RNA–Protein interactions for RNA: ENST00000603731.1

HERPUD2-207, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-207ENST00000603731 SOCS7O14512 581 aa19.18■□□□□ 0.66
HERPUD2-207ENST00000603731 ILDR2Q71H61 639 aa19.18■□□□□ 0.66
HERPUD2-207ENST00000603731 FGD6Q6ZV73 1430 aa19.17■□□□□ 0.66
HERPUD2-207ENST00000603731 FAM50AQ14320 339 aaKnown RBP19.16■□□□□ 0.66
HERPUD2-207ENST00000603731 ITSN2Q9NZM3 1697 aa19.16■□□□□ 0.66
HERPUD2-207ENST00000603731 PTPN23Q9H3S7 1636 aa19.13■□□□□ 0.65
HERPUD2-207ENST00000603731 MIA2Q96PC5 1412 aa19.11■□□□□ 0.65
HERPUD2-207ENST00000603731 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.11■□□□□ 0.65
HERPUD2-207ENST00000603731 CDC42BPAQ5VT25 1732 aa19.08■□□□□ 0.65
HERPUD2-207ENST00000603731 ITGAEP38570 1179 aa19.08■□□□□ 0.64
HERPUD2-207ENST00000603731 DISP3Q9P2K9 1392 aa19.07■□□□□ 0.64
HERPUD2-207ENST00000603731 TCOF1Q13428 1488 aaKnown RBP19.06■□□□□ 0.64
HERPUD2-207ENST00000603731 KCNH8Q96L42 1107 aa19.06■□□□□ 0.64
HERPUD2-207ENST00000603731 GPATCH8Q9UKJ3 1502 aaKnown RBP19.05■□□□□ 0.64
HERPUD2-207ENST00000603731 WDR7Q9Y4E6 1490 aa19.04■□□□□ 0.64
HERPUD2-207ENST00000603731 CFDP1Q9UEE9 299 aaPredicted RBP19.04■□□□□ 0.64
HERPUD2-207ENST00000603731 PTPRMP28827 1452 aa19.03■□□□□ 0.64
HERPUD2-207ENST00000603731 MYO5CQ9NQX4 1742 aa19.03■□□□□ 0.64
HERPUD2-207ENST00000603731 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.03■□□□□ 0.64
HERPUD2-207ENST00000603731 PREX2Q70Z35 1606 aa19.01■□□□□ 0.63
HERPUD2-207ENST00000603731 TTC37Q6PGP7 1564 aa19.01■□□□□ 0.63
HERPUD2-207ENST00000603731 ADAMTSL3P82987 1691 aa19■□□□□ 0.63
HERPUD2-207ENST00000603731 CDC42BPBQ9Y5S2 1711 aa19■□□□□ 0.63
HERPUD2-207ENST00000603731 ZNF777Q9ULD5 760 aaPredicted RBP18.99■□□□□ 0.63
HERPUD2-207ENST00000603731 CAMSAP2Q08AD1 1489 aa18.97■□□□□ 0.63
HERPUD2-207ENST00000603731 ARHGAP5Q13017 1502 aa18.95■□□□□ 0.62
HERPUD2-207ENST00000603731 ZNF644Q9H582 1327 aaPredicted RBP18.94■□□□□ 0.62
HERPUD2-207ENST00000603731 DNMT1P26358 1616 aaKnown RBP18.93■□□□□ 0.62
HERPUD2-207ENST00000603731 ABCA9Q8IUA7 1624 aa18.93■□□□□ 0.62
HERPUD2-207ENST00000603731 CERKQ8TCT0 537 aa18.93■□□□□ 0.62
HERPUD2-207ENST00000603731 CD109Q6YHK3 1445 aa18.91■□□□□ 0.62
HERPUD2-207ENST00000603731 PLCH2O75038 1416 aa18.91■□□□□ 0.62
HERPUD2-207ENST00000603731 DAPK1P53355 1430 aa18.9■□□□□ 0.62
HERPUD2-207ENST00000603731 SAMD9LQ8IVG5 1584 aa18.89■□□□□ 0.62
HERPUD2-207ENST00000603731 SPATA31D1Q6ZQQ2 1576 aa18.89■□□□□ 0.61
HERPUD2-207ENST00000603731 EFCAB2Q5VUJ9 269 aa18.88■□□□□ 0.61
HERPUD2-207ENST00000603731 PTPRKQ15262 1439 aa18.88■□□□□ 0.61
HERPUD2-207ENST00000603731 SETD5Q9C0A6 1442 aa18.88■□□□□ 0.61
HERPUD2-207ENST00000603731 ARAP3Q8WWN8 1544 aa18.88■□□□□ 0.61
HERPUD2-207ENST00000603731 MADDQ8WXG6 1647 aa18.88■□□□□ 0.61
HERPUD2-207ENST00000603731 CROCC2H7BZ55 1655 aa18.88■□□□□ 0.61
HERPUD2-207ENST00000603731 PLEKHH2Q8IVE3 1493 aa18.87■□□□□ 0.61
HERPUD2-207ENST00000603731 ABCC5O15440 1437 aa18.86■□□□□ 0.61
HERPUD2-207ENST00000603731 CCER1Q8TC90 406 aaPredicted RBP18.86■□□□□ 0.61
HERPUD2-207ENST00000603731 BCORL1Q5H9F3 1711 aa18.86■□□□□ 0.61
HERPUD2-207ENST00000603731 ADGBQ8N7X0 1667 aa18.85■□□□□ 0.61
HERPUD2-207ENST00000603731 HSPA2P54652 639 aa18.85■□□□□ 0.61
HERPUD2-207ENST00000603731 CHIC2Q9UKJ5 165 aa18.85■□□□□ 0.61
HERPUD2-207ENST00000603731 ARHGEF5Q12774 1597 aa18.85■□□□□ 0.61
HERPUD2-207ENST00000603731 RSPH4AQ5TD94 716 aa18.83■□□□□ 0.6
HERPUD2-207ENST00000603731 GCC2Q8IWJ2 1684 aa18.82■□□□□ 0.6
HERPUD2-207ENST00000603731 RAB3GAP2Q9H2M9 1393 aa18.82■□□□□ 0.6
HERPUD2-207ENST00000603731 HNRNPMP52272 730 aaKnown RBP eCLIP18.82■□□□□ 0.6
HERPUD2-207ENST00000603731 SYCP2Q9BX26 1530 aa18.81■□□□□ 0.6
HERPUD2-207ENST00000603731 HFM1A2PYH4 1435 aa18.81■□□□□ 0.6
HERPUD2-207ENST00000603731 AKNAQ7Z591 1439 aa18.81■□□□□ 0.6
HERPUD2-207ENST00000603731 KIAA1107Q9UPP5 1409 aa18.81■□□□□ 0.6
HERPUD2-207ENST00000603731 CFAP74Q9C0B2 1584 aa18.81■□□□□ 0.6
HERPUD2-207ENST00000603731 FANCAO15360 1455 aa18.8■□□□□ 0.6
HERPUD2-207ENST00000603731 CCDC141Q6ZP82 1450 aa18.8■□□□□ 0.6
HERPUD2-207ENST00000603731 TSPY4P0CV99 314 aa18.8■□□□□ 0.6
HERPUD2-207ENST00000603731 TSPY10P0CW01 314 aa18.8■□□□□ 0.6
HERPUD2-207ENST00000603731 RRP7BPQ9NSQ0 103 aa18.8■□□□□ 0.6
HERPUD2-207ENST00000603731 ROCK1Q13464 1354 aa18.8■□□□□ 0.6
HERPUD2-207ENST00000603731 ABCC1P33527 1531 aa18.79■□□□□ 0.6
HERPUD2-207ENST00000603731 RIMS1Q86UR5 1692 aaKnown RBP18.79■□□□□ 0.6
HERPUD2-207ENST00000603731 MBD5Q9P267 1494 aa18.78■□□□□ 0.6
HERPUD2-207ENST00000603731 SHANK2Q9UPX8 1470 aa18.78■□□□□ 0.6
HERPUD2-207ENST00000603731 HRCP23327 699 aa18.78■□□□□ 0.6
HERPUD2-207ENST00000603731 NAIPQ13075 1403 aa18.77■□□□□ 0.6
HERPUD2-207ENST00000603731 ANKRD30AQ9BXX3 1397 aa18.76■□□□□ 0.59
HERPUD2-207ENST00000603731 C9orf84Q5VXU9 1444 aa18.75■□□□□ 0.59
HERPUD2-207ENST00000603731 ZEB1P37275 1124 aaPredicted RBP18.75■□□□□ 0.59
HERPUD2-207ENST00000603731 ADGRL2O95490 1459 aa18.75■□□□□ 0.59
HERPUD2-207ENST00000603731 MAST1Q9Y2H9 1570 aa18.73■□□□□ 0.59
HERPUD2-207ENST00000603731 ARID4BQ4LE39 1312 aaPredicted RBP18.73■□□□□ 0.59
HERPUD2-207ENST00000603731 ARHGEF12Q9NZN5 1544 aa18.72■□□□□ 0.59
HERPUD2-207ENST00000603731 NCOA1Q15788 1441 aa18.72■□□□□ 0.59
HERPUD2-207ENST00000603731 RAPGEF3O95398 923 aa18.7■□□□□ 0.58
HERPUD2-207ENST00000603731 ACIN1Q9UKV3 1341 aaKnown RBP18.7■□□□□ 0.58
HERPUD2-207ENST00000603731 DHX57Q6P158 1386 aaKnown RBP18.69■□□□□ 0.58
HERPUD2-207ENST00000603731 SCAPERQ9BY12 1400 aa18.69■□□□□ 0.58
HERPUD2-207ENST00000603731 TRAPPC8Q9Y2L5 1435 aa18.68■□□□□ 0.58
HERPUD2-207ENST00000603731 PLPPR3Q6T4P5 718 aa18.68■□□□□ 0.58
HERPUD2-207ENST00000603731 NEO1Q92859 1461 aa18.68■□□□□ 0.58
HERPUD2-207ENST00000603731 FRMPD1Q5SYB0 1578 aa18.68■□□□□ 0.58
HERPUD2-207ENST00000603731 PLXNC1O60486 1568 aa18.64■□□□□ 0.58
HERPUD2-207ENST00000603731 TRIM52Q96A61 297 aa18.64■□□□□ 0.57
HERPUD2-207ENST00000603731 SPAG9O60271 1321 aaKnown RBP18.64■□□□□ 0.57
HERPUD2-207ENST00000603731 KIF15Q9NS87 1388 aa18.64■□□□□ 0.57
HERPUD2-207ENST00000603731 MYT1LQ9UL68 1186 aa18.63■□□□□ 0.57
HERPUD2-207ENST00000603731 CLSPNQ9HAW4 1339 aa18.63■□□□□ 0.57
HERPUD2-207ENST00000603731 AFAP1Q8N556 730 aa18.62■□□□□ 0.57
HERPUD2-207ENST00000603731 RTEL1-TNFRSF6BF6WH68 1400 aa18.62■□□□□ 0.57
HERPUD2-207ENST00000603731 ANKRD50Q9ULJ7 1429 aa18.62■□□□□ 0.57
HERPUD2-207ENST00000603731 ARHGEF40Q8TER5 1519 aa18.62■□□□□ 0.57
HERPUD2-207ENST00000603731 ZNF518AQ6AHZ1 1483 aa18.61■□□□□ 0.57
HERPUD2-207ENST00000603731 INO80Q9ULG1 1556 aaPredicted RBP18.59■□□□□ 0.57
HERPUD2-207ENST00000603731 ATP7AQ04656 1500 aa18.59■□□□□ 0.57
HERPUD2-207ENST00000603731 ZFYVE16Q7Z3T8 1539 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms