RNA–Protein interactions for RNA: ENST00000603679.1

VCAM1-205, Transcript of vascular cell adhesion molecule 1, humanhuman

Gene VCAM1, Length 3,865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-205ENST00000603679 ZBTB22O15209 634 aa5.41□□□□□ -1.54
VCAM1-205ENST00000603679 CDC42BPBQ9Y5S2 1711 aa5.41□□□□□ -1.54
VCAM1-205ENST00000603679 NPM3O75607 178 aaKnown RBP5.41□□□□□ -1.54
VCAM1-205ENST00000603679 KIF14Q15058 1648 aa5.41□□□□□ -1.54
VCAM1-205ENST00000603679 CARMIL2Q6F5E8 1435 aa5.41□□□□□ -1.54
VCAM1-205ENST00000603679 SPATA31D1Q6ZQQ2 1576 aa5.4□□□□□ -1.54
VCAM1-205ENST00000603679 PLA2R1Q13018 1463 aa5.4□□□□□ -1.54
VCAM1-205ENST00000603679 KIF27Q86VH2 1401 aa5.4□□□□□ -1.55
VCAM1-205ENST00000603679 SETD1BQ9UPS6 1966 aaKnown RBP5.4□□□□□ -1.55
VCAM1-205ENST00000603679 DIP2CQ9Y2E4 1556 aa5.39□□□□□ -1.55
VCAM1-205ENST00000603679 MYO3AQ8NEV4 1616 aa5.39□□□□□ -1.55
VCAM1-205ENST00000603679 EIF2AK4Q9P2K8 1649 aaKnown RBP5.39□□□□□ -1.55
VCAM1-205ENST00000603679 ALKQ9UM73 1620 aa5.39□□□□□ -1.55
VCAM1-205ENST00000603679 RNF17Q9BXT8 1623 aaKnown RBP5.39□□□□□ -1.55
VCAM1-205ENST00000603679 RAPGEF2Q9Y4G8 1499 aa5.39□□□□□ -1.55
VCAM1-205ENST00000603679 XIRP1Q702N8 1843 aaKnown RBP5.38□□□□□ -1.55
VCAM1-205ENST00000603679 HECW1Q76N89 1606 aa5.38□□□□□ -1.55
VCAM1-205ENST00000603679 NPATQ14207 1427 aa5.38□□□□□ -1.55
VCAM1-205ENST00000603679 KIDINS220Q9ULH0 1771 aa5.37□□□□□ -1.55
VCAM1-205ENST00000603679 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.37□□□□□ -1.55
VCAM1-205ENST00000603679 ABCA6Q8N139 1617 aa5.37□□□□□ -1.55
VCAM1-205ENST00000603679 CDC42BPAQ5VT25 1732 aa5.37□□□□□ -1.55
VCAM1-205ENST00000603679 CYB5RLQ6IPT4 315 aa5.37□□□□□ -1.55
VCAM1-205ENST00000603679 ZFYVE16Q7Z3T8 1539 aa5.37□□□□□ -1.55
VCAM1-205ENST00000603679 MAST1Q9Y2H9 1570 aa5.36□□□□□ -1.55
VCAM1-205ENST00000603679 FANCAO15360 1455 aa5.36□□□□□ -1.55
VCAM1-205ENST00000603679 FOXD4L1Q9NU39 408 aa5.36□□□□□ -1.55
VCAM1-205ENST00000603679 MLH3Q9UHC1 1453 aa5.36□□□□□ -1.55
VCAM1-205ENST00000603679 FBXO41Q8TF61 875 aa5.35□□□□□ -1.55
VCAM1-205ENST00000603679 KDM5DQ9BY66 1539 aa5.35□□□□□ -1.55
VCAM1-205ENST00000603679 ABCC1P33527 1531 aa5.35□□□□□ -1.55
VCAM1-205ENST00000603679 PTPN23Q9H3S7 1636 aa5.34□□□□□ -1.55
VCAM1-205ENST00000603679 TCOF1Q13428 1488 aaKnown RBP5.34□□□□□ -1.55
VCAM1-205ENST00000603679 CHMP7Q8WUX9 453 aaPredicted RBP5.34□□□□□ -1.55
VCAM1-205ENST00000603679 NWD1Q149M9 1564 aa5.34□□□□□ -1.55
VCAM1-205ENST00000603679 NEURL4Q96JN8 1562 aa5.34□□□□□ -1.55
VCAM1-205ENST00000603679 MED14O60244 1454 aa5.33□□□□□ -1.56
VCAM1-205ENST00000603679 SUPT6HQ7KZ85 1726 aaKnown RBP5.33□□□□□ -1.56
VCAM1-205ENST00000603679 PTPRGP23470 1445 aa5.33□□□□□ -1.56
VCAM1-205ENST00000603679 ATP10BO94823 1461 aa5.32□□□□□ -1.56
VCAM1-205ENST00000603679 JPH4Q96JJ6 628 aa5.32□□□□□ -1.56
VCAM1-205ENST00000603679 CPS1P31327 1500 aa5.32□□□□□ -1.56
VCAM1-205ENST00000603679 POGZQ7Z3K3 1410 aa5.32□□□□□ -1.56
VCAM1-205ENST00000603679 NUP153P49790 1475 aaKnown RBP5.32□□□□□ -1.56
VCAM1-205ENST00000603679 VWDEQ8N2E2 1590 aa5.31□□□□□ -1.56
VCAM1-205ENST00000603679 SETD1AO15047 1707 aaKnown RBP5.3□□□□□ -1.56
VCAM1-205ENST00000603679 EEA1Q15075 1411 aa5.3□□□□□ -1.56
VCAM1-205ENST00000603679 CROCC2H7BZ55 1655 aa5.3□□□□□ -1.56
VCAM1-205ENST00000603679 C9orf84Q5VXU9 1444 aa5.3□□□□□ -1.56
VCAM1-205ENST00000603679 STRCP1A6NGW2 1772 aa5.29□□□□□ -1.56
VCAM1-205ENST00000603679 CD109Q6YHK3 1445 aa5.29□□□□□ -1.56
VCAM1-205ENST00000603679 CNKSR2Q8WXI2 1034 aa5.29□□□□□ -1.56
VCAM1-205ENST00000603679 CNTLNQ9NXG0 1405 aa5.28□□□□□ -1.56
VCAM1-205ENST00000603679 ARHGEF5Q12774 1597 aa5.28□□□□□ -1.56
VCAM1-205ENST00000603679 NCOA1Q15788 1441 aa5.28□□□□□ -1.56
VCAM1-205ENST00000603679 BCANQ96GW7 911 aa5.28□□□□□ -1.56
VCAM1-205ENST00000603679 SHPRHQ149N8 1683 aa5.28□□□□□ -1.56
VCAM1-205ENST00000603679 NCOA2Q15596 1464 aa5.28□□□□□ -1.56
VCAM1-205ENST00000603679 ILDR1Q86SU0 546 aaPredicted RBP5.27□□□□□ -1.57
VCAM1-205ENST00000603679 ATP10AO60312 1499 aa5.27□□□□□ -1.57
VCAM1-205ENST00000603679 CARMIL1Q5VZK9 1371 aa5.27□□□□□ -1.57
VCAM1-205ENST00000603679 UGGT1Q9NYU2 1555 aa5.27□□□□□ -1.57
VCAM1-205ENST00000603679 CEP170BQ9Y4F5 1589 aaPredicted RBP5.27□□□□□ -1.57
VCAM1-205ENST00000603679 MSH5O43196 834 aa5.27□□□□□ -1.57
VCAM1-205ENST00000603679 DNMT1P26358 1616 aaKnown RBP5.27□□□□□ -1.57
VCAM1-205ENST00000603679 SPHKAPQ2M3C7 1700 aa5.26□□□□□ -1.57
VCAM1-205ENST00000603679 MED1Q15648 1581 aaPredicted RBP5.26□□□□□ -1.57
VCAM1-205ENST00000603679 PLCH2O75038 1416 aa5.25□□□□□ -1.57
VCAM1-205ENST00000603679 AKNAQ7Z591 1439 aa5.25□□□□□ -1.57
VCAM1-205ENST00000603679 UBR1Q8IWV7 1749 aa5.25□□□□□ -1.57
VCAM1-205ENST00000603679 SAMD9LQ8IVG5 1584 aa5.25□□□□□ -1.57
VCAM1-205ENST00000603679 ZNF518AQ6AHZ1 1483 aa5.25□□□□□ -1.57
VCAM1-205ENST00000603679 PRAG1Q86YV5 1406 aa5.25□□□□□ -1.57
VCAM1-205ENST00000603679 MROH1Q8NDA8 1641 aa5.25□□□□□ -1.57
VCAM1-205ENST00000603679 IQGAP1P46940 1657 aa5.24□□□□□ -1.57
VCAM1-205ENST00000603679 DENND4BO75064 1496 aaPredicted RBP5.24□□□□□ -1.57
VCAM1-205ENST00000603679 PLCB2Q00722 1185 aa5.24□□□□□ -1.57
VCAM1-205ENST00000603679 YEATS2Q9ULM3 1422 aa5.23□□□□□ -1.57
VCAM1-205ENST00000603679 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.23□□□□□ -1.57
VCAM1-205ENST00000603679 FKBP8Q14318 412 aa5.23□□□□□ -1.57
VCAM1-205ENST00000603679 PIAS4Q8N2W9 510 aaPredicted RBP5.23□□□□□ -1.57
VCAM1-205ENST00000603679 CLTCQ00610 1675 aaKnown RBP5.23□□□□□ -1.57
VCAM1-205ENST00000603679 SLIT1O75093 1534 aa5.23□□□□□ -1.57
VCAM1-205ENST00000603679 LMTK2Q8IWU2 1503 aa5.23□□□□□ -1.57
VCAM1-205ENST00000603679 ATXN8OSP0DMR3 200 aa5.23□□□□□ -1.57
VCAM1-205ENST00000603679 PIK3C2BO00750 1634 aa5.22□□□□□ -1.57
VCAM1-205ENST00000603679 LRP5O75197 1615 aa5.22□□□□□ -1.57
VCAM1-205ENST00000603679 IQGAP3Q86VI3 1631 aa5.22□□□□□ -1.57
VCAM1-205ENST00000603679 CCDC18Q5T9S5 1454 aa5.22□□□□□ -1.57
VCAM1-205ENST00000603679 KIAA1107Q9UPP5 1409 aa5.22□□□□□ -1.57
VCAM1-205ENST00000603679 MARF1Q9Y4F3 1742 aaKnown RBP5.22□□□□□ -1.57
VCAM1-205ENST00000603679 DAXXQ9UER7 740 aaPredicted RBP5.22□□□□□ -1.57
VCAM1-205ENST00000603679 ABCC3O15438 1527 aa5.21□□□□□ -1.57
VCAM1-205ENST00000603679 MAP3K1Q13233 1512 aa5.21□□□□□ -1.57
VCAM1-205ENST00000603679 COL22A1Q8NFW1 1626 aaPredicted RBP5.21□□□□□ -1.58
VCAM1-205ENST00000603679 RTEL1-TNFRSF6BF6WH68 1400 aa5.21□□□□□ -1.58
VCAM1-205ENST00000603679 CDK13Q14004 1512 aaKnown RBP5.2□□□□□ -1.58
VCAM1-205ENST00000603679 DIP2AQ14689 1571 aa5.2□□□□□ -1.58
VCAM1-205ENST00000603679 FAM69CQ0P6D2 419 aa5.2□□□□□ -1.58
VCAM1-205ENST00000603679 ARHGAP23Q9P227 1491 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms