RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 NBR1Q14596 966 aa8.12□□□□□ -1.11
COL4A3BP-207ENST00000604926 RNF216Q9NWF9 866 aaPredicted RBP8.12□□□□□ -1.11
COL4A3BP-207ENST00000604926 BBXQ8WY36 941 aaPredicted RBP8.11□□□□□ -1.11
COL4A3BP-207ENST00000604926 PLCD4Q9BRC7 762 aa8.11□□□□□ -1.11
COL4A3BP-207ENST00000604926 URB2Q14146 1524 aaKnown RBP8.1□□□□□ -1.11
COL4A3BP-207ENST00000604926 FTSJ3Q8IY81 847 aaKnown RBP8.1□□□□□ -1.11
COL4A3BP-207ENST00000604926 NPM1P06748 294 aaKnown RBP eCLIP8.09□□□□□ -1.11
COL4A3BP-207ENST00000604926 FAM177A1Q8N128 213 aaPredicted RBP8.09□□□□□ -1.11
COL4A3BP-207ENST00000604926 ARID4BQ4LE39 1312 aaPredicted RBP8.08□□□□□ -1.12
COL4A3BP-207ENST00000604926 FOXD4L5Q5VV16 416 aaPredicted RBP8.08□□□□□ -1.12
COL4A3BP-207ENST00000604926 FOXD4L4Q8WXT5 416 aaPredicted RBP8.08□□□□□ -1.12
COL4A3BP-207ENST00000604926 PPRC1Q5VV67 1664 aaKnown RBP8.08□□□□□ -1.12
COL4A3BP-207ENST00000604926 TOP2BQ02880 1626 aa8.08□□□□□ -1.12
COL4A3BP-207ENST00000604926 RBM25P49756 843 aaKnown RBP8.08□□□□□ -1.12
COL4A3BP-207ENST00000604926 RAD21O60216 631 aa8.07□□□□□ -1.12
COL4A3BP-207ENST00000604926 ADAMTS12P58397 1594 aa8.07□□□□□ -1.12
COL4A3BP-207ENST00000604926 TSHZ2Q9NRE2 1034 aa8.07□□□□□ -1.12
COL4A3BP-207ENST00000604926 MTMR7Q9Y216 660 aa8.07□□□□□ -1.12
COL4A3BP-207ENST00000604926 USP35Q9P2H5 1018 aa8.06□□□□□ -1.12
COL4A3BP-207ENST00000604926 CUL7Q14999 1698 aa8.05□□□□□ -1.12
COL4A3BP-207ENST00000604926 KCTD17Q8N5Z5 321 aa8.05□□□□□ -1.12
COL4A3BP-207ENST00000604926 ERICH3Q5RHP9 1530 aa8.05□□□□□ -1.12
COL4A3BP-207ENST00000604926 CC2D2BQ6DHV5 1058 aa8.05□□□□□ -1.12
COL4A3BP-207ENST00000604926 MROH2BQ7Z745 1585 aa8.04□□□□□ -1.12
COL4A3BP-207ENST00000604926 PPM1GO15355 546 aaPredicted RBP8.04□□□□□ -1.12
COL4A3BP-207ENST00000604926 GTF2E1P29083 439 aaPredicted RBP8.04□□□□□ -1.12
COL4A3BP-207ENST00000604926 GRIPAP1Q4V328 841 aa8.04□□□□□ -1.12
COL4A3BP-207ENST00000604926 MAP3K4Q9Y6R4 1608 aa8.04□□□□□ -1.12
COL4A3BP-207ENST00000604926 PTMSP20962 102 aa8.02□□□□□ -1.12
COL4A3BP-207ENST00000604926 RGS22Q8NE09 1264 aa8.02□□□□□ -1.12
COL4A3BP-207ENST00000604926 CCDC27Q2M243 656 aa8.02□□□□□ -1.13
COL4A3BP-207ENST00000604926 ARID3CA6NKF2 412 aa8.02□□□□□ -1.13
COL4A3BP-207ENST00000604926 DIP2BQ9P265 1576 aa8.02□□□□□ -1.13
COL4A3BP-207ENST00000604926 ADRA2BP18089 450 aa8.01□□□□□ -1.13
COL4A3BP-207ENST00000604926 KDM4AO75164 1064 aa8.01□□□□□ -1.13
COL4A3BP-207ENST00000604926 FOXD1Q16676 465 aa8.01□□□□□ -1.13
COL4A3BP-207ENST00000604926 NPM3O75607 178 aaKnown RBP8□□□□□ -1.13
COL4A3BP-207ENST00000604926 WIZO95785 1651 aa8□□□□□ -1.13
COL4A3BP-207ENST00000604926 ANAPC15P60006 121 aa8□□□□□ -1.13
COL4A3BP-207ENST00000604926 OS9Q13438 667 aaPredicted RBP8□□□□□ -1.13
COL4A3BP-207ENST00000604926 TOPBP1Q92547 1522 aa8□□□□□ -1.13
COL4A3BP-207ENST00000604926 FANCD2Q9BXW9 1451 aa7.99□□□□□ -1.13
COL4A3BP-207ENST00000604926 RUSC2Q8N2Y8 1516 aa7.99□□□□□ -1.13
COL4A3BP-207ENST00000604926 PIAS4Q8N2W9 510 aaPredicted RBP7.99□□□□□ -1.13
COL4A3BP-207ENST00000604926 PATL2C9JE40 543 aaKnown RBP7.98□□□□□ -1.13
COL4A3BP-207ENST00000604926 ABCA10Q8WWZ4 1543 aa7.98□□□□□ -1.13
COL4A3BP-207ENST00000604926 BRPF1P55201 1214 aaPredicted RBP7.97□□□□□ -1.13
COL4A3BP-207ENST00000604926 UHRF1BP1LA0JNW5 1464 aa7.97□□□□□ -1.13
COL4A3BP-207ENST00000604926 MCCP23508 829 aa7.97□□□□□ -1.13
COL4A3BP-207ENST00000604926 CANXP27824 592 aaKnown RBP7.97□□□□□ -1.13
COL4A3BP-207ENST00000604926 FAM193AP78312 1265 aa7.97□□□□□ -1.13
COL4A3BP-207ENST00000604926 NUP160Q12769 1436 aa7.96□□□□□ -1.13
COL4A3BP-207ENST00000604926 STAC3Q96MF2 364 aa7.96□□□□□ -1.13
COL4A3BP-207ENST00000604926 IL27Q8NEV9 243 aa7.96□□□□□ -1.14
COL4A3BP-207ENST00000604926 CFAP43Q8NDM7 1665 aa7.96□□□□□ -1.14
COL4A3BP-207ENST00000604926 PTMAP06454 111 aaKnown RBP7.95□□□□□ -1.14
COL4A3BP-207ENST00000604926 GPATCH11Q8N954 259 aa7.95□□□□□ -1.14
COL4A3BP-207ENST00000604926 SETQ01105 290 aaPredicted RBP7.94□□□□□ -1.14
COL4A3BP-207ENST00000604926 DNAJC2Q99543 621 aaKnown RBP7.94□□□□□ -1.14
COL4A3BP-207ENST00000604926 FAM50AQ14320 339 aaKnown RBP7.93□□□□□ -1.14
COL4A3BP-207ENST00000604926 KDM5BQ9UGL1 1544 aa7.92□□□□□ -1.14
COL4A3BP-207ENST00000604926 OSCARQ8IYS5 282 aa7.92□□□□□ -1.14
COL4A3BP-207ENST00000604926 REREQ9P2R6 1566 aa7.92□□□□□ -1.14
COL4A3BP-207ENST00000604926 ADAMTSL3P82987 1691 aa7.92□□□□□ -1.14
COL4A3BP-207ENST00000604926 FAM9BQ8IZU0 186 aa7.91□□□□□ -1.14
COL4A3BP-207ENST00000604926 SYNJ2O15056 1496 aa7.91□□□□□ -1.14
COL4A3BP-207ENST00000604926 CNGB1Q14028 1251 aaPredicted RBP7.91□□□□□ -1.14
COL4A3BP-207ENST00000604926 ZNF608Q9ULD9 1512 aaPredicted RBP7.91□□□□□ -1.14
COL4A3BP-207ENST00000604926 ABCC10Q5T3U5 1492 aa7.91□□□□□ -1.14
COL4A3BP-207ENST00000604926 MAFGO15525 162 aa7.9□□□□□ -1.14
COL4A3BP-207ENST00000604926 RTL5Q5HYW3 569 aaPredicted RBP7.9□□□□□ -1.14
COL4A3BP-207ENST00000604926 PLCD3Q8N3E9 789 aa7.9□□□□□ -1.14
COL4A3BP-207ENST00000604926 BCORL1Q5H9F3 1711 aa7.89□□□□□ -1.15
COL4A3BP-207ENST00000604926 NEFMP07197 916 aa7.89□□□□□ -1.15
COL4A3BP-207ENST00000604926 FAM135AQ9P2D6 1515 aa7.89□□□□□ -1.15
COL4A3BP-207ENST00000604926 SOX12O15370 315 aa7.88□□□□□ -1.15
COL4A3BP-207ENST00000604926 CFAP74Q9C0B2 1584 aa7.86□□□□□ -1.15
COL4A3BP-207ENST00000604926 PLEKHD1A6NEE1 506 aa7.86□□□□□ -1.15
COL4A3BP-207ENST00000604926 TMTC2Q8N394 836 aa7.85□□□□□ -1.15
COL4A3BP-207ENST00000604926 SGSM3Q96HU1 749 aa7.85□□□□□ -1.15
COL4A3BP-207ENST00000604926 AEBP1Q8IUX7 1158 aa7.84□□□□□ -1.15
COL4A3BP-207ENST00000604926 LAS1LQ9Y4W2 734 aaKnown RBP7.84□□□□□ -1.15
COL4A3BP-207ENST00000604926 CLGNO14967 610 aa7.83□□□□□ -1.16
COL4A3BP-207ENST00000604926 FOXD4L6Q3SYB3 417 aaPredicted RBP7.83□□□□□ -1.16
COL4A3BP-207ENST00000604926 FOXD4L3Q6VB84 417 aaPredicted RBP7.83□□□□□ -1.16
COL4A3BP-207ENST00000604926 ZNF830Q96NB3 372 aaPredicted RBP7.83□□□□□ -1.16
COL4A3BP-207ENST00000604926 CDCA8Q53HL2 280 aa7.82□□□□□ -1.16
COL4A3BP-207ENST00000604926 APBB1O00213 710 aa7.82□□□□□ -1.16
COL4A3BP-207ENST00000604926 MFAP1P55081 439 aaKnown RBP7.82□□□□□ -1.16
COL4A3BP-207ENST00000604926 CEP170Q5SW79 1584 aa7.82□□□□□ -1.16
COL4A3BP-207ENST00000604926 PRDM4Q9UKN5 801 aa7.82□□□□□ -1.16
COL4A3BP-207ENST00000604926 CTTNBP2Q8WZ74 1663 aa7.81□□□□□ -1.16
COL4A3BP-207ENST00000604926 GRIN2BQ13224 1484 aa7.81□□□□□ -1.16
COL4A3BP-207ENST00000604926 ARAP3Q8WWN8 1544 aa7.81□□□□□ -1.16
COL4A3BP-207ENST00000604926 MROH2AA6NES4 1674 aa7.81□□□□□ -1.16
COL4A3BP-207ENST00000604926 PHF14O94880 888 aa7.8□□□□□ -1.16
COL4A3BP-207ENST00000604926 ZNF316A6NFI3 1004 aaPredicted RBP7.8□□□□□ -1.16
COL4A3BP-207ENST00000604926 LOC102724159A0A0B4J2E5 919 aa7.8□□□□□ -1.16
COL4A3BP-207ENST00000604926 BRD1O95696 1058 aa7.8□□□□□ -1.16
COL4A3BP-207ENST00000604926 PWP2Q15269 919 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms