RNA–Protein interactions for RNA: ENST00000602169.1

CALM3-213, Transcript of calmodulin 3, humanhuman

TSL 2

Gene CALM3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3-213ENST00000602169 MYOM3Q5VTT5 1437 aa20.53■□□□□ 0.88
CALM3-213ENST00000602169 MIA2Q96PC5 1412 aa20.53■□□□□ 0.88
CALM3-213ENST00000602169 PREX2Q70Z35 1606 aa20.53■□□□□ 0.88
CALM3-213ENST00000602169 FANCAO15360 1455 aa20.52■□□□□ 0.88
CALM3-213ENST00000602169 CFDP1Q9UEE9 299 aaPredicted RBP20.52■□□□□ 0.88
CALM3-213ENST00000602169 MYO5CQ9NQX4 1742 aa20.52■□□□□ 0.88
CALM3-213ENST00000602169 CFAP74Q9C0B2 1584 aa20.5■□□□□ 0.87
CALM3-213ENST00000602169 ARHGAP5Q13017 1502 aa20.49■□□□□ 0.87
CALM3-213ENST00000602169 ITSN2Q9NZM3 1697 aa20.49■□□□□ 0.87
CALM3-213ENST00000602169 CDC42BPAQ5VT25 1732 aa20.48■□□□□ 0.87
CALM3-213ENST00000602169 PLEKHH2Q8IVE3 1493 aa20.47■□□□□ 0.87
CALM3-213ENST00000602169 AKNAQ7Z591 1439 aa20.46■□□□□ 0.87
CALM3-213ENST00000602169 KIAA1107Q9UPP5 1409 aa20.46■□□□□ 0.87
CALM3-213ENST00000602169 FGD6Q6ZV73 1430 aa20.45■□□□□ 0.86
CALM3-213ENST00000602169 KDM4FA0A1W2PPD8 638 aa20.45■□□□□ 0.86
CALM3-213ENST00000602169 CDC42BPBQ9Y5S2 1711 aa20.44■□□□□ 0.86
CALM3-213ENST00000602169 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.42■□□□□ 0.862e-11■■□□□ 12.5
CALM3-213ENST00000602169 PPARGC1BQ86YN6 1023 aaKnown RBP20.41■□□□□ 0.86
CALM3-213ENST00000602169 ADGRL1O94910 1474 aa20.41■□□□□ 0.86
CALM3-213ENST00000602169 TCOF1Q13428 1488 aaKnown RBP20.41■□□□□ 0.86
CALM3-213ENST00000602169 RSPH4AQ5TD94 716 aa20.4■□□□□ 0.86
CALM3-213ENST00000602169 ABCC1P33527 1531 aa20.39■□□□□ 0.85
CALM3-213ENST00000602169 RRBP1Q9P2E9 1410 aaKnown RBP20.39■□□□□ 0.85
CALM3-213ENST00000602169 SAMD9LQ8IVG5 1584 aa20.38■□□□□ 0.85
CALM3-213ENST00000602169 SCAPERQ9BY12 1400 aa20.38■□□□□ 0.85
CALM3-213ENST00000602169 DENND4BO75064 1496 aaPredicted RBP20.37■□□□□ 0.85
CALM3-213ENST00000602169 CAMSAP2Q08AD1 1489 aa20.37■□□□□ 0.85
CALM3-213ENST00000602169 ZNF777Q9ULD5 760 aaPredicted RBP20.37■□□□□ 0.85
CALM3-213ENST00000602169 MBD5Q9P267 1494 aa20.37■□□□□ 0.85
CALM3-213ENST00000602169 POGZQ7Z3K3 1410 aa20.36■□□□□ 0.85
CALM3-213ENST00000602169 ZNF644Q9H582 1327 aaPredicted RBP20.35■□□□□ 0.85
CALM3-213ENST00000602169 ZNF518AQ6AHZ1 1483 aa20.34■□□□□ 0.85
CALM3-213ENST00000602169 PTPN23Q9H3S7 1636 aa20.34■□□□□ 0.85
CALM3-213ENST00000602169 ARHGEF12Q9NZN5 1544 aa20.33■□□□□ 0.85
CALM3-213ENST00000602169 ARHGEF5Q12774 1597 aa20.32■□□□□ 0.84
CALM3-213ENST00000602169 SYCP2Q9BX26 1530 aa20.32■□□□□ 0.84
CALM3-213ENST00000602169 CCDC141Q6ZP82 1450 aa20.3■□□□□ 0.84
CALM3-213ENST00000602169 TRAPPC8Q9Y2L5 1435 aa20.29■□□□□ 0.84
CALM3-213ENST00000602169 HNRNPMP52272 730 aaKnown RBP eCLIP20.29■□□□□ 0.84
CALM3-213ENST00000602169 MAGI2Q86UL8 1455 aa20.29■□□□□ 0.84
CALM3-213ENST00000602169 KDM5CP41229 1560 aa20.29■□□□□ 0.84
CALM3-213ENST00000602169 ZMYM4Q5VZL5 1548 aa20.28■□□□□ 0.84
CALM3-213ENST00000602169 RAPGEF3O95398 923 aa20.28■□□□□ 0.84
CALM3-213ENST00000602169 MLH3Q9UHC1 1453 aa20.26■□□□□ 0.83
CALM3-213ENST00000602169 FAM50AQ14320 339 aaKnown RBP20.26■□□□□ 0.83
CALM3-213ENST00000602169 AFAP1Q8N556 730 aa20.26■□□□□ 0.83
CALM3-213ENST00000602169 RTEL1-TNFRSF6BF6WH68 1400 aa20.26■□□□□ 0.83
CALM3-213ENST00000602169 FRMPD1Q5SYB0 1578 aa20.25■□□□□ 0.83
CALM3-213ENST00000602169 SHANK2Q9UPX8 1470 aa20.25■□□□□ 0.83
CALM3-213ENST00000602169 RICTORQ6R327 1708 aa20.25■□□□□ 0.83
CALM3-213ENST00000602169 ABCC5O15440 1437 aa20.24■□□□□ 0.83
CALM3-213ENST00000602169 DAPK1P53355 1430 aa20.24■□□□□ 0.83
CALM3-213ENST00000602169 TSPY4P0CV99 314 aa20.23■□□□□ 0.83
CALM3-213ENST00000602169 TSPY10P0CW01 314 aa20.23■□□□□ 0.83
CALM3-213ENST00000602169 DNMT1P26358 1616 aaKnown RBP20.23■□□□□ 0.83
CALM3-213ENST00000602169 SPAG9O60271 1321 aaKnown RBP20.22■□□□□ 0.83
CALM3-213ENST00000602169 MAST1Q9Y2H9 1570 aa20.2■□□□□ 0.82
CALM3-213ENST00000602169 C9orf84Q5VXU9 1444 aa20.19■□□□□ 0.82
CALM3-213ENST00000602169 HECW2Q9P2P5 1572 aa20.17■□□□□ 0.82
CALM3-213ENST00000602169 INO80Q9ULG1 1556 aaPredicted RBP20.17■□□□□ 0.82
CALM3-213ENST00000602169 ZFYVE16Q7Z3T8 1539 aa20.17■□□□□ 0.82
CALM3-213ENST00000602169 ROCK1Q13464 1354 aa20.16■□□□□ 0.82
CALM3-213ENST00000602169 ADGRL2O95490 1459 aa20.16■□□□□ 0.82
CALM3-213ENST00000602169 ATP7AQ04656 1500 aa20.16■□□□□ 0.82
CALM3-213ENST00000602169 ARHGEF40Q8TER5 1519 aa20.13■□□□□ 0.81
CALM3-213ENST00000602169 PTPRKQ15262 1439 aa20.13■□□□□ 0.81
CALM3-213ENST00000602169 CROCC2H7BZ55 1655 aa20.13■□□□□ 0.81
CALM3-213ENST00000602169 NCOA1Q15788 1441 aa20.12■□□□□ 0.81
CALM3-213ENST00000602169 ANKRD30AQ9BXX3 1397 aa20.12■□□□□ 0.81
CALM3-213ENST00000602169 ATP10AO60312 1499 aa20.11■□□□□ 0.81
CALM3-213ENST00000602169 YEATS2Q9ULM3 1422 aa20.11■□□□□ 0.81
CALM3-213ENST00000602169 PLXNC1O60486 1568 aa20.11■□□□□ 0.81
CALM3-213ENST00000602169 KIDINS220Q9ULH0 1771 aa20.11■□□□□ 0.81
CALM3-213ENST00000602169 REREQ9P2R6 1566 aa20.1■□□□□ 0.81
CALM3-213ENST00000602169 DIP2CQ9Y2E4 1556 aa20.08■□□□□ 0.8
CALM3-213ENST00000602169 TRIM26Q12899 539 aaPredicted RBP20.07■□□□□ 0.8
CALM3-213ENST00000602169 MYT1LQ9UL68 1186 aa20.07■□□□□ 0.8
CALM3-213ENST00000602169 DHX29Q7Z478 1369 aaKnown RBP20.07■□□□□ 0.8
CALM3-213ENST00000602169 KIF15Q9NS87 1388 aa20.07■□□□□ 0.8
CALM3-213ENST00000602169 ABCA6Q8N139 1617 aa20.05■□□□□ 0.8
CALM3-213ENST00000602169 SIGLEC1Q9BZZ2 1709 aa20.05■□□□□ 0.8
CALM3-213ENST00000602169 A2MP01023 1474 aa20.05■□□□□ 0.8
CALM3-213ENST00000602169 DUOX2Q9NRD8 1548 aa20.04■□□□□ 0.8
CALM3-213ENST00000602169 ITGAEP38570 1179 aa20.04■□□□□ 0.8
CALM3-213ENST00000602169 CHIC2Q9UKJ5 165 aa20.04■□□□□ 0.8
CALM3-213ENST00000602169 AGLP35573 1532 aa20.03■□□□□ 0.8
CALM3-213ENST00000602169 HFM1A2PYH4 1435 aa20.02■□□□□ 0.8
CALM3-213ENST00000602169 ERBINQ96RT1 1412 aa20.02■□□□□ 0.8
CALM3-213ENST00000602169 ADAMTSL3P82987 1691 aa20.02■□□□□ 0.8
CALM3-213ENST00000602169 ADGBQ8N7X0 1667 aa20.02■□□□□ 0.8
CALM3-213ENST00000602169 MADDQ8WXG6 1647 aa20.02■□□□□ 0.79
CALM3-213ENST00000602169 RRP7BPQ9NSQ0 103 aa20.01■□□□□ 0.79
CALM3-213ENST00000602169 BCORL1Q5H9F3 1711 aa20.01■□□□□ 0.79
CALM3-213ENST00000602169 ARID4BQ4LE39 1312 aaPredicted RBP20.01■□□□□ 0.79
CALM3-213ENST00000602169 NAIPQ13075 1403 aa19.98■□□□□ 0.79
CALM3-213ENST00000602169 ANKRD50Q9ULJ7 1429 aa19.98■□□□□ 0.79
CALM3-213ENST00000602169 ACIN1Q9UKV3 1341 aaKnown RBP19.97■□□□□ 0.79
CALM3-213ENST00000602169 RIMS1Q86UR5 1692 aaKnown RBP19.96■□□□□ 0.79
CALM3-213ENST00000602169 PTPRMP28827 1452 aa19.95■□□□□ 0.78
CALM3-213ENST00000602169 PPP6R1Q9UPN7 881 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms