RNA–Protein interactions for RNA: ENST00000604609.2

GDF15-205, Transcript of growth differentiation factor 15, humanhuman

TSL 3

Gene GDF15, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF15-205ENST00000604609 ARHGEF12Q9NZN5 1544 aa15.29■□□□□ 0.04
GDF15-205ENST00000604609 MYOM3Q5VTT5 1437 aa15.29■□□□□ 0.04
GDF15-205ENST00000604609 AKNAQ7Z591 1439 aa15.29■□□□□ 0.04
GDF15-205ENST00000604609 EFCAB2Q5VUJ9 269 aa15.29■□□□□ 0.04
GDF15-205ENST00000604609 RAPGEF3O95398 923 aa15.28■□□□□ 0.04
GDF15-205ENST00000604609 PREX2Q70Z35 1606 aa15.27■□□□□ 0.03
GDF15-205ENST00000604609 TEX14Q8IWB6 1497 aa15.27■□□□□ 0.03
GDF15-205ENST00000604609 HNRNPMP52272 730 aaKnown RBP eCLIP15.26■□□□□ 0.03
GDF15-205ENST00000604609 ADGRL1O94910 1474 aa15.26■□□□□ 0.03
GDF15-205ENST00000604609 NEO1Q92859 1461 aa15.26■□□□□ 0.03
GDF15-205ENST00000604609 SCAPERQ9BY12 1400 aa15.26■□□□□ 0.03
GDF15-205ENST00000604609 SAMD9LQ8IVG5 1584 aa15.25■□□□□ 0.03
GDF15-205ENST00000604609 CDC42BPAQ5VT25 1732 aa15.25■□□□□ 0.03
GDF15-205ENST00000604609 FGD6Q6ZV73 1430 aa15.25■□□□□ 0.03
GDF15-205ENST00000604609 TRAPPC8Q9Y2L5 1435 aa15.25■□□□□ 0.03
GDF15-205ENST00000604609 ARAP3Q8WWN8 1544 aa15.24■□□□□ 0.03
GDF15-205ENST00000604609 CDC42BPBQ9Y5S2 1711 aa15.24■□□□□ 0.03
GDF15-205ENST00000604609 AFAP1Q8N556 730 aa15.24■□□□□ 0.03
GDF15-205ENST00000604609 MYO5CQ9NQX4 1742 aa15.23■□□□□ 0.03
GDF15-205ENST00000604609 CAMSAP2Q08AD1 1489 aa15.23■□□□□ 0.03
GDF15-205ENST00000604609 ABCC1P33527 1531 aa15.22■□□□□ 0.03
GDF15-205ENST00000604609 SYCP2Q9BX26 1530 aa15.22■□□□□ 0.03
GDF15-205ENST00000604609 FAM50AQ14320 339 aaKnown RBP15.21■□□□□ 0.03
GDF15-205ENST00000604609 MBD5Q9P267 1494 aa15.2■□□□□ 0.02
GDF15-205ENST00000604609 DENND4BO75064 1496 aaPredicted RBP15.2■□□□□ 0.02
GDF15-205ENST00000604609 FRMPD1Q5SYB0 1578 aa15.19■□□□□ 0.02
GDF15-205ENST00000604609 POGZQ7Z3K3 1410 aa15.19■□□□□ 0.02
GDF15-205ENST00000604609 MIA2Q96PC5 1412 aa15.19■□□□□ 0.02
GDF15-205ENST00000604609 KDM6BO15054 1643 aa15.17■□□□□ 0.02
GDF15-205ENST00000604609 TCOF1Q13428 1488 aaKnown RBP15.17■□□□□ 0.02
GDF15-205ENST00000604609 KIAA1107Q9UPP5 1409 aa15.17■□□□□ 0.02
GDF15-205ENST00000604609 PTPN23Q9H3S7 1636 aa15.16■□□□□ 0.02
GDF15-205ENST00000604609 YEATS2Q9ULM3 1422 aa15.16■□□□□ 0.02
GDF15-205ENST00000604609 ITSN2Q9NZM3 1697 aa15.16■□□□□ 0.02
GDF15-205ENST00000604609 ITGAEP38570 1179 aa15.15■□□□□ 0.02
GDF15-205ENST00000604609 ABCC5O15440 1437 aa15.15■□□□□ 0.02
GDF15-205ENST00000604609 PTPRKQ15262 1439 aa15.15■□□□□ 0.02
GDF15-205ENST00000604609 RRBP1Q9P2E9 1410 aaKnown RBP15.15■□□□□ 0.02
GDF15-205ENST00000604609 CFAP74Q9C0B2 1584 aa15.14■□□□□ 0.01
GDF15-205ENST00000604609 PLEKHH2Q8IVE3 1493 aa15.13■□□□□ 0.01
GDF15-205ENST00000604609 CHIC2Q9UKJ5 165 aa15.12■□□□□ 0.01
GDF15-205ENST00000604609 ZNF518AQ6AHZ1 1483 aa15.11■□□□□ 0.01
GDF15-205ENST00000604609 CCDC141Q6ZP82 1450 aa15.11■□□□□ 0.01
GDF15-205ENST00000604609 DAPK1P53355 1430 aa15.1■□□□□ 0.01
GDF15-205ENST00000604609 AEBP2Q6ZN18 517 aaPredicted RBP15.1■□□□□ 0.01
GDF15-205ENST00000604609 SPAG9O60271 1321 aaKnown RBP15.1■□□□□ 0.01
GDF15-205ENST00000604609 MYT1LQ9UL68 1186 aa15.09■□□□□ 0.01
GDF15-205ENST00000604609 KDM5CP41229 1560 aa15.09■□□□□ 0.01
GDF15-205ENST00000604609 RICTORQ6R327 1708 aa15.09■□□□□ 0.01
GDF15-205ENST00000604609 C9orf84Q5VXU9 1444 aa15.08■□□□□ 0
GDF15-205ENST00000604609 ZMYM4Q5VZL5 1548 aa15.07■□□□□ 0
GDF15-205ENST00000604609 ARHGEF5Q12774 1597 aa15.07■□□□□ 0
GDF15-205ENST00000604609 ZFYVE16Q7Z3T8 1539 aa15.06■□□□□ 0
GDF15-205ENST00000604609 MLH3Q9UHC1 1453 aa15.05■□□□□ -0
GDF15-205ENST00000604609 RRP7BPQ9NSQ0 103 aa15.04■□□□□ -0
GDF15-205ENST00000604609 DNMT1P26358 1616 aaKnown RBP15.03■□□□□ -0
GDF15-205ENST00000604609 ATP7AQ04656 1500 aa15.03■□□□□ -0
GDF15-205ENST00000604609 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.03■□□□□ -0
GDF15-205ENST00000604609 TSPY4P0CV99 314 aa15.03■□□□□ -0
GDF15-205ENST00000604609 TSPY10P0CW01 314 aa15.03■□□□□ -0
GDF15-205ENST00000604609 ABCA6Q8N139 1617 aa15.03■□□□□ -0
GDF15-205ENST00000604609 HECW2Q9P2P5 1572 aa15.02■□□□□ -0
GDF15-205ENST00000604609 INO80Q9ULG1 1556 aaPredicted RBP15.02■□□□□ -0
GDF15-205ENST00000604609 RSPH4AQ5TD94 716 aa15.02■□□□□ -0
GDF15-205ENST00000604609 DIP2CQ9Y2E4 1556 aa15.02□□□□□ -0.01
GDF15-205ENST00000604609 ARHGEF40Q8TER5 1519 aa15.02□□□□□ -0.01
GDF15-205ENST00000604609 SHANK2Q9UPX8 1470 aa15.01□□□□□ -0.01
GDF15-205ENST00000604609 KIDINS220Q9ULH0 1771 aa15.01□□□□□ -0.01
GDF15-205ENST00000604609 MAGI2Q86UL8 1455 aa15□□□□□ -0.01
GDF15-205ENST00000604609 RTEL1-TNFRSF6BF6WH68 1400 aa15□□□□□ -0.01
GDF15-205ENST00000604609 SIGLEC1Q9BZZ2 1709 aa14.99□□□□□ -0.01
GDF15-205ENST00000604609 ATP10AO60312 1499 aa14.99□□□□□ -0.01
GDF15-205ENST00000604609 NCOA1Q15788 1441 aa14.99□□□□□ -0.01
GDF15-205ENST00000604609 KIF15Q9NS87 1388 aa14.98□□□□□ -0.01
GDF15-205ENST00000604609 MAST1Q9Y2H9 1570 aa14.98□□□□□ -0.01
GDF15-205ENST00000604609 MLECQ14165 292 aa14.97□□□□□ -0.01
GDF15-205ENST00000604609 A2MP01023 1474 aa14.96□□□□□ -0.01
GDF15-205ENST00000604609 CROCC2H7BZ55 1655 aa14.96□□□□□ -0.01
GDF15-205ENST00000604609 ANKRD30AQ9BXX3 1397 aa14.96□□□□□ -0.02
GDF15-205ENST00000604609 ADGRL2O95490 1459 aa14.95□□□□□ -0.02
GDF15-205ENST00000604609 ARID4BQ4LE39 1312 aaPredicted RBP14.95□□□□□ -0.02
GDF15-205ENST00000604609 DHX29Q7Z478 1369 aaKnown RBP14.95□□□□□ -0.02
GDF15-205ENST00000604609 ROCK1Q13464 1354 aa14.93□□□□□ -0.02
GDF15-205ENST00000604609 PLXNC1O60486 1568 aa14.91□□□□□ -0.02
GDF15-205ENST00000604609 KIF3BO15066 747 aa14.91□□□□□ -0.02
GDF15-205ENST00000604609 NAIPQ13075 1403 aa14.91□□□□□ -0.02
GDF15-205ENST00000604609 TRIM26Q12899 539 aaPredicted RBP14.9□□□□□ -0.02
GDF15-205ENST00000604609 KDM4FA0A1W2PPD8 638 aa14.89□□□□□ -0.03
GDF15-205ENST00000604609 GGT6Q6P531 493 aa14.89□□□□□ -0.03
GDF15-205ENST00000604609 ADGBQ8N7X0 1667 aa14.89□□□□□ -0.03
GDF15-205ENST00000604609 ANKRD50Q9ULJ7 1429 aa14.89□□□□□ -0.03
GDF15-205ENST00000604609 DUOX2Q9NRD8 1548 aa14.88□□□□□ -0.03
GDF15-205ENST00000604609 REREQ9P2R6 1566 aa14.87□□□□□ -0.03
GDF15-205ENST00000604609 HFM1A2PYH4 1435 aa14.87□□□□□ -0.03
GDF15-205ENST00000604609 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.87□□□□□ -0.032e-13■■■□□ 16.3
GDF15-205ENST00000604609 AGLP35573 1532 aa14.86□□□□□ -0.03
GDF15-205ENST00000604609 ERBINQ96RT1 1412 aa14.85□□□□□ -0.03
GDF15-205ENST00000604609 PCGF6Q9BYE7 350 aa14.84□□□□□ -0.03
GDF15-205ENST00000604609 PLPPR3Q6T4P5 718 aa14.83□□□□□ -0.04
GDF15-205ENST00000604609 MROH1Q8NDA8 1641 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms