RNA–Protein interactions for RNA: ENST00000611412.4

VPS45-212, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 5 BASIC

Gene VPS45, Length 2,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-212ENST00000611412 RRBP1Q9P2E9 1410 aaKnown RBP18.23■□□□□ 0.51
VPS45-212ENST00000611412 PLCH2O75038 1416 aa18.22■□□□□ 0.51
VPS45-212ENST00000611412 TRHP20396 242 aaPredicted RBP18.21■□□□□ 0.51
VPS45-212ENST00000611412 GLI2P10070 1586 aa18.21■□□□□ 0.51
VPS45-212ENST00000611412 KIF13AQ9H1H9 1805 aa18.21■□□□□ 0.51
VPS45-212ENST00000611412 PTPN23Q9H3S7 1636 aa18.21■□□□□ 0.51
VPS45-212ENST00000611412 ITGAEP38570 1179 aa18.2■□□□□ 0.5
VPS45-212ENST00000611412 MIA2Q96PC5 1412 aa18.2■□□□□ 0.5
VPS45-212ENST00000611412 MAP3K4Q9Y6R4 1608 aa18.19■□□□□ 0.5
VPS45-212ENST00000611412 PCGF6Q9BYE7 350 aa18.18■□□□□ 0.5
VPS45-212ENST00000611412 TSPOAP1O95153 1857 aa18.18■□□□□ 0.5
VPS45-212ENST00000611412 CAMSAP2Q08AD1 1489 aa18.18■□□□□ 0.5
VPS45-212ENST00000611412 EFCAB2Q5VUJ9 269 aa18.16■□□□□ 0.5
VPS45-212ENST00000611412 SAMD9LQ8IVG5 1584 aa18.16■□□□□ 0.5
VPS45-212ENST00000611412 FANCAO15360 1455 aa18.15■□□□□ 0.5
VPS45-212ENST00000611412 TCOF1Q13428 1488 aaKnown RBP18.15■□□□□ 0.5
VPS45-212ENST00000611412 HNRNPMP52272 730 aaKnown RBP eCLIP18.14■□□□□ 0.49
VPS45-212ENST00000611412 ARAP3Q8WWN8 1544 aa18.12■□□□□ 0.49
VPS45-212ENST00000611412 PPRC1Q5VV67 1664 aaKnown RBP18.11■□□□□ 0.49
VPS45-212ENST00000611412 SYCP2Q9BX26 1530 aa18.1■□□□□ 0.49
VPS45-212ENST00000611412 ARHGEF12Q9NZN5 1544 aa18.09■□□□□ 0.49
VPS45-212ENST00000611412 AKNAQ7Z591 1439 aa18.09■□□□□ 0.49
VPS45-212ENST00000611412 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.08■□□□□ 0.48
VPS45-212ENST00000611412 ADGRL1O94910 1474 aa18.07■□□□□ 0.48
VPS45-212ENST00000611412 ABCC1P33527 1531 aa18.07■□□□□ 0.48
VPS45-212ENST00000611412 CHIC2Q9UKJ5 165 aa18.07■□□□□ 0.48
VPS45-212ENST00000611412 PTPRKQ15262 1439 aa18.07■□□□□ 0.48
VPS45-212ENST00000611412 SCAPERQ9BY12 1400 aa18.06■□□□□ 0.48
VPS45-212ENST00000611412 MBD5Q9P267 1494 aa18.06■□□□□ 0.48
VPS45-212ENST00000611412 CFAP74Q9C0B2 1584 aa18.06■□□□□ 0.48
VPS45-212ENST00000611412 ABCC5O15440 1437 aa18.05■□□□□ 0.48
VPS45-212ENST00000611412 DAPK1P53355 1430 aa18.05■□□□□ 0.48
VPS45-212ENST00000611412 TRAPPC8Q9Y2L5 1435 aa18.04■□□□□ 0.48
VPS45-212ENST00000611412 PLEKHH2Q8IVE3 1493 aa18.04■□□□□ 0.48
VPS45-212ENST00000611412 NEO1Q92859 1461 aa18.04■□□□□ 0.48
VPS45-212ENST00000611412 DNMT1P26358 1616 aaKnown RBP18.04■□□□□ 0.48
VPS45-212ENST00000611412 TEX14Q8IWB6 1497 aa18.04■□□□□ 0.48
VPS45-212ENST00000611412 AFAP1Q8N556 730 aa18.03■□□□□ 0.48
VPS45-212ENST00000611412 KIAA1107Q9UPP5 1409 aa18.03■□□□□ 0.48
VPS45-212ENST00000611412 CCDC141Q6ZP82 1450 aa18.01■□□□□ 0.47
VPS45-212ENST00000611412 ARHGEF5Q12774 1597 aa18.01■□□□□ 0.47
VPS45-212ENST00000611412 RAPGEF3O95398 923 aa18■□□□□ 0.47
VPS45-212ENST00000611412 CROCC2H7BZ55 1655 aa17.99■□□□□ 0.47
VPS45-212ENST00000611412 TSPY4P0CV99 314 aa17.99■□□□□ 0.47
VPS45-212ENST00000611412 TSPY10P0CW01 314 aa17.99■□□□□ 0.47
VPS45-212ENST00000611412 RRP7BPQ9NSQ0 103 aa17.97■□□□□ 0.47
VPS45-212ENST00000611412 DENND4BO75064 1496 aaPredicted RBP17.97■□□□□ 0.47
VPS45-212ENST00000611412 C9orf84Q5VXU9 1444 aa17.97■□□□□ 0.47
VPS45-212ENST00000611412 MYT1LQ9UL68 1186 aa17.97■□□□□ 0.47
VPS45-212ENST00000611412 POGZQ7Z3K3 1410 aa17.96■□□□□ 0.47
VPS45-212ENST00000611412 RSPH4AQ5TD94 716 aa17.96■□□□□ 0.47
VPS45-212ENST00000611412 COL17A1Q9UMD9 1497 aaPredicted RBP17.95■□□□□ 0.46
VPS45-212ENST00000611412 SPAG9O60271 1321 aaKnown RBP17.95■□□□□ 0.46
VPS45-212ENST00000611412 ZNF518AQ6AHZ1 1483 aa17.94■□□□□ 0.46
VPS45-212ENST00000611412 SHANK2Q9UPX8 1470 aa17.93■□□□□ 0.46
VPS45-212ENST00000611412 RICTORQ6R327 1708 aa17.92■□□□□ 0.46
VPS45-212ENST00000611412 FRMPD1Q5SYB0 1578 aa17.92■□□□□ 0.46
VPS45-212ENST00000611412 ADGBQ8N7X0 1667 aa17.91■□□□□ 0.46
VPS45-212ENST00000611412 NCOA1Q15788 1441 aa17.9■□□□□ 0.46
VPS45-212ENST00000611412 MAST1Q9Y2H9 1570 aa17.89■□□□□ 0.45
VPS45-212ENST00000611412 ANKRD30AQ9BXX3 1397 aa17.89■□□□□ 0.45
VPS45-212ENST00000611412 ZFYVE16Q7Z3T8 1539 aa17.89■□□□□ 0.45
VPS45-212ENST00000611412 KDM5CP41229 1560 aa17.89■□□□□ 0.45
VPS45-212ENST00000611412 ADGRL2O95490 1459 aa17.88■□□□□ 0.45
VPS45-212ENST00000611412 ATP7AQ04656 1500 aa17.88■□□□□ 0.45
VPS45-212ENST00000611412 INO80Q9ULG1 1556 aaPredicted RBP17.88■□□□□ 0.45
VPS45-212ENST00000611412 ROCK1Q13464 1354 aa17.87■□□□□ 0.45
VPS45-212ENST00000611412 NAIPQ13075 1403 aa17.87■□□□□ 0.45
VPS45-212ENST00000611412 KIF15Q9NS87 1388 aa17.86■□□□□ 0.45
VPS45-212ENST00000611412 KIDINS220Q9ULH0 1771 aa17.86■□□□□ 0.45
VPS45-212ENST00000611412 KDM6BO15054 1643 aa17.86■□□□□ 0.45
VPS45-212ENST00000611412 HECW2Q9P2P5 1572 aa17.86■□□□□ 0.45
VPS45-212ENST00000611412 HFM1A2PYH4 1435 aa17.86■□□□□ 0.45
VPS45-212ENST00000611412 SETD5Q9C0A6 1442 aa17.86■□□□□ 0.45
VPS45-212ENST00000611412 RTEL1-TNFRSF6BF6WH68 1400 aa17.85■□□□□ 0.45
VPS45-212ENST00000611412 MLH3Q9UHC1 1453 aa17.84■□□□□ 0.45
VPS45-212ENST00000611412 YEATS2Q9ULM3 1422 aa17.84■□□□□ 0.45
VPS45-212ENST00000611412 RAB3GAP2Q9H2M9 1393 aa17.84■□□□□ 0.45
VPS45-212ENST00000611412 GCC2Q8IWJ2 1684 aa17.83■□□□□ 0.44
VPS45-212ENST00000611412 PLXNC1O60486 1568 aa17.83■□□□□ 0.44
VPS45-212ENST00000611412 ABCA6Q8N139 1617 aa17.81■□□□□ 0.44
VPS45-212ENST00000611412 ZMYM4Q5VZL5 1548 aa17.81■□□□□ 0.44
VPS45-212ENST00000611412 ANKRD50Q9ULJ7 1429 aa17.79■□□□□ 0.44
VPS45-212ENST00000611412 DIP2CQ9Y2E4 1556 aa17.79■□□□□ 0.44
VPS45-212ENST00000611412 DUOX2Q9NRD8 1548 aa17.78■□□□□ 0.44
VPS45-212ENST00000611412 A2MP01023 1474 aa17.76■□□□□ 0.43
VPS45-212ENST00000611412 MAGI2Q86UL8 1455 aa17.76■□□□□ 0.43
VPS45-212ENST00000611412 DHX29Q7Z478 1369 aaKnown RBP17.74■□□□□ 0.43
VPS45-212ENST00000611412 TRIM52Q96A61 297 aa17.74■□□□□ 0.43
VPS45-212ENST00000611412 ARHGEF40Q8TER5 1519 aa17.72■□□□□ 0.43
VPS45-212ENST00000611412 KIF3BO15066 747 aa17.72■□□□□ 0.43
VPS45-212ENST00000611412 ERBINQ96RT1 1412 aa17.72■□□□□ 0.43
VPS45-212ENST00000611412 ATP10AO60312 1499 aa17.72■□□□□ 0.43
VPS45-212ENST00000611412 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.71■□□□□ 0.43
VPS45-212ENST00000611412 SIGLEC1Q9BZZ2 1709 aa17.69■□□□□ 0.42
VPS45-212ENST00000611412 HRCP23327 699 aa17.67■□□□□ 0.42
VPS45-212ENST00000611412 GGT6Q6P531 493 aa17.67■□□□□ 0.42
VPS45-212ENST00000611412 NUP155O75694 1391 aa17.66■□□□□ 0.42
VPS45-212ENST00000611412 EIF2AK4Q9P2K8 1649 aaKnown RBP17.65■□□□□ 0.42
VPS45-212ENST00000611412 MLECQ14165 292 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms