RNA–Protein interactions for RNA: ENST00000602495.1

XIST-208, X inactive specific transcript, humanhuman

TSL 4

Gene XIST, Length 827 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-208ENST00000602495 HECW2Q9P2P5 1572 aa12.07□□□□□ -0.48
XIST-208ENST00000602495 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.06□□□□□ -0.48
XIST-208ENST00000602495 FANCAO15360 1455 aa12.06□□□□□ -0.48
XIST-208ENST00000602495 PTPRMP28827 1452 aa12.06□□□□□ -0.48
XIST-208ENST00000602495 PLCH2O75038 1416 aa12.05□□□□□ -0.48
XIST-208ENST00000602495 FOXD4L1Q9NU39 408 aa12.05□□□□□ -0.48
XIST-208ENST00000602495 FMN1Q68DA7 1419 aa12.04□□□□□ -0.48
XIST-208ENST00000602495 ARHGAP35Q9NRY4 1499 aa12.04□□□□□ -0.48
XIST-208ENST00000602495 SCAPERQ9BY12 1400 aa12.03□□□□□ -0.48
XIST-208ENST00000602495 CDK13Q14004 1512 aaKnown RBP12.03□□□□□ -0.48
XIST-208ENST00000602495 ADAMTSL3P82987 1691 aa12.03□□□□□ -0.48
XIST-208ENST00000602495 FRMPD1Q5SYB0 1578 aa12.02□□□□□ -0.49
XIST-208ENST00000602495 MLECQ14165 292 aa12.02□□□□□ -0.49
XIST-208ENST00000602495 AFAP1Q8N556 730 aa12□□□□□ -0.49
XIST-208ENST00000602495 YEATS2Q9ULM3 1422 aa12□□□□□ -0.49
XIST-208ENST00000602495 MAGI2Q86UL8 1455 aa11.99□□□□□ -0.49
XIST-208ENST00000602495 TTC37Q6PGP7 1564 aa11.98□□□□□ -0.49
XIST-208ENST00000602495 POGZQ7Z3K3 1410 aa11.98□□□□□ -0.49
XIST-208ENST00000602495 BCORL1Q5H9F3 1711 aa11.97□□□□□ -0.49
XIST-208ENST00000602495 RICTORQ6R327 1708 aa11.97□□□□□ -0.49
XIST-208ENST00000602495 TROQ12816 1431 aaPredicted RBP11.97□□□□□ -0.49
XIST-208ENST00000602495 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.97□□□□□ -0.492e-8■□□□□ 11.2
XIST-208ENST00000602495 SLC4A2P04920 1241 aa11.96□□□□□ -0.49
XIST-208ENST00000602495 HSPA2P54652 639 aa11.96□□□□□ -0.49
XIST-208ENST00000602495 RNF39Q9H2S5 420 aa11.96□□□□□ -0.49
XIST-208ENST00000602495 MYT1LQ9UL68 1186 aa11.96□□□□□ -0.49
XIST-208ENST00000602495 ATP10AO60312 1499 aa11.95□□□□□ -0.5
XIST-208ENST00000602495 CFAP74Q9C0B2 1584 aa11.95□□□□□ -0.5
XIST-208ENST00000602495 HECW1Q76N89 1606 aa11.94□□□□□ -0.5
XIST-208ENST00000602495 MADDQ8WXG6 1647 aa11.94□□□□□ -0.5
XIST-208ENST00000602495 CEBPAP49715 358 aaPredicted RBP11.94□□□□□ -0.5
XIST-208ENST00000602495 FBXO41Q8TF61 875 aa11.94□□□□□ -0.5
XIST-208ENST00000602495 ZMYM4Q5VZL5 1548 aa11.94□□□□□ -0.5
XIST-208ENST00000602495 ZFYVE16Q7Z3T8 1539 aa11.94□□□□□ -0.5
XIST-208ENST00000602495 CLIP1P30622 1438 aa11.94□□□□□ -0.5
XIST-208ENST00000602495 ARHGEF40Q8TER5 1519 aa11.93□□□□□ -0.5
XIST-208ENST00000602495 CASKIN1Q8WXD9 1431 aa11.93□□□□□ -0.5
XIST-208ENST00000602495 LMTK3Q96Q04 1460 aa11.91□□□□□ -0.5
XIST-208ENST00000602495 CACNB1Q02641 598 aaPredicted RBP11.9□□□□□ -0.5
XIST-208ENST00000602495 KIF14Q15058 1648 aa11.89□□□□□ -0.51
XIST-208ENST00000602495 PCF11O94913 1555 aaKnown RBP11.89□□□□□ -0.51
XIST-208ENST00000602495 C9orf84Q5VXU9 1444 aa11.89□□□□□ -0.51
XIST-208ENST00000602495 ARHGAP5Q13017 1502 aa11.89□□□□□ -0.51
XIST-208ENST00000602495 ZNF518AQ6AHZ1 1483 aa11.89□□□□□ -0.51
XIST-208ENST00000602495 RIMS1Q86UR5 1692 aaKnown RBP11.88□□□□□ -0.51
XIST-208ENST00000602495 ZNF777Q9ULD5 760 aaPredicted RBP11.88□□□□□ -0.51
XIST-208ENST00000602495 SIGLEC1Q9BZZ2 1709 aa11.88□□□□□ -0.51
XIST-208ENST00000602495 TRAPPC8Q9Y2L5 1435 aa11.87□□□□□ -0.51
XIST-208ENST00000602495 HNRNPMP52272 730 aaKnown RBP eCLIP11.87□□□□□ -0.51
XIST-208ENST00000602495 ARHGEF12Q9NZN5 1544 aa11.86□□□□□ -0.51
XIST-208ENST00000602495 MYO5CQ9NQX4 1742 aa11.86□□□□□ -0.51
XIST-208ENST00000602495 MLH3Q9UHC1 1453 aa11.86□□□□□ -0.51
XIST-208ENST00000602495 CCDC18Q5T9S5 1454 aa11.85□□□□□ -0.51
XIST-208ENST00000602495 ESF1Q9H501 851 aaKnown RBP11.85□□□□□ -0.51
XIST-208ENST00000602495 LRRIQ1Q96JM4 1722 aa11.84□□□□□ -0.51
XIST-208ENST00000602495 CERKQ8TCT0 537 aa11.83□□□□□ -0.52
XIST-208ENST00000602495 CFDP1Q9UEE9 299 aaPredicted RBP11.83□□□□□ -0.52
XIST-208ENST00000602495 U3KPZ7 1027 aaPredicted RBP11.83□□□□□ -0.52
XIST-208ENST00000602495 KDM5CP41229 1560 aa11.83□□□□□ -0.52
XIST-208ENST00000602495 CDC42BPBQ9Y5S2 1711 aa11.83□□□□□ -0.52
XIST-208ENST00000602495 GPATCH8Q9UKJ3 1502 aaKnown RBP11.82□□□□□ -0.52
XIST-208ENST00000602495 SPAG9O60271 1321 aaKnown RBP11.82□□□□□ -0.52
XIST-208ENST00000602495 FYCO1Q9BQS8 1478 aa11.81□□□□□ -0.52
XIST-208ENST00000602495 SETD1BQ9UPS6 1966 aaKnown RBP11.8□□□□□ -0.52
XIST-208ENST00000602495 C1QBPQ07021 282 aaKnown RBP11.8□□□□□ -0.52
XIST-208ENST00000602495 AGLP35573 1532 aa11.79□□□□□ -0.52
XIST-208ENST00000602495 FER1L4A9Z1Z3 1794 aa11.79□□□□□ -0.52
XIST-208ENST00000602495 DIP2CQ9Y2E4 1556 aa11.79□□□□□ -0.52
XIST-208ENST00000602495 CCNB3Q8WWL7 1395 aa11.79□□□□□ -0.52
XIST-208ENST00000602495 KIAA1107Q9UPP5 1409 aa11.78□□□□□ -0.52
XIST-208ENST00000602495 REREQ9P2R6 1566 aa11.78□□□□□ -0.52
XIST-208ENST00000602495 ZNF644Q9H582 1327 aaPredicted RBP11.78□□□□□ -0.52
XIST-208ENST00000602495 MTUS2Q5JR59 1369 aa11.78□□□□□ -0.52
XIST-208ENST00000602495 ABCC1P33527 1531 aa11.77□□□□□ -0.52
XIST-208ENST00000602495 PREX2Q70Z35 1606 aa11.77□□□□□ -0.53
XIST-208ENST00000602495 ZMYM3Q14202 1370 aa11.77□□□□□ -0.53
XIST-208ENST00000602495 UHRF1BP1Q6BDS2 1440 aa11.76□□□□□ -0.53
XIST-208ENST00000602495 LOC105371045A0A1W2PR82 267 aa11.75□□□□□ -0.53
XIST-208ENST00000602495 GGT6Q6P531 493 aa11.75□□□□□ -0.53
XIST-208ENST00000602495 ABCA6Q8N139 1617 aa11.75□□□□□ -0.53
XIST-208ENST00000602495 CDC42BPAQ5VT25 1732 aa11.74□□□□□ -0.53
XIST-208ENST00000602495 KIDINS220Q9ULH0 1771 aa11.74□□□□□ -0.53
XIST-208ENST00000602495 CNTLNQ9NXG0 1405 aa11.74□□□□□ -0.53
XIST-208ENST00000602495 PLEKHH2Q8IVE3 1493 aa11.74□□□□□ -0.53
XIST-208ENST00000602495 SAMD9LQ8IVG5 1584 aa11.74□□□□□ -0.53
XIST-208ENST00000602495 ITSN2Q9NZM3 1697 aa11.73□□□□□ -0.53
XIST-208ENST00000602495 RSPH4AQ5TD94 716 aa11.72□□□□□ -0.53
XIST-208ENST00000602495 MYCNP04198 464 aaPredicted RBP11.71□□□□□ -0.53
XIST-208ENST00000602495 PREX1Q8TCU6 1659 aa11.71□□□□□ -0.54
XIST-208ENST00000602495 SYCP2Q9BX26 1530 aa11.7□□□□□ -0.54
XIST-208ENST00000602495 A2MP01023 1474 aa11.7□□□□□ -0.54
XIST-208ENST00000602495 PTPRTO14522 1441 aa11.7□□□□□ -0.54
XIST-208ENST00000602495 MBD5Q9P267 1494 aa11.7□□□□□ -0.54
XIST-208ENST00000602495 CEP162Q5TB80 1403 aa11.69□□□□□ -0.54
XIST-208ENST00000602495 NCKAP5LQ9HCH0 1330 aa11.69□□□□□ -0.54
XIST-208ENST00000602495 STRCQ7RTU9 1775 aa11.69□□□□□ -0.54
XIST-208ENST00000602495 NPATQ14207 1427 aa11.69□□□□□ -0.54
XIST-208ENST00000602495 C3P01024 1663 aa11.68□□□□□ -0.54
XIST-208ENST00000602495 DHX29Q7Z478 1369 aaKnown RBP11.68□□□□□ -0.54
XIST-208ENST00000602495 RTEL1-TNFRSF6BF6WH68 1400 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms