RNA–Protein interactions for RNA: ENST00000611917.1

FAM228B-207, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 3

Gene FAM228B, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-207ENST00000611917 CFDP1Q9UEE9 299 aaPredicted RBP19.7■□□□□ 0.74
FAM228B-207ENST00000611917 ARHGAP5Q13017 1502 aa19.68■□□□□ 0.74
FAM228B-207ENST00000611917 APLP2Q06481 763 aa19.68■□□□□ 0.74
FAM228B-207ENST00000611917 MAGI2Q86UL8 1455 aa19.67■□□□□ 0.74
FAM228B-207ENST00000611917 CCNB3Q8WWL7 1395 aa19.67■□□□□ 0.74
FAM228B-207ENST00000611917 POGZQ7Z3K3 1410 aa19.62■□□□□ 0.73
FAM228B-207ENST00000611917 HNRNPMP52272 730 aaKnown RBP eCLIP19.61■□□□□ 0.73
FAM228B-207ENST00000611917 LRRIQ1Q96JM4 1722 aa19.61■□□□□ 0.73
FAM228B-207ENST00000611917 MYO5CQ9NQX4 1742 aa19.61■□□□□ 0.73
FAM228B-207ENST00000611917 ZNF518AQ6AHZ1 1483 aa19.6■□□□□ 0.73
FAM228B-207ENST00000611917 VPS8Q8N3P4 1428 aa19.59■□□□□ 0.73
FAM228B-207ENST00000611917 MLECQ14165 292 aa19.59■□□□□ 0.73
FAM228B-207ENST00000611917 GPATCH8Q9UKJ3 1502 aaKnown RBP19.59■□□□□ 0.73
FAM228B-207ENST00000611917 ATP10AO60312 1499 aa19.58■□□□□ 0.72
FAM228B-207ENST00000611917 YEATS2Q9ULM3 1422 aa19.57■□□□□ 0.72
FAM228B-207ENST00000611917 FRMPD1Q5SYB0 1578 aa19.57■□□□□ 0.72
FAM228B-207ENST00000611917 RSPH4AQ5TD94 716 aa19.56■□□□□ 0.72
FAM228B-207ENST00000611917 ZFYVE16Q7Z3T8 1539 aa19.56■□□□□ 0.72
FAM228B-207ENST00000611917 SPAG9O60271 1321 aaKnown RBP19.55■□□□□ 0.72
FAM228B-207ENST00000611917 RICTORQ6R327 1708 aa19.55■□□□□ 0.72
FAM228B-207ENST00000611917 ZMYM4Q5VZL5 1548 aa19.55■□□□□ 0.72
FAM228B-207ENST00000611917 KIAA1107Q9UPP5 1409 aa19.53■□□□□ 0.72
FAM228B-207ENST00000611917 ESF1Q9H501 851 aaKnown RBP19.53■□□□□ 0.72
FAM228B-207ENST00000611917 PLEKHH2Q8IVE3 1493 aa19.53■□□□□ 0.72
FAM228B-207ENST00000611917 TRAPPC8Q9Y2L5 1435 aa19.52■□□□□ 0.72
FAM228B-207ENST00000611917 MLH3Q9UHC1 1453 aa19.51■□□□□ 0.71
FAM228B-207ENST00000611917 CDC42BPBQ9Y5S2 1711 aa19.51■□□□□ 0.71
FAM228B-207ENST00000611917 C9orf84Q5VXU9 1444 aa19.5■□□□□ 0.71
FAM228B-207ENST00000611917 ZNF644Q9H582 1327 aaPredicted RBP19.5■□□□□ 0.71
FAM228B-207ENST00000611917 KANK4Q5T7N3 995 aaPredicted RBP19.49■□□□□ 0.71
FAM228B-207ENST00000611917 PREX2Q70Z35 1606 aa19.49■□□□□ 0.71
FAM228B-207ENST00000611917 EHBP1L1Q8N3D4 1523 aa19.49■□□□□ 0.71
FAM228B-207ENST00000611917 ARHGEF40Q8TER5 1519 aa19.48■□□□□ 0.71
FAM228B-207ENST00000611917 ARHGEF12Q9NZN5 1544 aa19.48■□□□□ 0.71
FAM228B-207ENST00000611917 TSPY4P0CV99 314 aa19.48■□□□□ 0.71
FAM228B-207ENST00000611917 TSPY10P0CW01 314 aa19.48■□□□□ 0.71
FAM228B-207ENST00000611917 PLPPR3Q6T4P5 718 aa19.48■□□□□ 0.71
FAM228B-207ENST00000611917 PTPRMP28827 1452 aa19.46■□□□□ 0.71
FAM228B-207ENST00000611917 MAP3K1Q13233 1512 aa19.45■□□□□ 0.7
FAM228B-207ENST00000611917 NCOA2Q15596 1464 aa19.44■□□□□ 0.7
FAM228B-207ENST00000611917 LRRC9Q6ZRR7 1453 aa19.44■□□□□ 0.7
FAM228B-207ENST00000611917 CDC42BPAQ5VT25 1732 aa19.44■□□□□ 0.7
FAM228B-207ENST00000611917 ABCC1P33527 1531 aa19.44■□□□□ 0.7
FAM228B-207ENST00000611917 KDM5CP41229 1560 aa19.43■□□□□ 0.7
FAM228B-207ENST00000611917 TIAM1Q13009 1591 aa19.42■□□□□ 0.7
FAM228B-207ENST00000611917 ADAMTSL3P82987 1691 aa19.42■□□□□ 0.7
FAM228B-207ENST00000611917 BCORL1Q5H9F3 1711 aa19.41■□□□□ 0.7
FAM228B-207ENST00000611917 SAMD9LQ8IVG5 1584 aa19.39■□□□□ 0.69
FAM228B-207ENST00000611917 HECW2Q9P2P5 1572 aa19.39■□□□□ 0.69
FAM228B-207ENST00000611917 SUPT6HQ7KZ85 1726 aaKnown RBP19.38■□□□□ 0.69
FAM228B-207ENST00000611917 PPP6R1Q9UPN7 881 aa19.38■□□□□ 0.69
FAM228B-207ENST00000611917 SYCP2Q9BX26 1530 aa19.37■□□□□ 0.69
FAM228B-207ENST00000611917 RTEL1-TNFRSF6BF6WH68 1400 aa19.36■□□□□ 0.69
FAM228B-207ENST00000611917 CEBPAP49715 358 aaPredicted RBP19.36■□□□□ 0.69
FAM228B-207ENST00000611917 GGT6Q6P531 493 aa19.36■□□□□ 0.69
FAM228B-207ENST00000611917 MBD5Q9P267 1494 aa19.35■□□□□ 0.69
FAM228B-207ENST00000611917 ITSN2Q9NZM3 1697 aa19.35■□□□□ 0.69
FAM228B-207ENST00000611917 MADDQ8WXG6 1647 aa19.33■□□□□ 0.69
FAM228B-207ENST00000611917 AGLP35573 1532 aa19.33■□□□□ 0.68
FAM228B-207ENST00000611917 MIA2Q96PC5 1412 aa19.33■□□□□ 0.68
FAM228B-207ENST00000611917 DIP2CQ9Y2E4 1556 aa19.32■□□□□ 0.68
FAM228B-207ENST00000611917 REREQ9P2R6 1566 aa19.32■□□□□ 0.68
FAM228B-207ENST00000611917 DHX29Q7Z478 1369 aaKnown RBP19.32■□□□□ 0.68
FAM228B-207ENST00000611917 A2MP01023 1474 aa19.3■□□□□ 0.68
FAM228B-207ENST00000611917 MYOM3Q5VTT5 1437 aa19.3■□□□□ 0.68
FAM228B-207ENST00000611917 KIF3BO15066 747 aa19.29■□□□□ 0.68
FAM228B-207ENST00000611917 KIDINS220Q9ULH0 1771 aa19.29■□□□□ 0.68
FAM228B-207ENST00000611917 CNTLNQ9NXG0 1405 aa19.28■□□□□ 0.68
FAM228B-207ENST00000611917 ATP7AQ04656 1500 aa19.28■□□□□ 0.68
FAM228B-207ENST00000611917 CAMSAP2Q08AD1 1489 aa19.28■□□□□ 0.68
FAM228B-207ENST00000611917 CCDC141Q6ZP82 1450 aa19.28■□□□□ 0.68
FAM228B-207ENST00000611917 RIMS1Q86UR5 1692 aaKnown RBP19.27■□□□□ 0.67
FAM228B-207ENST00000611917 ABCA6Q8N139 1617 aa19.26■□□□□ 0.67
FAM228B-207ENST00000611917 ZMYM3Q14202 1370 aa19.25■□□□□ 0.67
FAM228B-207ENST00000611917 HSPA2P54652 639 aa19.24■□□□□ 0.67
FAM228B-207ENST00000611917 SIGLEC1Q9BZZ2 1709 aa19.24■□□□□ 0.67
FAM228B-207ENST00000611917 WASHC2CQ9Y4E1 1318 aa19.22■□□□□ 0.67
FAM228B-207ENST00000611917 FAM50AQ14320 339 aaKnown RBP19.2■□□□□ 0.66
FAM228B-207ENST00000611917 DMRT2Q9Y5R5 561 aa19.2■□□□□ 0.66
FAM228B-207ENST00000611917 FER1L4A9Z1Z3 1794 aa19.19■□□□□ 0.66
FAM228B-207ENST00000611917 ARHGEF5Q12774 1597 aa19.19■□□□□ 0.66
FAM228B-207ENST00000611917 INO80Q9ULG1 1556 aaPredicted RBP19.18■□□□□ 0.66
FAM228B-207ENST00000611917 RRP7BPQ9NSQ0 103 aa19.17■□□□□ 0.66
FAM228B-207ENST00000611917 CHIC2Q9UKJ5 165 aa19.16■□□□□ 0.66
FAM228B-207ENST00000611917 UHRF1BP1Q6BDS2 1440 aa19.16■□□□□ 0.66
FAM228B-207ENST00000611917 LMTK3Q96Q04 1460 aa19.16■□□□□ 0.66
FAM228B-207ENST00000611917 SETD1BQ9UPS6 1966 aaKnown RBP19.15■□□□□ 0.66
FAM228B-207ENST00000611917 FGD6Q6ZV73 1430 aa19.15■□□□□ 0.66
FAM228B-207ENST00000611917 ADGBQ8N7X0 1667 aa19.14■□□□□ 0.65
FAM228B-207ENST00000611917 PLXNC1O60486 1568 aa19.11■□□□□ 0.65
FAM228B-207ENST00000611917 ABCC5O15440 1437 aa19.11■□□□□ 0.65
FAM228B-207ENST00000611917 NPATQ14207 1427 aa19.11■□□□□ 0.65
FAM228B-207ENST00000611917 PPARGC1BQ86YN6 1023 aaKnown RBP19.11■□□□□ 0.65
FAM228B-207ENST00000611917 ANKRD30AQ9BXX3 1397 aa19.1■□□□□ 0.65
FAM228B-207ENST00000611917 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.08■□□□□ 0.64
FAM228B-207ENST00000611917 TCOF1Q13428 1488 aaKnown RBP19.08■□□□□ 0.64
FAM228B-207ENST00000611917 DAPK1P53355 1430 aa19.08■□□□□ 0.64
FAM228B-207ENST00000611917 PTPN23Q9H3S7 1636 aa19.07■□□□□ 0.64
FAM228B-207ENST00000611917 FBXO31Q5XUX0 539 aaPredicted RBP19.07■□□□□ 0.64
FAM228B-207ENST00000611917 KIF15Q9NS87 1388 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms