RNA–Protein interactions for RNA: ENST00000610553.1

EWSR1-221, Transcript of EWS RNA binding protein 1, humanhuman

TSL 2

Gene EWSR1, Length 2,300 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-221ENST00000610553 L3MBTL2Q969R5 705 aa23.66■■□□□ 1.38
EWSR1-221ENST00000610553 RPRD2Q5VT52 1461 aaKnown RBP23.65■■□□□ 1.38
EWSR1-221ENST00000610553 TEX14Q8IWB6 1497 aa23.65■■□□□ 1.38
EWSR1-221ENST00000610553 DNMT1P26358 1616 aaKnown RBP23.64■■□□□ 1.38
EWSR1-221ENST00000610553 DAPK1P53355 1430 aa23.64■■□□□ 1.37
EWSR1-221ENST00000610553 CCDC7Q96M83 1385 aa23.63■■□□□ 1.37
EWSR1-221ENST00000610553 ANKRD30BQ9BXX2 1392 aa23.63■■□□□ 1.37
EWSR1-221ENST00000610553 POLR1AO95602 1720 aaPredicted RBP23.61■■□□□ 1.37
EWSR1-221ENST00000610553 C11orf95C9JLR9 678 aaPredicted RBP23.59■■□□□ 1.37
EWSR1-221ENST00000610553 GRIN2AQ12879 1464 aa23.59■■□□□ 1.37
EWSR1-221ENST00000610553 FOXD1Q16676 465 aa23.59■■□□□ 1.37
EWSR1-221ENST00000610553 ABCC5O15440 1437 aa23.58■■□□□ 1.37
EWSR1-221ENST00000610553 PRKRIP1Q9H875 184 aaPredicted RBP23.58■■□□□ 1.37
EWSR1-221ENST00000610553 CCDC184Q52MB2 194 aa23.58■■□□□ 1.36
EWSR1-221ENST00000610553 SPATA31E1Q6ZUB1 1445 aa23.57■■□□□ 1.36
EWSR1-221ENST00000610553 ERICH6BQ5W0A0 696 aa23.56■■□□□ 1.36
EWSR1-221ENST00000610553 KIAA0556O60303 1618 aa23.56■■□□□ 1.36
EWSR1-221ENST00000610553 MAGI1Q96QZ7 1491 aaPredicted RBP23.55■■□□□ 1.36
EWSR1-221ENST00000610553 NBPF8Q3BBV2 869 aa23.54■■□□□ 1.36
EWSR1-221ENST00000610553 IRX6P78412 446 aaPredicted RBP23.54■■□□□ 1.36
EWSR1-221ENST00000610553 NUP153P49790 1475 aaKnown RBP23.53■■□□□ 1.36
EWSR1-221ENST00000610553 ARID3CA6NKF2 412 aa23.53■■□□□ 1.36
EWSR1-221ENST00000610553 DISP1Q96F81 1524 aa23.53■■□□□ 1.36
EWSR1-221ENST00000610553 FBLN2P98095 1184 aa23.52■■□□□ 1.36
EWSR1-221ENST00000610553 SYNJ2O15056 1496 aa23.51■■□□□ 1.35
EWSR1-221ENST00000610553 CHMP7Q8WUX9 453 aaPredicted RBP23.5■■□□□ 1.35
EWSR1-221ENST00000610553 ZBED9Q6R2W3 1325 aa23.49■■□□□ 1.35
EWSR1-221ENST00000610553 RAPGEF6Q8TEU7 1601 aa23.49■■□□□ 1.35
EWSR1-221ENST00000610553 KIAA0586Q9BVV6 1533 aa23.49■■□□□ 1.35
EWSR1-221ENST00000610553 KIF7Q2M1P5 1343 aa23.48■■□□□ 1.35
EWSR1-221ENST00000610553 CDK11AQ9UQ88 783 aaPredicted RBP23.48■■□□□ 1.35
EWSR1-221ENST00000610553 CEP170Q5SW79 1584 aa23.48■■□□□ 1.35
EWSR1-221ENST00000610553 FANCIQ9NVI1 1328 aa23.47■■□□□ 1.35
EWSR1-221ENST00000610553 MRS2Q9HD23 443 aa23.47■■□□□ 1.35
EWSR1-221ENST00000610553 ZNF644Q9H582 1327 aaPredicted RBP23.46■■□□□ 1.35
EWSR1-221ENST00000610553 PZPP20742 1482 aa23.46■■□□□ 1.35
EWSR1-221ENST00000610553 MSH5O43196 834 aa23.45■■□□□ 1.35
EWSR1-221ENST00000610553 SLC4A1APQ9BWU0 796 aaKnown RBP23.45■■□□□ 1.34
EWSR1-221ENST00000610553 MBD5Q9P267 1494 aa23.45■■□□□ 1.34
EWSR1-221ENST00000610553 PPP4R2Q9NY27 417 aa23.44■■□□□ 1.34
EWSR1-221ENST00000610553 FAM9BQ8IZU0 186 aa23.43■■□□□ 1.34
EWSR1-221ENST00000610553 ADGBQ8N7X0 1667 aa23.43■■□□□ 1.34
EWSR1-221ENST00000610553 CAMSAP2Q08AD1 1489 aa23.41■■□□□ 1.34
EWSR1-221ENST00000610553 ITSN2Q9NZM3 1697 aa23.41■■□□□ 1.34
EWSR1-221ENST00000610553 TROQ12816 1431 aaPredicted RBP23.38■■□□□ 1.33
EWSR1-221ENST00000610553 CROCC2H7BZ55 1655 aa23.38■■□□□ 1.33
EWSR1-221ENST00000610553 ADGRL2O95490 1459 aa23.37■■□□□ 1.33
EWSR1-221ENST00000610553 KIF14Q15058 1648 aa23.36■■□□□ 1.33
EWSR1-221ENST00000610553 DHX29Q7Z478 1369 aaKnown RBP23.36■■□□□ 1.33
EWSR1-221ENST00000610553 ADCY10Q96PN6 1610 aa23.36■■□□□ 1.33
EWSR1-221ENST00000610553 NUP160Q12769 1436 aa23.35■■□□□ 1.33
EWSR1-221ENST00000610553 PRG4Q92954 1404 aaPredicted RBP23.35■■□□□ 1.33
EWSR1-221ENST00000610553 KIAA1107Q9UPP5 1409 aa23.35■■□□□ 1.33
EWSR1-221ENST00000610553 BCORL1Q5H9F3 1711 aa23.34■■□□□ 1.33
EWSR1-221ENST00000610553 GPATCH8Q9UKJ3 1502 aaKnown RBP23.33■■□□□ 1.32
EWSR1-221ENST00000610553 KDM5CP41229 1560 aa23.31■■□□□ 1.32
EWSR1-221ENST00000610553 USP47Q96K76 1375 aa23.3■■□□□ 1.32
EWSR1-221ENST00000610553 CFDP1Q9UEE9 299 aaPredicted RBP23.29■■□□□ 1.32
EWSR1-221ENST00000610553 SMG6Q86US8 1419 aaKnown RBP23.28■■□□□ 1.32
EWSR1-221ENST00000610553 B4GALNT3Q6L9W6 998 aa23.26■■□□□ 1.31
EWSR1-221ENST00000610553 PLB1Q6P1J6 1458 aa23.26■■□□□ 1.31
EWSR1-221ENST00000610553 ARID4BQ4LE39 1312 aaPredicted RBP23.26■■□□□ 1.31
EWSR1-221ENST00000610553 JPH4Q96JJ6 628 aa23.24■■□□□ 1.31
EWSR1-221ENST00000610553 UHRF1BP1Q6BDS2 1440 aa23.24■■□□□ 1.31
EWSR1-221ENST00000610553 ANKRD30AQ9BXX3 1397 aa23.23■■□□□ 1.31
EWSR1-221ENST00000610553 CHD1O14646 1710 aa23.23■■□□□ 1.31
EWSR1-221ENST00000610553 RALGAPBQ86X10 1494 aa23.23■■□□□ 1.31
EWSR1-221ENST00000610553 PKD2Q13563 968 aa23.21■■□□□ 1.31
EWSR1-221ENST00000610553 ANKRD50Q9ULJ7 1429 aa23.21■■□□□ 1.31
EWSR1-221ENST00000610553 ARHGEF12Q9NZN5 1544 aa23.19■■□□□ 1.3
EWSR1-221ENST00000610553 SHANK2Q9UPX8 1470 aa23.19■■□□□ 1.3
EWSR1-221ENST00000610553 RNF123Q5XPI4 1314 aa23.19■■□□□ 1.3
EWSR1-221ENST00000610553 CDC42BPAQ5VT25 1732 aa23.19■■□□□ 1.3
EWSR1-221ENST00000610553 BCL11AQ9H165 835 aa23.19■■□□□ 1.3
EWSR1-221ENST00000610553 ROCK2O75116 1388 aaKnown RBP23.18■■□□□ 1.3
EWSR1-221ENST00000610553 NUDCQ9Y266 331 aa23.18■■□□□ 1.3
EWSR1-221ENST00000610553 KDM5DQ9BY66 1539 aa23.17■■□□□ 1.3
EWSR1-221ENST00000610553 CARMIL2Q6F5E8 1435 aa23.16■■□□□ 1.3
EWSR1-221ENST00000610553 ZNF326Q5BKZ1 582 aaKnown RBP23.16■■□□□ 1.3
EWSR1-221ENST00000610553 ZNF777Q9ULD5 760 aaPredicted RBP23.16■■□□□ 1.3
EWSR1-221ENST00000610553 ERICH6Q7L0X2 663 aa23.15■■□□□ 1.3
EWSR1-221ENST00000610553 ABCC10Q5T3U5 1492 aa23.12■■□□□ 1.29
EWSR1-221ENST00000610553 C9orf84Q5VXU9 1444 aa23.12■■□□□ 1.29
EWSR1-221ENST00000610553 PNISRQ8TF01 805 aaKnown RBP23.11■■□□□ 1.29
EWSR1-221ENST00000610553 POLR3GLQ9BT43 218 aa23.11■■□□□ 1.29
EWSR1-221ENST00000610553 NUP155O75694 1391 aa23.1■■□□□ 1.29
EWSR1-221ENST00000610553 E9PCH4 1651 aa23.09■■□□□ 1.29
EWSR1-221ENST00000610553 ABCA8O94911 1581 aa23.08■■□□□ 1.29
EWSR1-221ENST00000610553 KIF15Q9NS87 1388 aa23.08■■□□□ 1.29
EWSR1-221ENST00000610553 PTPRGP23470 1445 aa23.08■■□□□ 1.29
EWSR1-221ENST00000610553 LRPPRCP42704 1394 aaKnown RBP23.07■■□□□ 1.28
EWSR1-221ENST00000610553 CNGB1Q14028 1251 aaPredicted RBP23.07■■□□□ 1.28
EWSR1-221ENST00000610553 CARD11Q9BXL7 1154 aa23.07■■□□□ 1.28
EWSR1-221ENST00000610553 KTN1Q86UP2 1357 aaKnown RBP23.05■■□□□ 1.28
EWSR1-221ENST00000610553 TMC1Q8TDI8 760 aa23.03■■□□□ 1.28
EWSR1-221ENST00000610553 ARHGEF5Q12774 1597 aa23.03■■□□□ 1.28
EWSR1-221ENST00000610553 BRD4O60885 1362 aaPredicted RBP23.03■■□□□ 1.28
EWSR1-221ENST00000610553 ATP10BO94823 1461 aa23.02■■□□□ 1.28
EWSR1-221ENST00000610553 PLEKHD1A6NEE1 506 aa23■■□□□ 1.27
EWSR1-221ENST00000610553 CCDC136Q96JN2 1154 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms