RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 TROQ12816 1431 aaPredicted RBP21.9■■□□□ 1.1
POLR2J3-219ENST00000608621 POGZQ7Z3K3 1410 aa21.9■■□□□ 1.1
POLR2J3-219ENST00000608621 MLECQ14165 292 aa21.9■■□□□ 1.1
POLR2J3-219ENST00000608621 PLPPR3Q6T4P5 718 aa21.89■■□□□ 1.09
POLR2J3-219ENST00000608621 KIF14Q15058 1648 aa21.88■■□□□ 1.09
POLR2J3-219ENST00000608621 MYO5CQ9NQX4 1742 aa21.88■■□□□ 1.09
POLR2J3-219ENST00000608621 RIMS1Q86UR5 1692 aaKnown RBP21.88■■□□□ 1.09
POLR2J3-219ENST00000608621 CLIP1P30622 1438 aa21.87■■□□□ 1.09
POLR2J3-219ENST00000608621 LRRIQ1Q96JM4 1722 aa21.86■■□□□ 1.09
POLR2J3-219ENST00000608621 SIGLEC1Q9BZZ2 1709 aa21.86■■□□□ 1.09
POLR2J3-219ENST00000608621 AFAP1Q8N556 730 aa21.84■■□□□ 1.09
POLR2J3-219ENST00000608621 ATP10AO60312 1499 aa21.83■■□□□ 1.09
POLR2J3-219ENST00000608621 CASKIN1Q8WXD9 1431 aa21.82■■□□□ 1.08
POLR2J3-219ENST00000608621 ARHGAP5Q13017 1502 aa21.82■■□□□ 1.08
POLR2J3-219ENST00000608621 MYT1LQ9UL68 1186 aa21.81■■□□□ 1.08
POLR2J3-219ENST00000608621 PCF11O94913 1555 aaKnown RBP21.81■■□□□ 1.08
POLR2J3-219ENST00000608621 LMTK3Q96Q04 1460 aa21.8■■□□□ 1.08
POLR2J3-219ENST00000608621 ZNF518AQ6AHZ1 1483 aa21.78■■□□□ 1.08
POLR2J3-219ENST00000608621 HSPA2P54652 639 aa21.78■■□□□ 1.08
POLR2J3-219ENST00000608621 C9orf84Q5VXU9 1444 aa21.78■■□□□ 1.08
POLR2J3-219ENST00000608621 CCDC18Q5T9S5 1454 aa21.77■■□□□ 1.08
POLR2J3-219ENST00000608621 CDC42BPBQ9Y5S2 1711 aa21.76■■□□□ 1.07
POLR2J3-219ENST00000608621 FER1L4A9Z1Z3 1794 aa21.73■■□□□ 1.07
POLR2J3-219ENST00000608621 CEBPAP49715 358 aaPredicted RBP21.72■■□□□ 1.07
POLR2J3-219ENST00000608621 KDM5CP41229 1560 aa21.72■■□□□ 1.07
POLR2J3-219ENST00000608621 ARHGEF12Q9NZN5 1544 aa21.71■■□□□ 1.07
POLR2J3-219ENST00000608621 FBXO41Q8TF61 875 aa21.71■■□□□ 1.07
POLR2J3-219ENST00000608621 TRAPPC8Q9Y2L5 1435 aa21.7■■□□□ 1.06
POLR2J3-219ENST00000608621 FYCO1Q9BQS8 1478 aa21.7■■□□□ 1.06
POLR2J3-219ENST00000608621 PREX2Q70Z35 1606 aa21.69■■□□□ 1.06
POLR2J3-219ENST00000608621 ZNF777Q9ULD5 760 aaPredicted RBP21.68■■□□□ 1.06
POLR2J3-219ENST00000608621 MLH3Q9UHC1 1453 aa21.68■■□□□ 1.06
POLR2J3-219ENST00000608621 DIP2CQ9Y2E4 1556 aa21.66■■□□□ 1.06
POLR2J3-219ENST00000608621 ABCC1P33527 1531 aa21.65■■□□□ 1.06
POLR2J3-219ENST00000608621 CDC42BPAQ5VT25 1732 aa21.64■■□□□ 1.06
POLR2J3-219ENST00000608621 ABCA6Q8N139 1617 aa21.62■■□□□ 1.05
POLR2J3-219ENST00000608621 ITSN2Q9NZM3 1697 aa21.62■■□□□ 1.05
POLR2J3-219ENST00000608621 HNRNPMP52272 730 aaKnown RBP eCLIP21.61■■□□□ 1.05
POLR2J3-219ENST00000608621 REREQ9P2R6 1566 aa21.61■■□□□ 1.05
POLR2J3-219ENST00000608621 GPATCH8Q9UKJ3 1502 aaKnown RBP21.6■■□□□ 1.05
POLR2J3-219ENST00000608621 ESF1Q9H501 851 aaKnown RBP21.59■■□□□ 1.05
POLR2J3-219ENST00000608621 CFDP1Q9UEE9 299 aaPredicted RBP21.58■■□□□ 1.05
POLR2J3-219ENST00000608621 KIDINS220Q9ULH0 1771 aa21.58■■□□□ 1.04
POLR2J3-219ENST00000608621 AGLP35573 1532 aa21.57■■□□□ 1.04
POLR2J3-219ENST00000608621 SETD1BQ9UPS6 1966 aaKnown RBP21.56■■□□□ 1.04
POLR2J3-219ENST00000608621 SAMD9LQ8IVG5 1584 aa21.56■■□□□ 1.04
POLR2J3-219ENST00000608621 PREX1Q8TCU6 1659 aa21.56■■□□□ 1.04
POLR2J3-219ENST00000608621 SPAG9O60271 1321 aaKnown RBP21.55■■□□□ 1.04
POLR2J3-219ENST00000608621 MTUS2Q5JR59 1369 aa21.55■■□□□ 1.04
POLR2J3-219ENST00000608621 CCNB3Q8WWL7 1395 aa21.55■■□□□ 1.04
POLR2J3-219ENST00000608621 SYCP2Q9BX26 1530 aa21.53■■□□□ 1.04
POLR2J3-219ENST00000608621 UHRF1BP1Q6BDS2 1440 aa21.52■■□□□ 1.04
POLR2J3-219ENST00000608621 CERKQ8TCT0 537 aa21.51■■□□□ 1.03
POLR2J3-219ENST00000608621 KIAA1107Q9UPP5 1409 aa21.51■■□□□ 1.03
POLR2J3-219ENST00000608621 C3P01024 1663 aa21.5■■□□□ 1.03
POLR2J3-219ENST00000608621 DMRT2Q9Y5R5 561 aa21.49■■□□□ 1.03
POLR2J3-219ENST00000608621 PLEKHH2Q8IVE3 1493 aa21.48■■□□□ 1.03
POLR2J3-219ENST00000608621 ZNF644Q9H582 1327 aaPredicted RBP21.48■■□□□ 1.03
POLR2J3-219ENST00000608621 CNTLNQ9NXG0 1405 aa21.46■■□□□ 1.03
POLR2J3-219ENST00000608621 CEP162Q5TB80 1403 aa21.46■■□□□ 1.03
POLR2J3-219ENST00000608621 STRCQ7RTU9 1775 aa21.44■■□□□ 1.02
POLR2J3-219ENST00000608621 ATP7AQ04656 1500 aa21.44■■□□□ 1.02
POLR2J3-219ENST00000608621 SUPT6HQ7KZ85 1726 aaKnown RBP21.43■■□□□ 1.02
POLR2J3-219ENST00000608621 ZMYM3Q14202 1370 aa21.42■■□□□ 1.02
POLR2J3-219ENST00000608621 A2MP01023 1474 aa21.41■■□□□ 1.02
POLR2J3-219ENST00000608621 GGT6Q6P531 493 aa21.41■■□□□ 1.02
POLR2J3-219ENST00000608621 TIAM1Q13009 1591 aa21.4■■□□□ 1.02
POLR2J3-219ENST00000608621 EHBP1L1Q8N3D4 1523 aa21.4■■□□□ 1.02
POLR2J3-219ENST00000608621 INO80Q9ULG1 1556 aaPredicted RBP21.4■■□□□ 1.02
POLR2J3-219ENST00000608621 MBD5Q9P267 1494 aa21.38■■□□□ 1.01
POLR2J3-219ENST00000608621 LOC105371045A0A1W2PR82 267 aa21.37■■□□□ 1.01
POLR2J3-219ENST00000608621 MROH2AA6NES4 1674 aa21.36■■□□□ 1.01
POLR2J3-219ENST00000608621 NPATQ14207 1427 aa21.36■■□□□ 1.01
POLR2J3-219ENST00000608621 PLXNC1O60486 1568 aa21.36■■□□□ 1.01
POLR2J3-219ENST00000608621 PTPRTO14522 1441 aa21.35■■□□□ 1.01
POLR2J3-219ENST00000608621 PPP6R1Q9UPN7 881 aa21.34■■□□□ 1.01
POLR2J3-219ENST00000608621 RTEL1-TNFRSF6BF6WH68 1400 aa21.33■■□□□ 1.01
POLR2J3-219ENST00000608621 CLTCQ00610 1675 aaKnown RBP21.33■■□□□ 1
POLR2J3-219ENST00000608621 NCOA2Q15596 1464 aa21.32■■□□□ 1
POLR2J3-219ENST00000608621 DHX29Q7Z478 1369 aaKnown RBP21.31■■□□□ 1
POLR2J3-219ENST00000608621 ADGBQ8N7X0 1667 aa21.31■■□□□ 1
POLR2J3-219ENST00000608621 RSPH4AQ5TD94 716 aa21.3■■□□□ 1
POLR2J3-219ENST00000608621 NCOA1Q15788 1441 aa21.29■■□□□ 1
POLR2J3-219ENST00000608621 PTPRKQ15262 1439 aa21.29■■□□□ 1
POLR2J3-219ENST00000608621 NCKAP5LQ9HCH0 1330 aa21.28■■□□□ 1
POLR2J3-219ENST00000608621 CAMSAP1Q5T5Y3 1602 aa21.27■■□□□ 1
POLR2J3-219ENST00000608621 KIF3BO15066 747 aa21.27■■□□□ 1
POLR2J3-219ENST00000608621 CAMSAP2Q08AD1 1489 aa21.26■□□□□ 0.99
POLR2J3-219ENST00000608621 CCDC141Q6ZP82 1450 aa21.25■□□□□ 0.99
POLR2J3-219ENST00000608621 TSPY4P0CV99 314 aa21.24■□□□□ 0.99
POLR2J3-219ENST00000608621 TSPY10P0CW01 314 aa21.24■□□□□ 0.99
POLR2J3-219ENST00000608621 VPS8Q8N3P4 1428 aa21.23■□□□□ 0.99
POLR2J3-219ENST00000608621 LRRC9Q6ZRR7 1453 aa21.21■□□□□ 0.99
POLR2J3-219ENST00000608621 KANK4Q5T7N3 995 aaPredicted RBP21.21■□□□□ 0.99
POLR2J3-219ENST00000608621 LTBP4Q8N2S1 1624 aa21.21■□□□□ 0.99
POLR2J3-219ENST00000608621 PKD2Q13563 968 aa21.2■□□□□ 0.98
POLR2J3-219ENST00000608621 FBXO31Q5XUX0 539 aaPredicted RBP21.2■□□□□ 0.98
POLR2J3-219ENST00000608621 MYO3AQ8NEV4 1616 aa21.19■□□□□ 0.98
POLR2J3-219ENST00000608621 CEP170BQ9Y4F5 1589 aaPredicted RBP21.19■□□□□ 0.98
POLR2J3-219ENST00000608621 WASHC2CQ9Y4E1 1318 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms