RNA–Protein interactions for RNA: ENST00000609429.5

LINC00635-222, long intergenic non-protein coding RNA 635, human

TSL 5

Gene LINC00635, Length 743 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00635-222	ENST00000609429	GLI2	P10070	1586 aa		14.17	□□□□□ -0.14
LINC00635-222	ENST00000609429	CDK13	Q14004	1512 aa	Known RBP	14.17	□□□□□ -0.14
LINC00635-222	ENST00000609429	ATP1B4	Q9UN42	357 aa	Predicted RBP	14.15	□□□□□ -0.14
LINC00635-222	ENST00000609429	TIAM1	Q13009	1591 aa		14.14	□□□□□ -0.15
LINC00635-222	ENST00000609429	PLEKHD1	A6NEE1	506 aa		14.14	□□□□□ -0.15
LINC00635-222	ENST00000609429	POLA2	Q14181	598 aa		14.14	□□□□□ -0.15
LINC00635-222	ENST00000609429	KIF14	Q15058	1648 aa		14.14	□□□□□ -0.15
LINC00635-222	ENST00000609429	EHBP1L1	Q8N3D4	1523 aa		14.14	□□□□□ -0.15
LINC00635-222	ENST00000609429	KIF13A	Q9H1H9	1805 aa		14.13	□□□□□ -0.15
LINC00635-222	ENST00000609429	TRO	Q12816	1431 aa	Predicted RBP	14.13	□□□□□ -0.15
LINC00635-222	ENST00000609429	ABCA9	Q8IUA7	1624 aa		14.12	□□□□□ -0.15
LINC00635-222	ENST00000609429	MAP3K4	Q9Y6R4	1608 aa		14.1	□□□□□ -0.15
LINC00635-222	ENST00000609429	MTUS2	Q5JR59	1369 aa		14.09	□□□□□ -0.15
LINC00635-222	ENST00000609429	ARID3C	A6NKF2	412 aa		14.07	□□□□□ -0.16
LINC00635-222	ENST00000609429	CFAP74	Q9C0B2	1584 aa		14.07	□□□□□ -0.16
LINC00635-222	ENST00000609429	SUPT6H	Q7KZ85	1726 aa	Known RBP	14.07	□□□□□ -0.16
LINC00635-222	ENST00000609429	TEX14	Q8IWB6	1497 aa		14.06	□□□□□ -0.16
LINC00635-222	ENST00000609429	ARAP3	Q8WWN8	1544 aa		14.06	□□□□□ -0.16
LINC00635-222	ENST00000609429	MYO5C	Q9NQX4	1742 aa		14.05	□□□□□ -0.16
LINC00635-222	ENST00000609429	FAM69C	Q0P6D2	419 aa		14.05	□□□□□ -0.16
LINC00635-222	ENST00000609429	LRRC9	Q6ZRR7	1453 aa		14.05	□□□□□ -0.16
LINC00635-222	ENST00000609429	MAGI3	Q5TCQ9	1506 aa		14.05	□□□□□ -0.16
LINC00635-222	ENST00000609429	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	14.04	□□□□□ -0.16
LINC00635-222	ENST00000609429	ITSN2	Q9NZM3	1697 aa		14.04	□□□□□ -0.16
LINC00635-222	ENST00000609429	MYCN	P04198	464 aa	Predicted RBP	14.03	□□□□□ -0.16
LINC00635-222	ENST00000609429	TTC37	Q6PGP7	1564 aa		14.03	□□□□□ -0.16
LINC00635-222	ENST00000609429	CD109	Q6YHK3	1445 aa		14.02	□□□□□ -0.16
LINC00635-222	ENST00000609429	SP7	Q8TDD2	431 aa	Predicted RBP	14.02	□□□□□ -0.17
LINC00635-222	ENST00000609429	PHLDB1	Q86UU1	1377 aa		14.01	□□□□□ -0.17
LINC00635-222	ENST00000609429	KCNH8	Q96L42	1107 aa		14.01	□□□□□ -0.17
LINC00635-222	ENST00000609429	PREX2	Q70Z35	1606 aa		14.01	□□□□□ -0.17
LINC00635-222	ENST00000609429	PPRC1	Q5VV67	1664 aa	Known RBP	13.99	□□□□□ -0.17
LINC00635-222	ENST00000609429	NEO1	Q92859	1461 aa		13.99	□□□□□ -0.17
LINC00635-222	ENST00000609429	PLCH2	O75038	1416 aa		13.98	□□□□□ -0.17
LINC00635-222	ENST00000609429	CDC42BPA	Q5VT25	1732 aa		13.97	□□□□□ -0.17
LINC00635-222	ENST00000609429	NCOA2	Q15596	1464 aa		13.97	□□□□□ -0.17
LINC00635-222	ENST00000609429	TSPOAP1	O95153	1857 aa		13.97	□□□□□ -0.17
LINC00635-222	ENST00000609429	CCNB3	Q8WWL7	1395 aa		13.96	□□□□□ -0.18
LINC00635-222	ENST00000609429	ARHGAP5	Q13017	1502 aa		13.95	□□□□□ -0.18
LINC00635-222	ENST00000609429	FANCA	O15360	1455 aa		13.94	□□□□□ -0.18
LINC00635-222	ENST00000609429	CDC42BPB	Q9Y5S2	1711 aa		13.93	□□□□□ -0.18
LINC00635-222	ENST00000609429	AKT1S1	Q96B36	256 aa		13.93	□□□□□ -0.18
LINC00635-222	ENST00000609429	PLEKHH2	Q8IVE3	1493 aa		13.93	□□□□□ -0.18
LINC00635-222	ENST00000609429	GPATCH8	Q9UKJ3	1502 aa	Known RBP	13.92	□□□□□ -0.18
LINC00635-222	ENST00000609429	KDM6B	O15054	1643 aa		13.91	□□□□□ -0.18
LINC00635-222	ENST00000609429	EFCAB2	Q5VUJ9	269 aa		13.91	□□□□□ -0.18
LINC00635-222	ENST00000609429	MIA2	Q96PC5	1412 aa		13.9	□□□□□ -0.18
LINC00635-222	ENST00000609429	MYOM3	Q5VTT5	1437 aa		13.9	□□□□□ -0.19
LINC00635-222	ENST00000609429	KANK4	Q5T7N3	995 aa	Predicted RBP	13.88	□□□□□ -0.19
LINC00635-222	ENST00000609429	ABCC1	P33527	1531 aa		13.88	□□□□□ -0.19
LINC00635-222	ENST00000609429	AKNA	Q7Z591	1439 aa		13.88	□□□□□ -0.19
LINC00635-222	ENST00000609429	ADGRL1	O94910	1474 aa		13.87	□□□□□ -0.19
LINC00635-222	ENST00000609429	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.86	□□□□□ -0.19
LINC00635-222	ENST00000609429	KIAA1107	Q9UPP5	1409 aa		13.86	□□□□□ -0.19
LINC00635-222	ENST00000609429	SAMD9L	Q8IVG5	1584 aa		13.85	□□□□□ -0.19
LINC00635-222	ENST00000609429	PIP4P2	Q8N4L2	257 aa		13.85	□□□□□ -0.19
LINC00635-222	ENST00000609429	DENND4B	O75064	1496 aa	Predicted RBP	13.85	□□□□□ -0.19
LINC00635-222	ENST00000609429	ZNF518A	Q6AHZ1	1483 aa		13.85	□□□□□ -0.19
LINC00635-222	ENST00000609429	RICTOR	Q6R327	1708 aa		13.84	□□□□□ -0.19
LINC00635-222	ENST00000609429	FGD6	Q6ZV73	1430 aa		13.83	□□□□□ -0.2
LINC00635-222	ENST00000609429	CAMSAP2	Q08AD1	1489 aa		13.83	□□□□□ -0.2
LINC00635-222	ENST00000609429	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.83	□□□□□ -0.2
LINC00635-222	ENST00000609429	ZMYM4	Q5VZL5	1548 aa		13.83	□□□□□ -0.2
LINC00635-222	ENST00000609429	POGZ	Q7Z3K3	1410 aa		13.82	□□□□□ -0.2
LINC00635-222	ENST00000609429	REM2	Q8IYK8	340 aa	Predicted RBP	13.82	□□□□□ -0.2
LINC00635-222	ENST00000609429	ARHGEF5	Q12774	1597 aa		13.82	□□□□□ -0.2
LINC00635-222	ENST00000609429	PTPN23	Q9H3S7	1636 aa		13.82	□□□□□ -0.2
LINC00635-222	ENST00000609429	TCOF1	Q13428	1488 aa	Known RBP	13.81	□□□□□ -0.2
LINC00635-222	ENST00000609429	SYCP2	Q9BX26	1530 aa		13.81	□□□□□ -0.2
LINC00635-222	ENST00000609429	KDM5C	P41229	1560 aa		13.81	□□□□□ -0.2
LINC00635-222	ENST00000609429	SCAPER	Q9BY12	1400 aa		13.81	□□□□□ -0.2
LINC00635-222	ENST00000609429	MAGI2	Q86UL8	1455 aa		13.8	□□□□□ -0.2
LINC00635-222	ENST00000609429	RSPH4A	Q5TD94	716 aa		13.8	□□□□□ -0.2
LINC00635-222	ENST00000609429	FRMPD1	Q5SYB0	1578 aa		13.79	□□□□□ -0.2
LINC00635-222	ENST00000609429	CCDC141	Q6ZP82	1450 aa		13.79	□□□□□ -0.2
LINC00635-222	ENST00000609429	HECW2	Q9P2P5	1572 aa		13.79	□□□□□ -0.2
LINC00635-222	ENST00000609429	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
LINC00635-222	ENST00000609429	ARHGEF40	Q8TER5	1519 aa		13.76	□□□□□ -0.21
LINC00635-222	ENST00000609429	SHANK2	Q9UPX8	1470 aa		13.76	□□□□□ -0.21
LINC00635-222	ENST00000609429	ZNF777	Q9ULD5	760 aa	Predicted RBP	13.76	□□□□□ -0.21
LINC00635-222	ENST00000609429	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.76	□□□□□ -0.21
LINC00635-222	ENST00000609429	CROCC2	H7BZ55	1655 aa		13.75	□□□□□ -0.21
LINC00635-222	ENST00000609429	DNMT1	P26358	1616 aa	Known RBP	13.75	□□□□□ -0.21
LINC00635-222	ENST00000609429	MBD5	Q9P267	1494 aa		13.75	□□□□□ -0.21
LINC00635-222	ENST00000609429	MLH3	Q9UHC1	1453 aa		13.75	□□□□□ -0.21
LINC00635-222	ENST00000609429	INO80	Q9ULG1	1556 aa	Predicted RBP	13.75	□□□□□ -0.21
LINC00635-222	ENST00000609429	MAST1	Q9Y2H9	1570 aa		13.75	□□□□□ -0.21
LINC00635-222	ENST00000609429	COL17A1	Q9UMD9	1497 aa	Predicted RBP	13.74	□□□□□ -0.21
LINC00635-222	ENST00000609429	RRBP1	Q9P2E9	1410 aa	Known RBP	13.74	□□□□□ -0.21
LINC00635-222	ENST00000609429	ZFYVE16	Q7Z3T8	1539 aa		13.74	□□□□□ -0.21
LINC00635-222	ENST00000609429	ARHGEF12	Q9NZN5	1544 aa		13.74	□□□□□ -0.21
LINC00635-222	ENST00000609429	RTEL1-TNFRSF6B	F6WH68	1400 aa		13.73	□□□□□ -0.21
LINC00635-222	ENST00000609429	ATP7A	Q04656	1500 aa		13.72	□□□□□ -0.21
LINC00635-222	ENST00000609429	TRAPPC8	Q9Y2L5	1435 aa		13.72	□□□□□ -0.21
LINC00635-222	ENST00000609429	RERE	Q9P2R6	1566 aa		13.71	□□□□□ -0.21
LINC00635-222	ENST00000609429	PLXNC1	O60486	1568 aa		13.71	□□□□□ -0.22
LINC00635-222	ENST00000609429	ADGB	Q8N7X0	1667 aa		13.7	□□□□□ -0.22
LINC00635-222	ENST00000609429	SPAG9	O60271	1321 aa	Known RBP	13.69	□□□□□ -0.22
LINC00635-222	ENST00000609429	KIDINS220	Q9ULH0	1771 aa		13.69	□□□□□ -0.22
LINC00635-222	ENST00000609429	PITPNM1	O00562	1244 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms