RNA–Protein interactions for RNA: ENST00000608853.5

ATXN2-226, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATXN2, Length 4,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-226ENST00000608853 CASC1Q6TDU7 716 aa15.83■□□□□ 0.12
ATXN2-226ENST00000608853 PNNQ9H307 717 aaKnown RBP15.83■□□□□ 0.12
ATXN2-226ENST00000608853 ESF1Q9H501 851 aaKnown RBP15.83■□□□□ 0.12
ATXN2-226ENST00000608853 NPM1P06748 294 aaKnown RBP eCLIP15.81■□□□□ 0.12
ATXN2-226ENST00000608853 SENP3Q9H4L4 574 aaPredicted RBP15.8■□□□□ 0.12
ATXN2-226ENST00000608853 GZF1Q9H116 711 aaPredicted RBP15.8■□□□□ 0.12
ATXN2-226ENST00000608853 CHMP4BQ9H444 224 aaKnown RBP15.79■□□□□ 0.12
ATXN2-226ENST00000608853 FHOD3Q2V2M9 1422 aa15.78■□□□□ 0.12
ATXN2-226ENST00000608853 ROCK2O75116 1388 aaKnown RBP15.77■□□□□ 0.12
ATXN2-226ENST00000608853 U2SURPO15042 1029 aaKnown RBP15.77■□□□□ 0.12
ATXN2-226ENST00000608853 MSNP26038 577 aaKnown RBP15.77■□□□□ 0.12
ATXN2-226ENST00000608853 EXOC6Q8TAG9 804 aa15.77■□□□□ 0.11
ATXN2-226ENST00000608853 GSE1Q14687 1217 aa15.76■□□□□ 0.11
ATXN2-226ENST00000608853 EIF4G1Q04637 1599 aaKnown RBP15.76■□□□□ 0.11
ATXN2-226ENST00000608853 TPRNQ4KMQ1 711 aa15.75■□□□□ 0.11
ATXN2-226ENST00000608853 RRP1P56182 461 aaKnown RBP15.75■□□□□ 0.11
ATXN2-226ENST00000608853 GOLGA2Q08379 1002 aa15.75■□□□□ 0.11
ATXN2-226ENST00000608853 ARID4BQ4LE39 1312 aaPredicted RBP15.75■□□□□ 0.11
ATXN2-226ENST00000608853 NUP155O75694 1391 aa15.74■□□□□ 0.11
ATXN2-226ENST00000608853 GOLGA6L3A6NEY3 463 aa15.74■□□□□ 0.11
ATXN2-226ENST00000608853 SLC4A3P48751 1232 aa15.73■□□□□ 0.11
ATXN2-226ENST00000608853 PLCB2Q00722 1185 aa15.73■□□□□ 0.11
ATXN2-226ENST00000608853 RWDD1Q9H446 243 aaPredicted RBP15.73■□□□□ 0.11
ATXN2-226ENST00000608853 MYBBP1AQ9BQG0 1328 aaKnown RBP15.73■□□□□ 0.11
ATXN2-226ENST00000608853 MORC1Q86VD1 984 aa15.73■□□□□ 0.11
ATXN2-226ENST00000608853 GBP4Q96PP9 640 aa15.73■□□□□ 0.11
ATXN2-226ENST00000608853 KIF15Q9NS87 1388 aa15.72■□□□□ 0.11
ATXN2-226ENST00000608853 SMARCA2P51531 1590 aa15.72■□□□□ 0.11
ATXN2-226ENST00000608853 CCDC18Q5T9S5 1454 aa15.71■□□□□ 0.11
ATXN2-226ENST00000608853 PLIN1O60240 522 aa15.7■□□□□ 0.1
ATXN2-226ENST00000608853 FAM161AQ3B820 660 aa15.7■□□□□ 0.1
ATXN2-226ENST00000608853 CENPQQ7L2Z9 268 aaPredicted RBP15.7■□□□□ 0.1
ATXN2-226ENST00000608853 ST20-MTHFSA0A0A6YYL1 179 aa15.69■□□□□ 0.1
ATXN2-226ENST00000608853 PMFBP1Q8TBY8 1022 aa15.69■□□□□ 0.1
ATXN2-226ENST00000608853 PHLDB1Q86UU1 1377 aa15.68■□□□□ 0.1
ATXN2-226ENST00000608853 ANKRD30AQ9BXX3 1397 aa15.68■□□□□ 0.1
ATXN2-226ENST00000608853 KIF21BO75037 1637 aa15.67■□□□□ 0.1
ATXN2-226ENST00000608853 RSPH6AQ9H0K4 717 aa15.67■□□□□ 0.1
ATXN2-226ENST00000608853 MFAP1P55081 439 aaKnown RBP15.66■□□□□ 0.1
ATXN2-226ENST00000608853 CRBNQ96SW2 442 aa15.66■□□□□ 0.1
ATXN2-226ENST00000608853 PTMSP20962 102 aa15.66■□□□□ 0.1
ATXN2-226ENST00000608853 TDRD9Q8NDG6 1382 aaKnown RBP15.65■□□□□ 0.1
ATXN2-226ENST00000608853 IPO8O15397 1037 aaKnown RBP15.65■□□□□ 0.1
ATXN2-226ENST00000608853 CCDC7Q96M83 1385 aa15.64■□□□□ 0.09
ATXN2-226ENST00000608853 USP47Q96K76 1375 aa15.64■□□□□ 0.09
ATXN2-226ENST00000608853 CLUAP1Q96AJ1 413 aa15.64■□□□□ 0.09
ATXN2-226ENST00000608853 ZRSR1Q15695 479 aaKnown RBP15.63■□□□□ 0.09
ATXN2-226ENST00000608853 CCDC146Q8IYE0 955 aa15.63■□□□□ 0.09
ATXN2-226ENST00000608853 POGKQ9P215 609 aa15.63■□□□□ 0.09
ATXN2-226ENST00000608853 CENPJQ9HC77 1338 aaPredicted RBP15.63■□□□□ 0.09
ATXN2-226ENST00000608853 SMARCA4P51532 1647 aa15.63■□□□□ 0.09
ATXN2-226ENST00000608853 CFAP44Q96MT7 982 aa15.63■□□□□ 0.09
ATXN2-226ENST00000608853 U2AF1L5P0DN76 240 aaPredicted RBP15.62■□□□□ 0.09
ATXN2-226ENST00000608853 U2AF1Q01081 240 aaKnown RBP eCLIP15.62■□□□□ 0.09
ATXN2-226ENST00000608853 ITPRIPQ8IWB1 547 aa15.62■□□□□ 0.09
ATXN2-226ENST00000608853 WASHC2AQ641Q2 1341 aa15.62■□□□□ 0.09
ATXN2-226ENST00000608853 CHAF1AQ13111 956 aaPredicted RBP15.61■□□□□ 0.09
ATXN2-226ENST00000608853 KIF7Q2M1P5 1343 aa15.61■□□□□ 0.09
ATXN2-226ENST00000608853 CNTLNQ9NXG0 1405 aa15.61■□□□□ 0.09
ATXN2-226ENST00000608853 UACAQ9BZF9 1416 aa15.59■□□□□ 0.09
ATXN2-226ENST00000608853 PANK3Q9H999 370 aa15.59■□□□□ 0.09
ATXN2-226ENST00000608853 PAK3O75914 559 aaPredicted RBP15.59■□□□□ 0.09
ATXN2-226ENST00000608853 RRBP1Q9P2E9 1410 aaKnown RBP15.59■□□□□ 0.09
ATXN2-226ENST00000608853 ATAD2BQ9ULI0 1458 aa15.58■□□□□ 0.08
ATXN2-226ENST00000608853 HSP90AA2PQ14568 343 aaPredicted RBP15.58■□□□□ 0.08
ATXN2-226ENST00000608853 PLPPR3Q6T4P5 718 aa15.57■□□□□ 0.08
ATXN2-226ENST00000608853 SMC4Q9NTJ3 1288 aa15.57■□□□□ 0.08
ATXN2-226ENST00000608853 MCCP23508 829 aa15.57■□□□□ 0.08
ATXN2-226ENST00000608853 NFKBIBQ15653 356 aa15.56■□□□□ 0.08
ATXN2-226ENST00000608853 SRPK2P78362 688 aaKnown RBP15.56■□□□□ 0.08
ATXN2-226ENST00000608853 KANK1Q14678 1352 aa15.56■□□□□ 0.08
ATXN2-226ENST00000608853 FGD6Q6ZV73 1430 aa15.55■□□□□ 0.08
ATXN2-226ENST00000608853 CGNL1Q0VF96 1302 aa15.55■□□□□ 0.08
ATXN2-226ENST00000608853 GOLGA6L4A6NEF3 574 aa15.54■□□□□ 0.08
ATXN2-226ENST00000608853 DDX11L8A8MPP1 907 aa15.54■□□□□ 0.08
ATXN2-226ENST00000608853 APBB1O00213 710 aa15.54■□□□□ 0.08
ATXN2-226ENST00000608853 CALD1Q05682 793 aaKnown RBP15.54■□□□□ 0.08
ATXN2-226ENST00000608853 ARID3AQ99856 593 aa15.54■□□□□ 0.08
ATXN2-226ENST00000608853 KIAA2012Q0VF49 1180 aa15.54■□□□□ 0.08
ATXN2-226ENST00000608853 HAP1P54257 671 aaPredicted RBP15.53■□□□□ 0.08
ATXN2-226ENST00000608853 SAFB2Q14151 953 aaKnown RBP eCLIP15.53■□□□□ 0.08
ATXN2-226ENST00000608853 LRRC9Q6ZRR7 1453 aa15.53■□□□□ 0.08
ATXN2-226ENST00000608853 KCNJ4P48050 445 aa15.53■□□□□ 0.08
ATXN2-226ENST00000608853 C14orf37Q86TY3 774 aa15.52■□□□□ 0.08
ATXN2-226ENST00000608853 ZBTB7CA1YPR0 619 aa15.52■□□□□ 0.07
ATXN2-226ENST00000608853 IGF1RP08069 1367 aa15.52■□□□□ 0.07
ATXN2-226ENST00000608853 CADPSQ9ULU8 1353 aa15.52■□□□□ 0.07
ATXN2-226ENST00000608853 FOXD4L1Q9NU39 408 aa15.52■□□□□ 0.07
ATXN2-226ENST00000608853 COG6Q9Y2V7 657 aa15.52■□□□□ 0.07
ATXN2-226ENST00000608853 E9PSI1 815 aa15.51■□□□□ 0.07
ATXN2-226ENST00000608853 CDK11BP21127 795 aaKnown RBP15.51■□□□□ 0.07
ATXN2-226ENST00000608853 ARAP1Q96P48 1450 aa15.51■□□□□ 0.07
ATXN2-226ENST00000608853 OS9Q13438 667 aaPredicted RBP15.5■□□□□ 0.07
ATXN2-226ENST00000608853 MSH5O43196 834 aa15.5■□□□□ 0.07
ATXN2-226ENST00000608853 HNRNPMP52272 730 aaKnown RBP eCLIP15.5■□□□□ 0.071e-6■■□□□ 14.5
ATXN2-226ENST00000608853 NRDCO43847 1150 aa15.5■□□□□ 0.07
ATXN2-226ENST00000608853 VSIG10Q8N0Z9 540 aa15.5■□□□□ 0.07
ATXN2-226ENST00000608853 IL27Q8NEV9 243 aa15.5■□□□□ 0.07
ATXN2-226ENST00000608853 BCL2L13Q9BXK5 485 aa15.5■□□□□ 0.07
ATXN2-226ENST00000608853 EIF3AQ14152 1382 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms