RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 ZNF777Q9ULD5 760 aaPredicted RBP26.14■■□□□ 1.78
LINC00240-203ENST00000606878 CCNB3Q8WWL7 1395 aa26.13■■□□□ 1.77
LINC00240-203ENST00000606878 CFDP1Q9UEE9 299 aaPredicted RBP26.13■■□□□ 1.77
LINC00240-203ENST00000606878 AFAP1Q8N556 730 aa26.11■■□□□ 1.77
LINC00240-203ENST00000606878 APLP2Q06481 763 aa26.1■■□□□ 1.77
LINC00240-203ENST00000606878 GPATCH8Q9UKJ3 1502 aaKnown RBP26.09■■□□□ 1.77
LINC00240-203ENST00000606878 POGZQ7Z3K3 1410 aa26.08■■□□□ 1.77
LINC00240-203ENST00000606878 MYT1LQ9UL68 1186 aa26.08■■□□□ 1.77
LINC00240-203ENST00000606878 ARID4BQ4LE39 1312 aaPredicted RBP26.08■■□□□ 1.77
LINC00240-203ENST00000606878 FRMPD1Q5SYB0 1578 aa26.07■■□□□ 1.76
LINC00240-203ENST00000606878 MAGI2Q86UL8 1455 aa26.05■■□□□ 1.76
LINC00240-203ENST00000606878 EHBP1L1Q8N3D4 1523 aa26.04■■□□□ 1.76
LINC00240-203ENST00000606878 RICTORQ6R327 1708 aa26.03■■□□□ 1.76
LINC00240-203ENST00000606878 CDC42BPBQ9Y5S2 1711 aa26.03■■□□□ 1.76
LINC00240-203ENST00000606878 PREX2Q70Z35 1606 aa26.02■■□□□ 1.76
LINC00240-203ENST00000606878 HNRNPMP52272 730 aaKnown RBP eCLIP26.01■■□□□ 1.752e-15■■■■□ 23
LINC00240-203ENST00000606878 ZNF518AQ6AHZ1 1483 aa26.01■■□□□ 1.75
LINC00240-203ENST00000606878 KANK4Q5T7N3 995 aaPredicted RBP26■■□□□ 1.75
LINC00240-203ENST00000606878 TIAM1Q13009 1591 aa25.99■■□□□ 1.75
LINC00240-203ENST00000606878 ZMYM4Q5VZL5 1548 aa25.99■■□□□ 1.75
LINC00240-203ENST00000606878 YEATS2Q9ULM3 1422 aa25.98■■□□□ 1.75
LINC00240-203ENST00000606878 MAP3K1Q13233 1512 aa25.98■■□□□ 1.75
LINC00240-203ENST00000606878 CDC42BPAQ5VT25 1732 aa25.97■■□□□ 1.75
LINC00240-203ENST00000606878 ZFYVE16Q7Z3T8 1539 aa25.97■■□□□ 1.75
LINC00240-203ENST00000606878 LRRC9Q6ZRR7 1453 aa25.97■■□□□ 1.75
LINC00240-203ENST00000606878 TRAPPC8Q9Y2L5 1435 aa25.97■■□□□ 1.75
LINC00240-203ENST00000606878 ARHGEF12Q9NZN5 1544 aa25.96■■□□□ 1.75
LINC00240-203ENST00000606878 NCOA2Q15596 1464 aa25.95■■□□□ 1.74
LINC00240-203ENST00000606878 KIAA1107Q9UPP5 1409 aa25.95■■□□□ 1.74
LINC00240-203ENST00000606878 ZNF644Q9H582 1327 aaPredicted RBP25.94■■□□□ 1.74
LINC00240-203ENST00000606878 PLEKHH2Q8IVE3 1493 aa25.94■■□□□ 1.74
LINC00240-203ENST00000606878 ATP10AO60312 1499 aa25.93■■□□□ 1.74
LINC00240-203ENST00000606878 ABCC1P33527 1531 aa25.93■■□□□ 1.74
LINC00240-203ENST00000606878 ARHGEF40Q8TER5 1519 aa25.92■■□□□ 1.74
LINC00240-203ENST00000606878 MLH3Q9UHC1 1453 aa25.9■■□□□ 1.74
LINC00240-203ENST00000606878 SPAG9O60271 1321 aaKnown RBP25.89■■□□□ 1.74
LINC00240-203ENST00000606878 SUPT6HQ7KZ85 1726 aaKnown RBP25.88■■□□□ 1.73
LINC00240-203ENST00000606878 MLECQ14165 292 aa25.88■■□□□ 1.73
LINC00240-203ENST00000606878 KDM5CP41229 1560 aa25.87■■□□□ 1.73
LINC00240-203ENST00000606878 SAMD9LQ8IVG5 1584 aa25.87■■□□□ 1.73
LINC00240-203ENST00000606878 RSPH4AQ5TD94 716 aa25.87■■□□□ 1.73
LINC00240-203ENST00000606878 C9orf84Q5VXU9 1444 aa25.85■■□□□ 1.73
LINC00240-203ENST00000606878 SYCP2Q9BX26 1530 aa25.83■■□□□ 1.73
LINC00240-203ENST00000606878 ITSN2Q9NZM3 1697 aa25.82■■□□□ 1.72
LINC00240-203ENST00000606878 HECW2Q9P2P5 1572 aa25.8■■□□□ 1.72
LINC00240-203ENST00000606878 MBD5Q9P267 1494 aa25.78■■□□□ 1.72
LINC00240-203ENST00000606878 TSPY4P0CV99 314 aa25.76■■□□□ 1.71
LINC00240-203ENST00000606878 TSPY10P0CW01 314 aa25.76■■□□□ 1.71
LINC00240-203ENST00000606878 ADAMTSL3P82987 1691 aa25.76■■□□□ 1.71
LINC00240-203ENST00000606878 BCORL1Q5H9F3 1711 aa25.76■■□□□ 1.71
LINC00240-203ENST00000606878 MYOM3Q5VTT5 1437 aa25.74■■□□□ 1.71
LINC00240-203ENST00000606878 DIP2CQ9Y2E4 1556 aa25.73■■□□□ 1.71
LINC00240-203ENST00000606878 PTPRMP28827 1452 aa25.73■■□□□ 1.71
LINC00240-203ENST00000606878 MIA2Q96PC5 1412 aa25.73■■□□□ 1.71
LINC00240-203ENST00000606878 CAMSAP2Q08AD1 1489 aa25.72■■□□□ 1.71
LINC00240-203ENST00000606878 KIDINS220Q9ULH0 1771 aa25.71■■□□□ 1.71
LINC00240-203ENST00000606878 ESF1Q9H501 851 aaKnown RBP25.7■■□□□ 1.7
LINC00240-203ENST00000606878 RTEL1-TNFRSF6BF6WH68 1400 aa25.7■■□□□ 1.7
LINC00240-203ENST00000606878 PLPPR3Q6T4P5 718 aa25.69■■□□□ 1.7
LINC00240-203ENST00000606878 ABCA6Q8N139 1617 aa25.69■■□□□ 1.7
LINC00240-203ENST00000606878 REREQ9P2R6 1566 aa25.68■■□□□ 1.7
LINC00240-203ENST00000606878 ATP7AQ04656 1500 aa25.68■■□□□ 1.7
LINC00240-203ENST00000606878 CCDC141Q6ZP82 1450 aa25.67■■□□□ 1.7
LINC00240-203ENST00000606878 SIGLEC1Q9BZZ2 1709 aa25.67■■□□□ 1.7
LINC00240-203ENST00000606878 MADDQ8WXG6 1647 aa25.66■■□□□ 1.7
LINC00240-203ENST00000606878 AGLP35573 1532 aa25.66■■□□□ 1.7
LINC00240-203ENST00000606878 A2MP01023 1474 aa25.64■■□□□ 1.69
LINC00240-203ENST00000606878 INO80Q9ULG1 1556 aaPredicted RBP25.61■■□□□ 1.69
LINC00240-203ENST00000606878 DHX29Q7Z478 1369 aaKnown RBP25.6■■□□□ 1.69
LINC00240-203ENST00000606878 GGT6Q6P531 493 aa25.6■■□□□ 1.69
LINC00240-203ENST00000606878 ARHGEF5Q12774 1597 aa25.6■■□□□ 1.69
LINC00240-203ENST00000606878 CEBPAP49715 358 aaPredicted RBP25.59■■□□□ 1.69
LINC00240-203ENST00000606878 RIMS1Q86UR5 1692 aaKnown RBP25.58■■□□□ 1.68
LINC00240-203ENST00000606878 PPP6R1Q9UPN7 881 aa25.57■■□□□ 1.68
LINC00240-203ENST00000606878 FGD6Q6ZV73 1430 aa25.56■■□□□ 1.68
LINC00240-203ENST00000606878 KIF3BO15066 747 aa25.55■■□□□ 1.68
LINC00240-203ENST00000606878 PPARGC1BQ86YN6 1023 aaKnown RBP25.54■■□□□ 1.68
LINC00240-203ENST00000606878 FAM50AQ14320 339 aaKnown RBP25.53■■□□□ 1.68
LINC00240-203ENST00000606878 FER1L4A9Z1Z3 1794 aa25.51■■□□□ 1.67
LINC00240-203ENST00000606878 CNTLNQ9NXG0 1405 aa25.51■■□□□ 1.67
LINC00240-203ENST00000606878 PTPN23Q9H3S7 1636 aa25.5■■□□□ 1.67
LINC00240-203ENST00000606878 ADGBQ8N7X0 1667 aa25.49■■□□□ 1.67
LINC00240-203ENST00000606878 ABCC5O15440 1437 aa25.49■■□□□ 1.67
LINC00240-203ENST00000606878 PLXNC1O60486 1568 aa25.48■■□□□ 1.67
LINC00240-203ENST00000606878 TCOF1Q13428 1488 aaKnown RBP25.48■■□□□ 1.67
LINC00240-203ENST00000606878 ZMYM3Q14202 1370 aa25.46■■□□□ 1.67
LINC00240-203ENST00000606878 RRP7BPQ9NSQ0 103 aa25.46■■□□□ 1.67
LINC00240-203ENST00000606878 CHIC2Q9UKJ5 165 aa25.45■■□□□ 1.66
LINC00240-203ENST00000606878 DAPK1P53355 1430 aa25.44■■□□□ 1.66
LINC00240-203ENST00000606878 MAST1Q9Y2H9 1570 aa25.44■■□□□ 1.66
LINC00240-203ENST00000606878 WASHC2CQ9Y4E1 1318 aa25.41■■□□□ 1.66
LINC00240-203ENST00000606878 ANKRD30AQ9BXX3 1397 aa25.39■■□□□ 1.65
LINC00240-203ENST00000606878 SHANK2Q9UPX8 1470 aa25.39■■□□□ 1.65
LINC00240-203ENST00000606878 HSPA2P54652 639 aa25.38■■□□□ 1.65
LINC00240-203ENST00000606878 KIF15Q9NS87 1388 aa25.38■■□□□ 1.65
LINC00240-203ENST00000606878 SETD1BQ9UPS6 1966 aaKnown RBP25.37■■□□□ 1.65
LINC00240-203ENST00000606878 LMTK3Q96Q04 1460 aa25.37■■□□□ 1.65
LINC00240-203ENST00000606878 DNMT1P26358 1616 aaKnown RBP25.34■■□□□ 1.65
LINC00240-203ENST00000606878 DUOX2Q9NRD8 1548 aa25.33■■□□□ 1.65
LINC00240-203ENST00000606878 NCOA1Q15788 1441 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms