RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 DDX10Q13206 875 aaKnown RBP15.2■□□□□ 0.02
PCDHGC3-202ENST00000611950 BCANQ96GW7 911 aa15.2■□□□□ 0.02
PCDHGC3-202ENST00000611950 SUPT16HQ9Y5B9 1047 aaKnown RBP15.18■□□□□ 0.02
PCDHGC3-202ENST00000611950 CARMIL2Q6F5E8 1435 aa15.18■□□□□ 0.02
PCDHGC3-202ENST00000611950 FMN1Q68DA7 1419 aa15.17■□□□□ 0.02
PCDHGC3-202ENST00000611950 SAMD9Q5K651 1589 aa15.16■□□□□ 0.02
PCDHGC3-202ENST00000611950 ABCC2Q92887 1545 aa15.15■□□□□ 0.02
PCDHGC3-202ENST00000611950 ASXL2Q76L83 1435 aa15.15■□□□□ 0.02
PCDHGC3-202ENST00000611950 CCDC136Q96JN2 1154 aa15.14■□□□□ 0.01
PCDHGC3-202ENST00000611950 IQGAP2Q13576 1575 aa15.14■□□□□ 0.01
PCDHGC3-202ENST00000611950 LRRIQ1Q96JM4 1722 aa15.13■□□□□ 0.01
PCDHGC3-202ENST00000611950 PLB1Q6P1J6 1458 aa15.11■□□□□ 0.01
PCDHGC3-202ENST00000611950 FGD6Q6ZV73 1430 aa15.11■□□□□ 0.01
PCDHGC3-202ENST00000611950 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.11■□□□□ 0.01
PCDHGC3-202ENST00000611950 PPRC1Q5VV67 1664 aaKnown RBP15.1■□□□□ 0.01
PCDHGC3-202ENST00000611950 MTUS2Q5JR59 1369 aa15.09■□□□□ 0.01
PCDHGC3-202ENST00000611950 UACAQ9BZF9 1416 aa15.09■□□□□ 0.01
PCDHGC3-202ENST00000611950 PDIA4P13667 645 aaKnown RBP15.08■□□□□ 0
PCDHGC3-202ENST00000611950 GLI2P10070 1586 aa15.07■□□□□ 0
PCDHGC3-202ENST00000611950 PTPRKQ15262 1439 aa15.06■□□□□ 0
PCDHGC3-202ENST00000611950 ARID3CA6NKF2 412 aa15.06■□□□□ 0
PCDHGC3-202ENST00000611950 TRIM52Q96A61 297 aa15.06■□□□□ 0
PCDHGC3-202ENST00000611950 TIMELESSQ9UNS1 1208 aa15.06■□□□□ 0
PCDHGC3-202ENST00000611950 DISP1Q96F81 1524 aa15.06■□□□□ 0
PCDHGC3-202ENST00000611950 UHRF1BP1LA0JNW5 1464 aa15.06■□□□□ 0
PCDHGC3-202ENST00000611950 ADGRL1O94910 1474 aa15.06■□□□□ 0
PCDHGC3-202ENST00000611950 NCOA2Q15596 1464 aa15.05■□□□□ 0
PCDHGC3-202ENST00000611950 NEFLP07196 543 aa15.04■□□□□ -0
PCDHGC3-202ENST00000611950 ILDR1Q86SU0 546 aaPredicted RBP15.04■□□□□ -0
PCDHGC3-202ENST00000611950 COL17A1Q9UMD9 1497 aaPredicted RBP15.03■□□□□ -0
PCDHGC3-202ENST00000611950 EPRSP07814 1512 aaKnown RBP15.03■□□□□ -0
PCDHGC3-202ENST00000611950 PDE4CQ08493 712 aa15.03■□□□□ -0
PCDHGC3-202ENST00000611950 ZCCHC11Q5TAX3 1644 aaKnown RBP15.02■□□□□ -0
PCDHGC3-202ENST00000611950 ERICH6BQ5W0A0 696 aa15.02■□□□□ -0
PCDHGC3-202ENST00000611950 MAGI3Q5TCQ9 1506 aa15.02□□□□□ -0.01
PCDHGC3-202ENST00000611950 KDM5BQ9UGL1 1544 aa15.01□□□□□ -0.01
PCDHGC3-202ENST00000611950 MYOM3Q5VTT5 1437 aa15.01□□□□□ -0.01
PCDHGC3-202ENST00000611950 MAP3K4Q9Y6R4 1608 aa15.01□□□□□ -0.01
PCDHGC3-202ENST00000611950 CCDC18Q5T9S5 1454 aa15□□□□□ -0.01
PCDHGC3-202ENST00000611950 EHBP1L1Q8N3D4 1523 aa15□□□□□ -0.01
PCDHGC3-202ENST00000611950 FKBP8Q14318 412 aa15□□□□□ -0.01
PCDHGC3-202ENST00000611950 TEX14Q8IWB6 1497 aa15□□□□□ -0.01
PCDHGC3-202ENST00000611950 HFM1A2PYH4 1435 aa15□□□□□ -0.01
PCDHGC3-202ENST00000611950 SUPT6HQ7KZ85 1726 aaKnown RBP14.99□□□□□ -0.01
PCDHGC3-202ENST00000611950 KIAA0556O60303 1618 aa14.99□□□□□ -0.01
PCDHGC3-202ENST00000611950 UGGT2Q9NYU1 1516 aa14.99□□□□□ -0.01
PCDHGC3-202ENST00000611950 PTPN23Q9H3S7 1636 aa14.99□□□□□ -0.01
PCDHGC3-202ENST00000611950 CHIC2Q9UKJ5 165 aa14.98□□□□□ -0.01
PCDHGC3-202ENST00000611950 TSHZ2Q9NRE2 1034 aa14.97□□□□□ -0.01
PCDHGC3-202ENST00000611950 NAIPQ13075 1403 aa14.97□□□□□ -0.01
PCDHGC3-202ENST00000611950 PPP1R15AO75807 674 aaPredicted RBP14.95□□□□□ -0.02
PCDHGC3-202ENST00000611950 WDR7Q9Y4E6 1490 aa14.95□□□□□ -0.02
PCDHGC3-202ENST00000611950 RRP7BPQ9NSQ0 103 aa14.93□□□□□ -0.02
PCDHGC3-202ENST00000611950 HECW1Q76N89 1606 aa14.93□□□□□ -0.02
PCDHGC3-202ENST00000611950 HECW2Q9P2P5 1572 aa14.93□□□□□ -0.02
PCDHGC3-202ENST00000611950 TONSLQ96HA7 1378 aa14.93□□□□□ -0.02
PCDHGC3-202ENST00000611950 CDK13Q14004 1512 aaKnown RBP14.92□□□□□ -0.02
PCDHGC3-202ENST00000611950 ANP32CO43423 234 aa14.91□□□□□ -0.02
PCDHGC3-202ENST00000611950 CD109Q6YHK3 1445 aa14.91□□□□□ -0.02
PCDHGC3-202ENST00000611950 TCOF1Q13428 1488 aaKnown RBP14.89□□□□□ -0.03
PCDHGC3-202ENST00000611950 CNGB1Q14028 1251 aaPredicted RBP14.88□□□□□ -0.03
PCDHGC3-202ENST00000611950 IRX6P78412 446 aaPredicted RBP14.87□□□□□ -0.03
PCDHGC3-202ENST00000611950 FOXD1Q16676 465 aa14.87□□□□□ -0.03
PCDHGC3-202ENST00000611950 FGD1P98174 961 aa14.86□□□□□ -0.03
PCDHGC3-202ENST00000611950 ABCA8O94911 1581 aa14.85□□□□□ -0.03
PCDHGC3-202ENST00000611950 DENND4BO75064 1496 aaPredicted RBP14.84□□□□□ -0.03
PCDHGC3-202ENST00000611950 GCC2Q8IWJ2 1684 aa14.83□□□□□ -0.03
PCDHGC3-202ENST00000611950 MIA2Q96PC5 1412 aa14.82□□□□□ -0.04
PCDHGC3-202ENST00000611950 BCL11BQ9C0K0 894 aaPredicted RBP14.81□□□□□ -0.04
PCDHGC3-202ENST00000611950 AKNAQ7Z591 1439 aa14.8□□□□□ -0.04
PCDHGC3-202ENST00000611950 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.8□□□□□ -0.04
PCDHGC3-202ENST00000611950 HNRNPUQ00839 825 aaKnown RBP eCLIP14.79□□□□□ -0.04
PCDHGC3-202ENST00000611950 NUP153P49790 1475 aaKnown RBP14.79□□□□□ -0.04
PCDHGC3-202ENST00000611950 MYT1LQ9UL68 1186 aa14.79□□□□□ -0.04
PCDHGC3-202ENST00000611950 TULP1O00294 542 aaPredicted RBP14.77□□□□□ -0.05
PCDHGC3-202ENST00000611950 SENP3-EIF4A1A0A087X0R7 540 aa14.76□□□□□ -0.05
PCDHGC3-202ENST00000611950 RAPGEF6Q8TEU7 1601 aa14.75□□□□□ -0.05
PCDHGC3-202ENST00000611950 ZNF644Q9H582 1327 aaPredicted RBP14.75□□□□□ -0.05
PCDHGC3-202ENST00000611950 ATP10BO94823 1461 aa14.75□□□□□ -0.05
PCDHGC3-202ENST00000611950 HSPA5P11021 654 aaKnown RBP14.74□□□□□ -0.05
PCDHGC3-202ENST00000611950 RAPGEF3O95398 923 aa14.74□□□□□ -0.05
PCDHGC3-202ENST00000611950 DAPK1P53355 1430 aa14.74□□□□□ -0.05
PCDHGC3-202ENST00000611950 ARAP3Q8WWN8 1544 aa14.74□□□□□ -0.05
PCDHGC3-202ENST00000611950 MPHOSPH9Q99550 1183 aa14.74□□□□□ -0.05
PCDHGC3-202ENST00000611950 ABCC5O15440 1437 aa14.73□□□□□ -0.05
PCDHGC3-202ENST00000611950 CCDC184Q52MB2 194 aa14.73□□□□□ -0.05
PCDHGC3-202ENST00000611950 SLC4A1APQ9BWU0 796 aaKnown RBP14.73□□□□□ -0.05
PCDHGC3-202ENST00000611950 CCER2I3L3R5 266 aa14.72□□□□□ -0.05
PCDHGC3-202ENST00000611950 POLR3GLQ9BT43 218 aa14.72□□□□□ -0.05
PCDHGC3-202ENST00000611950 ARID4BQ4LE39 1312 aaPredicted RBP14.71□□□□□ -0.05
PCDHGC3-202ENST00000611950 DNMT1P26358 1616 aaKnown RBP14.71□□□□□ -0.05
PCDHGC3-202ENST00000611950 WASHC2AQ641Q2 1341 aa14.71□□□□□ -0.06
PCDHGC3-202ENST00000611950 DEKP35659 375 aaKnown RBP14.7□□□□□ -0.06
PCDHGC3-202ENST00000611950 ABCA9Q8IUA7 1624 aa14.7□□□□□ -0.06
PCDHGC3-202ENST00000611950 ROCK1Q13464 1354 aa14.7□□□□□ -0.06
PCDHGC3-202ENST00000611950 FAM9BQ8IZU0 186 aa14.7□□□□□ -0.06
PCDHGC3-202ENST00000611950 TAF7LQ5H9L4 462 aa14.69□□□□□ -0.06
PCDHGC3-202ENST00000611950 PTPRMP28827 1452 aa14.69□□□□□ -0.06
PCDHGC3-202ENST00000611950 A0A0U1RQG5 324 aaPredicted RBP14.69□□□□□ -0.06
PCDHGC3-202ENST00000611950 AAMPQ13685 434 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms