■■□□ 2.19
SRRM3-205ENST00000612155 ERBINQ96RT1 1412 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms