RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 CDC42BPBQ9Y5S2 1711 aa17.26■□□□□ 0.35
TUBE1-210ENST00000604967 POGZQ7Z3K3 1410 aa17.24■□□□□ 0.35
TUBE1-210ENST00000604967 ZMYM4Q5VZL5 1548 aa17.24■□□□□ 0.35
TUBE1-210ENST00000604967 ARHGEF12Q9NZN5 1544 aa17.24■□□□□ 0.35
TUBE1-210ENST00000604967 ARHGEF40Q8TER5 1519 aa17.23■□□□□ 0.35
TUBE1-210ENST00000604967 EFCAB2Q5VUJ9 269 aa17.22■□□□□ 0.35
TUBE1-210ENST00000604967 ARHGAP5Q13017 1502 aa17.21■□□□□ 0.35
TUBE1-210ENST00000604967 PREX2Q70Z35 1606 aa17.21■□□□□ 0.35
TUBE1-210ENST00000604967 CDC42BPAQ5VT25 1732 aa17.21■□□□□ 0.35
TUBE1-210ENST00000604967 GPATCH8Q9UKJ3 1502 aaKnown RBP17.21■□□□□ 0.34
TUBE1-210ENST00000604967 AFAP1Q8N556 730 aa17.19■□□□□ 0.34
TUBE1-210ENST00000604967 ADAMTSL3P82987 1691 aa17.18■□□□□ 0.34
TUBE1-210ENST00000604967 TRAPPC8Q9Y2L5 1435 aa17.18■□□□□ 0.34
TUBE1-210ENST00000604967 ABCC1P33527 1531 aa17.16■□□□□ 0.34
TUBE1-210ENST00000604967 ZFYVE16Q7Z3T8 1539 aa17.16■□□□□ 0.34
TUBE1-210ENST00000604967 KDM5CP41229 1560 aa17.16■□□□□ 0.34
TUBE1-210ENST00000604967 SAMD9LQ8IVG5 1584 aa17.15■□□□□ 0.34
TUBE1-210ENST00000604967 VPS8Q8N3P4 1428 aa17.14■□□□□ 0.33
TUBE1-210ENST00000604967 BCORL1Q5H9F3 1711 aa17.14■□□□□ 0.33
TUBE1-210ENST00000604967 MAGI2Q86UL8 1455 aa17.13■□□□□ 0.33
TUBE1-210ENST00000604967 MTUS2Q5JR59 1369 aa17.13■□□□□ 0.33
TUBE1-210ENST00000604967 TIAM1Q13009 1591 aa17.12■□□□□ 0.33
TUBE1-210ENST00000604967 ITSN2Q9NZM3 1697 aa17.12■□□□□ 0.33
TUBE1-210ENST00000604967 ZNF518AQ6AHZ1 1483 aa17.12■□□□□ 0.33
TUBE1-210ENST00000604967 MADDQ8WXG6 1647 aa17.11■□□□□ 0.33
TUBE1-210ENST00000604967 EHBP1L1Q8N3D4 1523 aa17.11■□□□□ 0.33
TUBE1-210ENST00000604967 ZNF644Q9H582 1327 aaPredicted RBP17.1■□□□□ 0.33
TUBE1-210ENST00000604967 KANK4Q5T7N3 995 aaPredicted RBP17.09■□□□□ 0.33
TUBE1-210ENST00000604967 ATP10AO60312 1499 aa17.09■□□□□ 0.33
TUBE1-210ENST00000604967 SYCP2Q9BX26 1530 aa17.09■□□□□ 0.33
TUBE1-210ENST00000604967 DIP2CQ9Y2E4 1556 aa17.09■□□□□ 0.33
TUBE1-210ENST00000604967 ABCA6Q8N139 1617 aa17.08■□□□□ 0.32
TUBE1-210ENST00000604967 PTPRMP28827 1452 aa17.08■□□□□ 0.32
TUBE1-210ENST00000604967 CCNB3Q8WWL7 1395 aa17.08■□□□□ 0.32
TUBE1-210ENST00000604967 ARID4BQ4LE39 1312 aaPredicted RBP17.08■□□□□ 0.32
TUBE1-210ENST00000604967 ZNF777Q9ULD5 760 aaPredicted RBP17.08■□□□□ 0.32
TUBE1-210ENST00000604967 HECW2Q9P2P5 1572 aa17.07■□□□□ 0.32
TUBE1-210ENST00000604967 MLH3Q9UHC1 1453 aa17.07■□□□□ 0.32
TUBE1-210ENST00000604967 HNRNPMP52272 730 aaKnown RBP eCLIP17.07■□□□□ 0.32
TUBE1-210ENST00000604967 NCOA2Q15596 1464 aa17.06■□□□□ 0.32
TUBE1-210ENST00000604967 KIDINS220Q9ULH0 1771 aa17.06■□□□□ 0.32
TUBE1-210ENST00000604967 CFDP1Q9UEE9 299 aaPredicted RBP17.05■□□□□ 0.32
TUBE1-210ENST00000604967 LRRC9Q6ZRR7 1453 aa17.05■□□□□ 0.32
TUBE1-210ENST00000604967 C9orf84Q5VXU9 1444 aa17.04■□□□□ 0.32
TUBE1-210ENST00000604967 MBD5Q9P267 1494 aa17.04■□□□□ 0.32
TUBE1-210ENST00000604967 MLECQ14165 292 aa17.03■□□□□ 0.32
TUBE1-210ENST00000604967 KIAA1107Q9UPP5 1409 aa17.03■□□□□ 0.32
TUBE1-210ENST00000604967 RIMS1Q86UR5 1692 aaKnown RBP17.02■□□□□ 0.32
TUBE1-210ENST00000604967 REREQ9P2R6 1566 aa17■□□□□ 0.31
TUBE1-210ENST00000604967 MAP3K1Q13233 1512 aa17■□□□□ 0.31
TUBE1-210ENST00000604967 SUPT6HQ7KZ85 1726 aaKnown RBP16.99■□□□□ 0.31
TUBE1-210ENST00000604967 INO80Q9ULG1 1556 aaPredicted RBP16.98■□□□□ 0.31
TUBE1-210ENST00000604967 PLEKHH2Q8IVE3 1493 aa16.96■□□□□ 0.31
TUBE1-210ENST00000604967 ATP7AQ04656 1500 aa16.96■□□□□ 0.3
TUBE1-210ENST00000604967 SPAG9O60271 1321 aaKnown RBP16.96■□□□□ 0.3
TUBE1-210ENST00000604967 CAMSAP2Q08AD1 1489 aa16.95■□□□□ 0.3
TUBE1-210ENST00000604967 AGLP35573 1532 aa16.95■□□□□ 0.3
TUBE1-210ENST00000604967 FER1L4A9Z1Z3 1794 aa16.94■□□□□ 0.3
TUBE1-210ENST00000604967 MYT1LQ9UL68 1186 aa16.94■□□□□ 0.3
TUBE1-210ENST00000604967 CEBPAP49715 358 aaPredicted RBP16.93■□□□□ 0.3
TUBE1-210ENST00000604967 PLXNC1O60486 1568 aa16.93■□□□□ 0.3
TUBE1-210ENST00000604967 PLPPR3Q6T4P5 718 aa16.92■□□□□ 0.3
TUBE1-210ENST00000604967 LMTK3Q96Q04 1460 aa16.92■□□□□ 0.3
TUBE1-210ENST00000604967 MYOM3Q5VTT5 1437 aa16.88■□□□□ 0.29
TUBE1-210ENST00000604967 A2MP01023 1474 aa16.88■□□□□ 0.29
TUBE1-210ENST00000604967 CCDC141Q6ZP82 1450 aa16.86■□□□□ 0.29
TUBE1-210ENST00000604967 ARHGEF5Q12774 1597 aa16.86■□□□□ 0.29
TUBE1-210ENST00000604967 RTEL1-TNFRSF6BF6WH68 1400 aa16.86■□□□□ 0.29
TUBE1-210ENST00000604967 ADGBQ8N7X0 1667 aa16.85■□□□□ 0.29
TUBE1-210ENST00000604967 HSPA2P54652 639 aa16.84■□□□□ 0.29
TUBE1-210ENST00000604967 C3P01024 1663 aa16.83■□□□□ 0.28
TUBE1-210ENST00000604967 MIA2Q96PC5 1412 aa16.82■□□□□ 0.28
TUBE1-210ENST00000604967 DHX29Q7Z478 1369 aaKnown RBP16.8■□□□□ 0.28
TUBE1-210ENST00000604967 MAST1Q9Y2H9 1570 aa16.78■□□□□ 0.28
TUBE1-210ENST00000604967 ABCC5O15440 1437 aa16.78■□□□□ 0.28
TUBE1-210ENST00000604967 FGD6Q6ZV73 1430 aa16.78■□□□□ 0.28
TUBE1-210ENST00000604967 PTPN23Q9H3S7 1636 aa16.78■□□□□ 0.28
TUBE1-210ENST00000604967 TCOF1Q13428 1488 aaKnown RBP16.77■□□□□ 0.28
TUBE1-210ENST00000604967 CLTCQ00610 1675 aaKnown RBP16.76■□□□□ 0.27
TUBE1-210ENST00000604967 RSPH4AQ5TD94 716 aa16.76■□□□□ 0.27
TUBE1-210ENST00000604967 GGT6Q6P531 493 aa16.76■□□□□ 0.27
TUBE1-210ENST00000604967 ZMYM3Q14202 1370 aa16.76■□□□□ 0.27
TUBE1-210ENST00000604967 CNTLNQ9NXG0 1405 aa16.74■□□□□ 0.27
TUBE1-210ENST00000604967 APLP2Q06481 763 aa16.74■□□□□ 0.27
TUBE1-210ENST00000604967 PREX1Q8TCU6 1659 aa16.74■□□□□ 0.27
TUBE1-210ENST00000604967 MROH2AA6NES4 1674 aa16.73■□□□□ 0.27
TUBE1-210ENST00000604967 PTPRKQ15262 1439 aa16.72■□□□□ 0.27
TUBE1-210ENST00000604967 KIF3BO15066 747 aa16.72■□□□□ 0.27
TUBE1-210ENST00000604967 TSPY4P0CV99 314 aa16.71■□□□□ 0.27
TUBE1-210ENST00000604967 TSPY10P0CW01 314 aa16.71■□□□□ 0.27
TUBE1-210ENST00000604967 CROCC2H7BZ55 1655 aa16.71■□□□□ 0.27
TUBE1-210ENST00000604967 DAPK1P53355 1430 aa16.7■□□□□ 0.26
TUBE1-210ENST00000604967 DNMT1P26358 1616 aaKnown RBP16.7■□□□□ 0.26
TUBE1-210ENST00000604967 MROH1Q8NDA8 1641 aa16.7■□□□□ 0.26
TUBE1-210ENST00000604967 PPARGC1BQ86YN6 1023 aaKnown RBP16.7■□□□□ 0.26
TUBE1-210ENST00000604967 SHANK2Q9UPX8 1470 aa16.68■□□□□ 0.26
TUBE1-210ENST00000604967 STRCQ7RTU9 1775 aa16.68■□□□□ 0.26
TUBE1-210ENST00000604967 NPATQ14207 1427 aa16.68■□□□□ 0.26
TUBE1-210ENST00000604967 RNF17Q9BXT8 1623 aaKnown RBP16.67■□□□□ 0.26
TUBE1-210ENST00000604967 FBXO31Q5XUX0 539 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms