RNA–Protein interactions for RNA: ENST00000609203.1

CLCN3P1-202, Transcript of chloride voltage-gated channel 3 pseudogene 1, humanhuman

TSL 2 BASIC

Gene CLCN3P1, Length 1,944 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P1-202ENST00000609203 CDK13Q14004 1512 aaKnown RBP12.08□□□□□ -0.48
CLCN3P1-202ENST00000609203 UACAQ9BZF9 1416 aa12.08□□□□□ -0.48
CLCN3P1-202ENST00000609203 HECW1Q76N89 1606 aa12.08□□□□□ -0.48
CLCN3P1-202ENST00000609203 C14orf37Q86TY3 774 aa12.07□□□□□ -0.48
CLCN3P1-202ENST00000609203 TMEM132AQ24JP5 1023 aa12.07□□□□□ -0.48
CLCN3P1-202ENST00000609203 ABCC2Q92887 1545 aa12.07□□□□□ -0.48
CLCN3P1-202ENST00000609203 MAGI3Q5TCQ9 1506 aa12.06□□□□□ -0.48
CLCN3P1-202ENST00000609203 HAP1P54257 671 aaPredicted RBP12.05□□□□□ -0.48
CLCN3P1-202ENST00000609203 ATP10BO94823 1461 aa12.05□□□□□ -0.48
CLCN3P1-202ENST00000609203 EPRSP07814 1512 aaKnown RBP12.05□□□□□ -0.48
CLCN3P1-202ENST00000609203 CCDC18Q5T9S5 1454 aa12.04□□□□□ -0.48
CLCN3P1-202ENST00000609203 SUPT6HQ7KZ85 1726 aaKnown RBP12.04□□□□□ -0.48
CLCN3P1-202ENST00000609203 SLC4A1APQ9BWU0 796 aaKnown RBP12.03□□□□□ -0.48
CLCN3P1-202ENST00000609203 UHRF1BP1LA0JNW5 1464 aa12.03□□□□□ -0.48
CLCN3P1-202ENST00000609203 MTUS2Q5JR59 1369 aa12.03□□□□□ -0.48
CLCN3P1-202ENST00000609203 PHLDB1Q86UU1 1377 aa12.03□□□□□ -0.48
CLCN3P1-202ENST00000609203 EHBP1L1Q8N3D4 1523 aa12.03□□□□□ -0.48
CLCN3P1-202ENST00000609203 ZCCHC11Q5TAX3 1644 aaKnown RBP12.03□□□□□ -0.48
CLCN3P1-202ENST00000609203 KDM5BQ9UGL1 1544 aa12.02□□□□□ -0.48
CLCN3P1-202ENST00000609203 ITGAEP38570 1179 aa12□□□□□ -0.49
CLCN3P1-202ENST00000609203 FAM50AQ14320 339 aaKnown RBP11.98□□□□□ -0.49
CLCN3P1-202ENST00000609203 NCOA2Q15596 1464 aa11.96□□□□□ -0.49
CLCN3P1-202ENST00000609203 NPM3O75607 178 aaKnown RBP11.96□□□□□ -0.5
CLCN3P1-202ENST00000609203 KIF14Q15058 1648 aa11.95□□□□□ -0.5
CLCN3P1-202ENST00000609203 FGD6Q6ZV73 1430 aa11.95□□□□□ -0.5
CLCN3P1-202ENST00000609203 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.93□□□□□ -0.5
CLCN3P1-202ENST00000609203 MYOM3Q5VTT5 1437 aa11.93□□□□□ -0.5
CLCN3P1-202ENST00000609203 ASXL2Q76L83 1435 aa11.93□□□□□ -0.5
CLCN3P1-202ENST00000609203 DHX57Q6P158 1386 aaKnown RBP11.93□□□□□ -0.5
CLCN3P1-202ENST00000609203 PTPN23Q9H3S7 1636 aa11.92□□□□□ -0.5
CLCN3P1-202ENST00000609203 RNF216Q9NWF9 866 aaPredicted RBP11.92□□□□□ -0.5
CLCN3P1-202ENST00000609203 CLSPNQ9HAW4 1339 aa11.91□□□□□ -0.5
CLCN3P1-202ENST00000609203 RAB3GAP2Q9H2M9 1393 aa11.9□□□□□ -0.5
CLCN3P1-202ENST00000609203 SETD5Q9C0A6 1442 aa11.9□□□□□ -0.5
CLCN3P1-202ENST00000609203 MAPKBP1O60336 1514 aa11.89□□□□□ -0.51
CLCN3P1-202ENST00000609203 TROQ12816 1431 aaPredicted RBP11.89□□□□□ -0.51
CLCN3P1-202ENST00000609203 WDR7Q9Y4E6 1490 aa11.89□□□□□ -0.51
CLCN3P1-202ENST00000609203 TTC37Q6PGP7 1564 aa11.89□□□□□ -0.51
CLCN3P1-202ENST00000609203 KCNH8Q96L42 1107 aa11.88□□□□□ -0.51
CLCN3P1-202ENST00000609203 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.88□□□□□ -0.51
CLCN3P1-202ENST00000609203 HOXD11P31277 338 aaPredicted RBP11.87□□□□□ -0.51
CLCN3P1-202ENST00000609203 POTEDQ86YR6 584 aa11.87□□□□□ -0.51
CLCN3P1-202ENST00000609203 ABCC10Q5T3U5 1492 aa11.87□□□□□ -0.51
CLCN3P1-202ENST00000609203 PLEKHD1A6NEE1 506 aa11.86□□□□□ -0.51
CLCN3P1-202ENST00000609203 PDIA4P13667 645 aaKnown RBP11.86□□□□□ -0.51
CLCN3P1-202ENST00000609203 KIF13AQ9H1H9 1805 aa11.86□□□□□ -0.51
CLCN3P1-202ENST00000609203 CDK11AQ9UQ88 783 aaPredicted RBP11.85□□□□□ -0.51
CLCN3P1-202ENST00000609203 DIP2BQ9P265 1576 aa11.84□□□□□ -0.51
CLCN3P1-202ENST00000609203 ITSN2Q9NZM3 1697 aa11.84□□□□□ -0.51
CLCN3P1-202ENST00000609203 NPM1P06748 294 aaKnown RBP eCLIP11.84□□□□□ -0.51
CLCN3P1-202ENST00000609203 TCOF1Q13428 1488 aaKnown RBP11.84□□□□□ -0.51
CLCN3P1-202ENST00000609203 CDC42BPAQ5VT25 1732 aa11.84□□□□□ -0.51
CLCN3P1-202ENST00000609203 MIA2Q96PC5 1412 aa11.83□□□□□ -0.52
CLCN3P1-202ENST00000609203 VSIG10Q8N0Z9 540 aa11.82□□□□□ -0.52
CLCN3P1-202ENST00000609203 CDC42BPBQ9Y5S2 1711 aa11.82□□□□□ -0.52
CLCN3P1-202ENST00000609203 GCC2Q8IWJ2 1684 aa11.82□□□□□ -0.52
CLCN3P1-202ENST00000609203 ABCA9Q8IUA7 1624 aa11.82□□□□□ -0.52
CLCN3P1-202ENST00000609203 GPATCH8Q9UKJ3 1502 aaKnown RBP11.82□□□□□ -0.52
CLCN3P1-202ENST00000609203 ZNF644Q9H582 1327 aaPredicted RBP11.8□□□□□ -0.52
CLCN3P1-202ENST00000609203 HFM1A2PYH4 1435 aa11.79□□□□□ -0.52
CLCN3P1-202ENST00000609203 PPRC1Q5VV67 1664 aaKnown RBP11.79□□□□□ -0.52
CLCN3P1-202ENST00000609203 MAP3K4Q9Y6R4 1608 aa11.79□□□□□ -0.52
CLCN3P1-202ENST00000609203 PTPRKQ15262 1439 aa11.79□□□□□ -0.52
CLCN3P1-202ENST00000609203 ZNF316A6NFI3 1004 aaPredicted RBP11.78□□□□□ -0.52
CLCN3P1-202ENST00000609203 FAM69CQ0P6D2 419 aa11.78□□□□□ -0.52
CLCN3P1-202ENST00000609203 UBE2Q2Q8WVN8 375 aa11.78□□□□□ -0.52
CLCN3P1-202ENST00000609203 PREX2Q70Z35 1606 aa11.78□□□□□ -0.52
CLCN3P1-202ENST00000609203 GLI2P10070 1586 aa11.77□□□□□ -0.52
CLCN3P1-202ENST00000609203 TSPOAP1O95153 1857 aa11.77□□□□□ -0.53
CLCN3P1-202ENST00000609203 DNMT1P26358 1616 aaKnown RBP11.77□□□□□ -0.53
CLCN3P1-202ENST00000609203 MYO5CQ9NQX4 1742 aa11.76□□□□□ -0.53
CLCN3P1-202ENST00000609203 PLCH2O75038 1416 aa11.75□□□□□ -0.53
CLCN3P1-202ENST00000609203 NAIPQ13075 1403 aa11.75□□□□□ -0.53
CLCN3P1-202ENST00000609203 SAMD9LQ8IVG5 1584 aa11.75□□□□□ -0.53
CLCN3P1-202ENST00000609203 CD109Q6YHK3 1445 aa11.75□□□□□ -0.53
CLCN3P1-202ENST00000609203 AKNAQ7Z591 1439 aa11.74□□□□□ -0.53
CLCN3P1-202ENST00000609203 ARHGEF12Q9NZN5 1544 aa11.74□□□□□ -0.53
CLCN3P1-202ENST00000609203 ADGBQ8N7X0 1667 aa11.74□□□□□ -0.53
CLCN3P1-202ENST00000609203 DIEXFQ68CQ4 756 aaKnown RBP11.74□□□□□ -0.53
CLCN3P1-202ENST00000609203 CROCC2H7BZ55 1655 aa11.73□□□□□ -0.53
CLCN3P1-202ENST00000609203 CAMSAP2Q08AD1 1489 aa11.73□□□□□ -0.53
CLCN3P1-202ENST00000609203 CHIC2Q9UKJ5 165 aa11.72□□□□□ -0.53
CLCN3P1-202ENST00000609203 DAPK1P53355 1430 aa11.72□□□□□ -0.53
CLCN3P1-202ENST00000609203 ARHGAP5Q13017 1502 aa11.72□□□□□ -0.53
CLCN3P1-202ENST00000609203 CHMP4AQ9BY43 222 aa11.71□□□□□ -0.53
CLCN3P1-202ENST00000609203 RRP7BPQ9NSQ0 103 aa11.71□□□□□ -0.53
CLCN3P1-202ENST00000609203 CFDP1Q9UEE9 299 aaPredicted RBP11.71□□□□□ -0.53
CLCN3P1-202ENST00000609203 ZNF777Q9ULD5 760 aaPredicted RBP11.7□□□□□ -0.54
CLCN3P1-202ENST00000609203 FANCAO15360 1455 aa11.7□□□□□ -0.54
CLCN3P1-202ENST00000609203 COL17A1Q9UMD9 1497 aaPredicted RBP11.7□□□□□ -0.54
CLCN3P1-202ENST00000609203 TRHP20396 242 aaPredicted RBP11.7□□□□□ -0.54
CLCN3P1-202ENST00000609203 MBD5Q9P267 1494 aa11.69□□□□□ -0.54
CLCN3P1-202ENST00000609203 ARAP3Q8WWN8 1544 aa11.69□□□□□ -0.54
CLCN3P1-202ENST00000609203 SYCP2Q9BX26 1530 aa11.68□□□□□ -0.54
CLCN3P1-202ENST00000609203 KDM6BO15054 1643 aa11.68□□□□□ -0.54
CLCN3P1-202ENST00000609203 ABCC5O15440 1437 aa11.68□□□□□ -0.54
CLCN3P1-202ENST00000609203 ABCC1P33527 1531 aa11.68□□□□□ -0.54
CLCN3P1-202ENST00000609203 HNRNPMP52272 730 aaKnown RBP eCLIP11.68□□□□□ -0.54
CLCN3P1-202ENST00000609203 ROCK1Q13464 1354 aa11.68□□□□□ -0.54
CLCN3P1-202ENST00000609203 NEUROD1Q13562 356 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms