RNA–Protein interactions for RNA: ENST00000602398.2

SBNO1-203, Transcript of strawberry notch homolog 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SBNO1, Length 4,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1-203ENST00000602398 IFT140Q96RY7 1462 aa12.26□□□□□ -0.45
SBNO1-203ENST00000602398 KIF21BO75037 1637 aa12.26□□□□□ -0.45
SBNO1-203ENST00000602398 HAP1P54257 671 aaPredicted RBP12.25□□□□□ -0.45
SBNO1-203ENST00000602398 TOP2BQ02880 1626 aa12.25□□□□□ -0.45
SBNO1-203ENST00000602398 CCDC18Q5T9S5 1454 aa12.24□□□□□ -0.45
SBNO1-203ENST00000602398 ANKRD30AQ9BXX3 1397 aa12.24□□□□□ -0.45
SBNO1-203ENST00000602398 ERICH6Q7L0X2 663 aa12.24□□□□□ -0.45
SBNO1-203ENST00000602398 TRAK1Q9UPV9 953 aa12.24□□□□□ -0.45
SBNO1-203ENST00000602398 PRXQ9BXM0 1461 aa12.23□□□□□ -0.45
SBNO1-203ENST00000602398 HSPA5P11021 654 aaKnown RBP12.23□□□□□ -0.45
SBNO1-203ENST00000602398 KANK1Q14678 1352 aa12.22□□□□□ -0.45
SBNO1-203ENST00000602398 DNMBPQ6XZF7 1577 aa12.21□□□□□ -0.45
SBNO1-203ENST00000602398 PLB1Q6P1J6 1458 aa12.21□□□□□ -0.45
SBNO1-203ENST00000602398 PAK3O75914 559 aaPredicted RBP12.19□□□□□ -0.46
SBNO1-203ENST00000602398 WDR43Q15061 677 aaKnown RBP eCLIP12.19□□□□□ -0.46
SBNO1-203ENST00000602398 KNSTRNQ9Y448 316 aa12.19□□□□□ -0.46
SBNO1-203ENST00000602398 FKBP8Q14318 412 aa12.18□□□□□ -0.46
SBNO1-203ENST00000602398 CDK13Q14004 1512 aaKnown RBP12.18□□□□□ -0.46
SBNO1-203ENST00000602398 LAMC3Q9Y6N6 1575 aa12.18□□□□□ -0.46
SBNO1-203ENST00000602398 TMEM132EQ6IEE7 984 aa12.16□□□□□ -0.46
SBNO1-203ENST00000602398 U2SURPO15042 1029 aaKnown RBP12.15□□□□□ -0.46
SBNO1-203ENST00000602398 MYT1Q01538 1121 aa12.15□□□□□ -0.46
SBNO1-203ENST00000602398 ARXQ96QS3 562 aa12.15□□□□□ -0.46
SBNO1-203ENST00000602398 LAS1LQ9Y4W2 734 aaKnown RBP12.15□□□□□ -0.46
SBNO1-203ENST00000602398 SCAPERQ9BY12 1400 aa12.15□□□□□ -0.47
SBNO1-203ENST00000602398 ABCA10Q8WWZ4 1543 aa12.15□□□□□ -0.47
SBNO1-203ENST00000602398 ST20-MTHFSA0A0A6YYL1 179 aa12.14□□□□□ -0.47
SBNO1-203ENST00000602398 NCOA2Q15596 1464 aa12.13□□□□□ -0.47
SBNO1-203ENST00000602398 KIF15Q9NS87 1388 aa12.13□□□□□ -0.47
SBNO1-203ENST00000602398 LRRC9Q6ZRR7 1453 aa12.13□□□□□ -0.47
SBNO1-203ENST00000602398 ACIN1Q9UKV3 1341 aaKnown RBP12.12□□□□□ -0.47
SBNO1-203ENST00000602398 FGD6Q6ZV73 1430 aa12.12□□□□□ -0.47
SBNO1-203ENST00000602398 RBM33Q96EV2 1170 aaKnown RBP12.12□□□□□ -0.47
SBNO1-203ENST00000602398 DHX57Q6P158 1386 aaKnown RBP12.12□□□□□ -0.47
SBNO1-203ENST00000602398 PEG3Q9GZU2 1588 aa12.12□□□□□ -0.47
SBNO1-203ENST00000602398 ROCK2O75116 1388 aaKnown RBP12.12□□□□□ -0.47
SBNO1-203ENST00000602398 CEBPAP49715 358 aaPredicted RBP12.11□□□□□ -0.47
SBNO1-203ENST00000602398 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.11□□□□□ -0.47
SBNO1-203ENST00000602398 MINK1Q8N4C8 1332 aaPredicted RBP12.1□□□□□ -0.47
SBNO1-203ENST00000602398 GRIN2AQ12879 1464 aa12.09□□□□□ -0.47
SBNO1-203ENST00000602398 MYOM3Q5VTT5 1437 aa12.09□□□□□ -0.47
SBNO1-203ENST00000602398 TMF1P82094 1093 aa12.08□□□□□ -0.48
SBNO1-203ENST00000602398 CASKIN1Q8WXD9 1431 aa12.08□□□□□ -0.48
SBNO1-203ENST00000602398 RSPH4AQ5TD94 716 aa12.08□□□□□ -0.48
SBNO1-203ENST00000602398 ARHGAP5Q13017 1502 aa12.07□□□□□ -0.48
SBNO1-203ENST00000602398 SYNJ2O15056 1496 aa12.07□□□□□ -0.48
SBNO1-203ENST00000602398 ARHGEF11O15085 1522 aa12.07□□□□□ -0.48
SBNO1-203ENST00000602398 KIAA0586Q9BVV6 1533 aa12.07□□□□□ -0.48
SBNO1-203ENST00000602398 LTV1Q96GA3 475 aaPredicted RBP12.07□□□□□ -0.48
SBNO1-203ENST00000602398 SLC26A8Q96RN1 970 aa12.05□□□□□ -0.48
SBNO1-203ENST00000602398 EID1Q9Y6B2 187 aa12.05□□□□□ -0.48
SBNO1-203ENST00000602398 NBPF1Q3BBV0 1214 aa12.04□□□□□ -0.48
SBNO1-203ENST00000602398 NUTM2GQ5VZR2 741 aa12.04□□□□□ -0.48
SBNO1-203ENST00000602398 CFAP70Q5T0N1 1121 aa12.04□□□□□ -0.48
SBNO1-203ENST00000602398 CCDC144AA2RUR9 1427 aa12.03□□□□□ -0.48
SBNO1-203ENST00000602398 UACAQ9BZF9 1416 aa12.03□□□□□ -0.48
SBNO1-203ENST00000602398 ANKRD50Q9ULJ7 1429 aa12.03□□□□□ -0.48
SBNO1-203ENST00000602398 NPM2Q86SE8 214 aaKnown RBP12.03□□□□□ -0.48
SBNO1-203ENST00000602398 DAXXQ9UER7 740 aaPredicted RBP12.03□□□□□ -0.48
SBNO1-203ENST00000602398 MORC1Q86VD1 984 aa12.02□□□□□ -0.48
SBNO1-203ENST00000602398 FBXO31Q5XUX0 539 aaPredicted RBP12.02□□□□□ -0.48
SBNO1-203ENST00000602398 NGDNQ8NEJ9 315 aaKnown RBP12.02□□□□□ -0.49
SBNO1-203ENST00000602398 ERICH3Q5RHP9 1530 aa12.01□□□□□ -0.49
SBNO1-203ENST00000602398 HDGFP51858 240 aaKnown RBP12.01□□□□□ -0.49
SBNO1-203ENST00000602398 SUPT16HQ9Y5B9 1047 aaKnown RBP12.01□□□□□ -0.49
SBNO1-203ENST00000602398 KIF21AQ7Z4S6 1674 aa12.01□□□□□ -0.49
SBNO1-203ENST00000602398 CDCA8Q53HL2 280 aa12□□□□□ -0.49
SBNO1-203ENST00000602398 ZBTB47Q9UFB7 747 aaPredicted RBP12□□□□□ -0.49
SBNO1-203ENST00000602398 EPRSP07814 1512 aaKnown RBP12□□□□□ -0.49
SBNO1-203ENST00000602398 CCDC146Q8IYE0 955 aa11.99□□□□□ -0.49
SBNO1-203ENST00000602398 IQGAP2Q13576 1575 aa11.99□□□□□ -0.49
SBNO1-203ENST00000602398 AEBP2Q6ZN18 517 aaPredicted RBP11.99□□□□□ -0.49
SBNO1-203ENST00000602398 TROQ12816 1431 aaPredicted RBP11.99□□□□□ -0.49
SBNO1-203ENST00000602398 FRAT1Q92837 279 aaPredicted RBP11.98□□□□□ -0.49
SBNO1-203ENST00000602398 PANK3Q9H999 370 aa11.97□□□□□ -0.49
SBNO1-203ENST00000602398 U2AF1L5P0DN76 240 aaPredicted RBP11.96□□□□□ -0.49
SBNO1-203ENST00000602398 U2AF1Q01081 240 aaKnown RBP eCLIP11.96□□□□□ -0.491e-7■■■■■ 28.2
SBNO1-203ENST00000602398 CFAP53Q96M91 514 aa11.96□□□□□ -0.49
SBNO1-203ENST00000602398 RRP7AQ9Y3A4 280 aaKnown RBP11.96□□□□□ -0.49
SBNO1-203ENST00000602398 CCDC9Q9Y3X0 531 aaKnown RBP11.96□□□□□ -0.49
SBNO1-203ENST00000602398 NBPF8Q3BBV2 869 aa11.96□□□□□ -0.5
SBNO1-203ENST00000602398 TXNDC2Q86VQ3 553 aa11.96□□□□□ -0.5
SBNO1-203ENST00000602398 CABP2Q9NPB3 220 aa11.95□□□□□ -0.5
SBNO1-203ENST00000602398 CD109Q6YHK3 1445 aa11.95□□□□□ -0.5
SBNO1-203ENST00000602398 MAGI1Q96QZ7 1491 aaPredicted RBP11.95□□□□□ -0.5
SBNO1-203ENST00000602398 FYCO1Q9BQS8 1478 aa11.95□□□□□ -0.5
SBNO1-203ENST00000602398 CSB-PGBD3P0DP91 1061 aa11.95□□□□□ -0.5
SBNO1-203ENST00000602398 VGFO15240 615 aaPredicted RBP11.94□□□□□ -0.5
SBNO1-203ENST00000602398 PCF11O94913 1555 aaKnown RBP11.94□□□□□ -0.5
SBNO1-203ENST00000602398 ZNF330Q9Y3S2 320 aaPredicted RBP11.94□□□□□ -0.5
SBNO1-203ENST00000602398 C9orf84Q5VXU9 1444 aa11.94□□□□□ -0.5
SBNO1-203ENST00000602398 PMFBP1Q8TBY8 1022 aa11.93□□□□□ -0.5
SBNO1-203ENST00000602398 XPCQ01831 940 aaPredicted RBP11.93□□□□□ -0.5
SBNO1-203ENST00000602398 CCDC136Q96JN2 1154 aa11.93□□□□□ -0.5
SBNO1-203ENST00000602398 MAPK8IP3Q9UPT6 1336 aa11.93□□□□□ -0.5
SBNO1-203ENST00000602398 HDGFL2Q7Z4V5 671 aaPredicted RBP11.92□□□□□ -0.5
SBNO1-203ENST00000602398 ELL2O00472 640 aaPredicted RBP11.9□□□□□ -0.51
SBNO1-203ENST00000602398 USP35Q9P2H5 1018 aa11.9□□□□□ -0.51
SBNO1-203ENST00000602398 GGNBP2Q9H3C7 697 aa11.89□□□□□ -0.51
SBNO1-203ENST00000602398 USP47Q96K76 1375 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms