RNA–Protein interactions for RNA: ENST00000601609.1

PPFIA4-213, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-213ENST00000601609 KDM4FA0A1W2PPD8 638 aa25.21■■□□□ 1.63
PPFIA4-213ENST00000601609 PREX2Q70Z35 1606 aa25.21■■□□□ 1.63
PPFIA4-213ENST00000601609 VPS8Q8N3P4 1428 aa25.2■■□□□ 1.63
PPFIA4-213ENST00000601609 CDC42BPBQ9Y5S2 1711 aa25.18■■□□□ 1.62
PPFIA4-213ENST00000601609 EHBP1L1Q8N3D4 1523 aa25.17■■□□□ 1.62
PPFIA4-213ENST00000601609 POGZQ7Z3K3 1410 aa25.17■■□□□ 1.62
PPFIA4-213ENST00000601609 CDC42BPAQ5VT25 1732 aa25.16■■□□□ 1.62
PPFIA4-213ENST00000601609 ARHGEF40Q8TER5 1519 aa25.15■■□□□ 1.62
PPFIA4-213ENST00000601609 ZMYM4Q5VZL5 1548 aa25.13■■□□□ 1.61
PPFIA4-213ENST00000601609 ZFYVE16Q7Z3T8 1539 aa25.12■■□□□ 1.61
PPFIA4-213ENST00000601609 ZNF777Q9ULD5 760 aaPredicted RBP25.12■■□□□ 1.61
PPFIA4-213ENST00000601609 CCNB3Q8WWL7 1395 aa25.12■■□□□ 1.61
PPFIA4-213ENST00000601609 ARID4BQ4LE39 1312 aaPredicted RBP25.12■■□□□ 1.61
PPFIA4-213ENST00000601609 MYT1LQ9UL68 1186 aa25.11■■□□□ 1.61
PPFIA4-213ENST00000601609 TIAM1Q13009 1591 aa25.1■■□□□ 1.61
PPFIA4-213ENST00000601609 ZNF518AQ6AHZ1 1483 aa25.09■■□□□ 1.61
PPFIA4-213ENST00000601609 ABCC1P33527 1531 aa25.08■■□□□ 1.61
PPFIA4-213ENST00000601609 GPATCH8Q9UKJ3 1502 aaKnown RBP25.08■■□□□ 1.61
PPFIA4-213ENST00000601609 MAGI2Q86UL8 1455 aa25.07■■□□□ 1.6
PPFIA4-213ENST00000601609 YEATS2Q9ULM3 1422 aa25.06■■□□□ 1.6
PPFIA4-213ENST00000601609 CFDP1Q9UEE9 299 aaPredicted RBP25.06■■□□□ 1.6
PPFIA4-213ENST00000601609 ITSN2Q9NZM3 1697 aa25.06■■□□□ 1.6
PPFIA4-213ENST00000601609 SUPT6HQ7KZ85 1726 aaKnown RBP25.04■■□□□ 1.6
PPFIA4-213ENST00000601609 SAMD9LQ8IVG5 1584 aa25.03■■□□□ 1.6
PPFIA4-213ENST00000601609 AFAP1Q8N556 730 aa25.03■■□□□ 1.6
PPFIA4-213ENST00000601609 APLP2Q06481 763 aa25.01■■□□□ 1.59
PPFIA4-213ENST00000601609 KDM5CP41229 1560 aa25.01■■□□□ 1.59
PPFIA4-213ENST00000601609 HECW2Q9P2P5 1572 aa25.01■■□□□ 1.59
PPFIA4-213ENST00000601609 NCOA2Q15596 1464 aa25■■□□□ 1.59
PPFIA4-213ENST00000601609 SYCP2Q9BX26 1530 aa25■■□□□ 1.59
PPFIA4-213ENST00000601609 ARHGEF12Q9NZN5 1544 aa25■■□□□ 1.59
PPFIA4-213ENST00000601609 TRAPPC8Q9Y2L5 1435 aa24.99■■□□□ 1.59
PPFIA4-213ENST00000601609 LRRC9Q6ZRR7 1453 aa24.98■■□□□ 1.59
PPFIA4-213ENST00000601609 BCORL1Q5H9F3 1711 aa24.97■■□□□ 1.59
PPFIA4-213ENST00000601609 PLEKHH2Q8IVE3 1493 aa24.96■■□□□ 1.59
PPFIA4-213ENST00000601609 C9orf84Q5VXU9 1444 aa24.95■■□□□ 1.59
PPFIA4-213ENST00000601609 MAP3K1Q13233 1512 aa24.95■■□□□ 1.58
PPFIA4-213ENST00000601609 ATP10AO60312 1499 aa24.95■■□□□ 1.58
PPFIA4-213ENST00000601609 HNRNPMP52272 730 aaKnown RBP eCLIP24.94■■□□□ 1.58
PPFIA4-213ENST00000601609 ADAMTSL3P82987 1691 aa24.92■■□□□ 1.58
PPFIA4-213ENST00000601609 MLH3Q9UHC1 1453 aa24.91■■□□□ 1.58
PPFIA4-213ENST00000601609 MLECQ14165 292 aa24.91■■□□□ 1.58
PPFIA4-213ENST00000601609 ABCA6Q8N139 1617 aa24.9■■□□□ 1.58
PPFIA4-213ENST00000601609 MADDQ8WXG6 1647 aa24.9■■□□□ 1.58
PPFIA4-213ENST00000601609 SIGLEC1Q9BZZ2 1709 aa24.9■■□□□ 1.58
PPFIA4-213ENST00000601609 DIP2CQ9Y2E4 1556 aa24.9■■□□□ 1.58
PPFIA4-213ENST00000601609 KIAA1107Q9UPP5 1409 aa24.9■■□□□ 1.58
PPFIA4-213ENST00000601609 KANK4Q5T7N3 995 aaPredicted RBP24.9■■□□□ 1.58
PPFIA4-213ENST00000601609 SPAG9O60271 1321 aaKnown RBP24.88■■□□□ 1.57
PPFIA4-213ENST00000601609 ZNF644Q9H582 1327 aaPredicted RBP24.88■■□□□ 1.57
PPFIA4-213ENST00000601609 KIDINS220Q9ULH0 1771 aa24.85■■□□□ 1.57
PPFIA4-213ENST00000601609 RIMS1Q86UR5 1692 aaKnown RBP24.85■■□□□ 1.57
PPFIA4-213ENST00000601609 CAMSAP2Q08AD1 1489 aa24.84■■□□□ 1.57
PPFIA4-213ENST00000601609 PTPRMP28827 1452 aa24.83■■□□□ 1.57
PPFIA4-213ENST00000601609 ATP7AQ04656 1500 aa24.82■■□□□ 1.56
PPFIA4-213ENST00000601609 PLPPR3Q6T4P5 718 aa24.82■■□□□ 1.56
PPFIA4-213ENST00000601609 REREQ9P2R6 1566 aa24.8■■□□□ 1.56
PPFIA4-213ENST00000601609 FER1L4A9Z1Z3 1794 aa24.8■■□□□ 1.56
PPFIA4-213ENST00000601609 INO80Q9ULG1 1556 aaPredicted RBP24.8■■□□□ 1.56
PPFIA4-213ENST00000601609 MYOM3Q5VTT5 1437 aa24.78■■□□□ 1.56
PPFIA4-213ENST00000601609 CCDC141Q6ZP82 1450 aa24.77■■□□□ 1.56
PPFIA4-213ENST00000601609 MBD5Q9P267 1494 aa24.77■■□□□ 1.56
PPFIA4-213ENST00000601609 AGLP35573 1532 aa24.72■■□□□ 1.55
PPFIA4-213ENST00000601609 ESF1Q9H501 851 aaKnown RBP24.72■■□□□ 1.55
PPFIA4-213ENST00000601609 MIA2Q96PC5 1412 aa24.71■■□□□ 1.55
PPFIA4-213ENST00000601609 RSPH4AQ5TD94 716 aa24.7■■□□□ 1.54
PPFIA4-213ENST00000601609 A2MP01023 1474 aa24.7■■□□□ 1.54
PPFIA4-213ENST00000601609 ADGBQ8N7X0 1667 aa24.69■■□□□ 1.54
PPFIA4-213ENST00000601609 ARHGEF5Q12774 1597 aa24.69■■□□□ 1.54
PPFIA4-213ENST00000601609 TSPY4P0CV99 314 aa24.67■■□□□ 1.54
PPFIA4-213ENST00000601609 TSPY10P0CW01 314 aa24.67■■□□□ 1.54
PPFIA4-213ENST00000601609 RTEL1-TNFRSF6BF6WH68 1400 aa24.67■■□□□ 1.54
PPFIA4-213ENST00000601609 PLXNC1O60486 1568 aa24.64■■□□□ 1.54
PPFIA4-213ENST00000601609 PTPN23Q9H3S7 1636 aa24.64■■□□□ 1.53
PPFIA4-213ENST00000601609 FGD6Q6ZV73 1430 aa24.61■■□□□ 1.53
PPFIA4-213ENST00000601609 GGT6Q6P531 493 aa24.59■■□□□ 1.53
PPFIA4-213ENST00000601609 CEBPAP49715 358 aaPredicted RBP24.58■■□□□ 1.53
PPFIA4-213ENST00000601609 DHX29Q7Z478 1369 aaKnown RBP24.56■■□□□ 1.52
PPFIA4-213ENST00000601609 MAST1Q9Y2H9 1570 aa24.56■■□□□ 1.52
PPFIA4-213ENST00000601609 CNTLNQ9NXG0 1405 aa24.56■■□□□ 1.52
PPFIA4-213ENST00000601609 C3P01024 1663 aa24.53■■□□□ 1.52
PPFIA4-213ENST00000601609 CROCC2H7BZ55 1655 aa24.53■■□□□ 1.52
PPFIA4-213ENST00000601609 TCOF1Q13428 1488 aaKnown RBP24.52■■□□□ 1.52
PPFIA4-213ENST00000601609 KIF3BO15066 747 aa24.52■■□□□ 1.52
PPFIA4-213ENST00000601609 FAM50AQ14320 339 aaKnown RBP24.52■■□□□ 1.52
PPFIA4-213ENST00000601609 PPARGC1BQ86YN6 1023 aaKnown RBP24.52■■□□□ 1.52
PPFIA4-213ENST00000601609 CLTCQ00610 1675 aaKnown RBP24.52■■□□□ 1.52
PPFIA4-213ENST00000601609 LMTK3Q96Q04 1460 aa24.51■■□□□ 1.51
PPFIA4-213ENST00000601609 DAPK1P53355 1430 aa24.5■■□□□ 1.51
PPFIA4-213ENST00000601609 DNMT1P26358 1616 aaKnown RBP24.5■■□□□ 1.51
PPFIA4-213ENST00000601609 ABCC5O15440 1437 aa24.49■■□□□ 1.51
PPFIA4-213ENST00000601609 SHANK2Q9UPX8 1470 aa24.49■■□□□ 1.51
PPFIA4-213ENST00000601609 MROH2AA6NES4 1674 aa24.49■■□□□ 1.51
PPFIA4-213ENST00000601609 PREX1Q8TCU6 1659 aa24.48■■□□□ 1.51
PPFIA4-213ENST00000601609 ZMYM3Q14202 1370 aa24.44■■□□□ 1.5
PPFIA4-213ENST00000601609 HSPA2P54652 639 aa24.44■■□□□ 1.5
PPFIA4-213ENST00000601609 UHRF1BP1Q6BDS2 1440 aa24.44■■□□□ 1.5
PPFIA4-213ENST00000601609 CHIC2Q9UKJ5 165 aa24.43■■□□□ 1.5
PPFIA4-213ENST00000601609 PPP6R1Q9UPN7 881 aa24.43■■□□□ 1.5
PPFIA4-213ENST00000601609 KIF15Q9NS87 1388 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms