RNA–Protein interactions for RNA: ENST00000601194.1

PSMC4-205, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 3

Gene PSMC4, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-205ENST00000601194 PREX2Q70Z35 1606 aa22.66■■□□□ 1.22
PSMC4-205ENST00000601194 RICTORQ6R327 1708 aa22.63■■□□□ 1.21
PSMC4-205ENST00000601194 CDC42BPBQ9Y5S2 1711 aa22.63■■□□□ 1.21
PSMC4-205ENST00000601194 SCAPERQ9BY12 1400 aa22.63■■□□□ 1.21
PSMC4-205ENST00000601194 GPATCH8Q9UKJ3 1502 aaKnown RBP22.62■■□□□ 1.21
PSMC4-205ENST00000601194 CDC42BPAQ5VT25 1732 aa22.62■■□□□ 1.21
PSMC4-205ENST00000601194 POGZQ7Z3K3 1410 aa22.61■■□□□ 1.21
PSMC4-205ENST00000601194 MAP3K1Q13233 1512 aa22.61■■□□□ 1.21
PSMC4-205ENST00000601194 ZMYM4Q5VZL5 1548 aa22.58■■□□□ 1.21
PSMC4-205ENST00000601194 CCNB3Q8WWL7 1395 aa22.58■■□□□ 1.21
PSMC4-205ENST00000601194 LRRC9Q6ZRR7 1453 aa22.58■■□□□ 1.2
PSMC4-205ENST00000601194 ABCC1P33527 1531 aa22.56■■□□□ 1.2
PSMC4-205ENST00000601194 NCOA2Q15596 1464 aa22.54■■□□□ 1.2
PSMC4-205ENST00000601194 ARHGEF40Q8TER5 1519 aa22.53■■□□□ 1.2
PSMC4-205ENST00000601194 SUPT6HQ7KZ85 1726 aaKnown RBP22.53■■□□□ 1.2
PSMC4-205ENST00000601194 ZNF518AQ6AHZ1 1483 aa22.53■■□□□ 1.2
PSMC4-205ENST00000601194 ARHGEF12Q9NZN5 1544 aa22.52■■□□□ 1.2
PSMC4-205ENST00000601194 KDM4FA0A1W2PPD8 638 aa22.52■■□□□ 1.2
PSMC4-205ENST00000601194 KANK4Q5T7N3 995 aaPredicted RBP22.52■■□□□ 1.2
PSMC4-205ENST00000601194 CFDP1Q9UEE9 299 aaPredicted RBP22.52■■□□□ 1.2
PSMC4-205ENST00000601194 MAGI2Q86UL8 1455 aa22.52■■□□□ 1.2
PSMC4-205ENST00000601194 SAMD9LQ8IVG5 1584 aa22.51■■□□□ 1.19
PSMC4-205ENST00000601194 KDM5CP41229 1560 aa22.5■■□□□ 1.19
PSMC4-205ENST00000601194 YEATS2Q9ULM3 1422 aa22.49■■□□□ 1.19
PSMC4-205ENST00000601194 ZFYVE16Q7Z3T8 1539 aa22.49■■□□□ 1.19
PSMC4-205ENST00000601194 AFAP1Q8N556 730 aa22.49■■□□□ 1.19
PSMC4-205ENST00000601194 ZNF777Q9ULD5 760 aaPredicted RBP22.49■■□□□ 1.19
PSMC4-205ENST00000601194 ITSN2Q9NZM3 1697 aa22.49■■□□□ 1.19
PSMC4-205ENST00000601194 TRAPPC8Q9Y2L5 1435 aa22.48■■□□□ 1.19
PSMC4-205ENST00000601194 APLP2Q06481 763 aa22.46■■□□□ 1.19
PSMC4-205ENST00000601194 KIAA1107Q9UPP5 1409 aa22.46■■□□□ 1.19
PSMC4-205ENST00000601194 PLEKHH2Q8IVE3 1493 aa22.46■■□□□ 1.19
PSMC4-205ENST00000601194 SYCP2Q9BX26 1530 aa22.46■■□□□ 1.19
PSMC4-205ENST00000601194 AEBP2Q6ZN18 517 aaPredicted RBP22.43■■□□□ 1.18
PSMC4-205ENST00000601194 HECW2Q9P2P5 1572 aa22.42■■□□□ 1.18
PSMC4-205ENST00000601194 MLH3Q9UHC1 1453 aa22.42■■□□□ 1.18
PSMC4-205ENST00000601194 ZNF644Q9H582 1327 aaPredicted RBP22.42■■□□□ 1.18
PSMC4-205ENST00000601194 HNRNPMP52272 730 aaKnown RBP eCLIP22.41■■□□□ 1.18
PSMC4-205ENST00000601194 ATP10AO60312 1499 aa22.39■■□□□ 1.17
PSMC4-205ENST00000601194 MBD5Q9P267 1494 aa22.37■■□□□ 1.17
PSMC4-205ENST00000601194 CAMSAP2Q08AD1 1489 aa22.36■■□□□ 1.17
PSMC4-205ENST00000601194 C9orf84Q5VXU9 1444 aa22.36■■□□□ 1.17
PSMC4-205ENST00000601194 DIP2CQ9Y2E4 1556 aa22.36■■□□□ 1.17
PSMC4-205ENST00000601194 SIGLEC1Q9BZZ2 1709 aa22.36■■□□□ 1.17
PSMC4-205ENST00000601194 ARID4BQ4LE39 1312 aaPredicted RBP22.35■■□□□ 1.17
PSMC4-205ENST00000601194 MYOM3Q5VTT5 1437 aa22.35■■□□□ 1.17
PSMC4-205ENST00000601194 ABCA6Q8N139 1617 aa22.35■■□□□ 1.17
PSMC4-205ENST00000601194 KIDINS220Q9ULH0 1771 aa22.33■■□□□ 1.17
PSMC4-205ENST00000601194 MYT1LQ9UL68 1186 aa22.33■■□□□ 1.17
PSMC4-205ENST00000601194 SPAG9O60271 1321 aaKnown RBP22.32■■□□□ 1.16
PSMC4-205ENST00000601194 MIA2Q96PC5 1412 aa22.32■■□□□ 1.16
PSMC4-205ENST00000601194 BCORL1Q5H9F3 1711 aa22.32■■□□□ 1.16
PSMC4-205ENST00000601194 ADAMTSL3P82987 1691 aa22.31■■□□□ 1.16
PSMC4-205ENST00000601194 REREQ9P2R6 1566 aa22.31■■□□□ 1.16
PSMC4-205ENST00000601194 INO80Q9ULG1 1556 aaPredicted RBP22.31■■□□□ 1.16
PSMC4-205ENST00000601194 ATP7AQ04656 1500 aa22.3■■□□□ 1.16
PSMC4-205ENST00000601194 CCDC141Q6ZP82 1450 aa22.28■■□□□ 1.16
PSMC4-205ENST00000601194 ARHGEF5Q12774 1597 aa22.26■■□□□ 1.15
PSMC4-205ENST00000601194 RSPH4AQ5TD94 716 aa22.25■■□□□ 1.15
PSMC4-205ENST00000601194 MADDQ8WXG6 1647 aa22.24■■□□□ 1.15
PSMC4-205ENST00000601194 RTEL1-TNFRSF6BF6WH68 1400 aa22.23■■□□□ 1.15
PSMC4-205ENST00000601194 FGD6Q6ZV73 1430 aa22.23■■□□□ 1.15
PSMC4-205ENST00000601194 AGLP35573 1532 aa22.23■■□□□ 1.15
PSMC4-205ENST00000601194 MLECQ14165 292 aa22.21■■□□□ 1.15
PSMC4-205ENST00000601194 PTPRMP28827 1452 aa22.21■■□□□ 1.15
PSMC4-205ENST00000601194 PTPN23Q9H3S7 1636 aa22.2■■□□□ 1.14
PSMC4-205ENST00000601194 A2MP01023 1474 aa22.19■■□□□ 1.14
PSMC4-205ENST00000601194 PLXNC1O60486 1568 aa22.19■■□□□ 1.14
PSMC4-205ENST00000601194 TCOF1Q13428 1488 aaKnown RBP22.18■■□□□ 1.14
PSMC4-205ENST00000601194 RIMS1Q86UR5 1692 aaKnown RBP22.16■■□□□ 1.14
PSMC4-205ENST00000601194 ADGBQ8N7X0 1667 aa22.15■■□□□ 1.14
PSMC4-205ENST00000601194 TSPY4P0CV99 314 aa22.15■■□□□ 1.14
PSMC4-205ENST00000601194 TSPY10P0CW01 314 aa22.15■■□□□ 1.14
PSMC4-205ENST00000601194 MAST1Q9Y2H9 1570 aa22.14■■□□□ 1.13
PSMC4-205ENST00000601194 FER1L4A9Z1Z3 1794 aa22.13■■□□□ 1.13
PSMC4-205ENST00000601194 ABCC5O15440 1437 aa22.12■■□□□ 1.13
PSMC4-205ENST00000601194 DHX29Q7Z478 1369 aaKnown RBP22.11■■□□□ 1.13
PSMC4-205ENST00000601194 SHANK2Q9UPX8 1470 aa22.09■■□□□ 1.13
PSMC4-205ENST00000601194 PPARGC1BQ86YN6 1023 aaKnown RBP22.09■■□□□ 1.13
PSMC4-205ENST00000601194 DNMT1P26358 1616 aaKnown RBP22.09■■□□□ 1.13
PSMC4-205ENST00000601194 DAPK1P53355 1430 aa22.08■■□□□ 1.13
PSMC4-205ENST00000601194 CROCC2H7BZ55 1655 aa22.07■■□□□ 1.12
PSMC4-205ENST00000601194 FAM50AQ14320 339 aaKnown RBP22.03■■□□□ 1.12
PSMC4-205ENST00000601194 CNTLNQ9NXG0 1405 aa22.03■■□□□ 1.12
PSMC4-205ENST00000601194 GGT6Q6P531 493 aa22■■□□□ 1.11
PSMC4-205ENST00000601194 ESF1Q9H501 851 aaKnown RBP22■■□□□ 1.11
PSMC4-205ENST00000601194 KIF15Q9NS87 1388 aa21.99■■□□□ 1.11
PSMC4-205ENST00000601194 KIF3BO15066 747 aa21.99■■□□□ 1.11
PSMC4-205ENST00000601194 PLPPR3Q6T4P5 718 aa21.99■■□□□ 1.11
PSMC4-205ENST00000601194 DUOX2Q9NRD8 1548 aa21.98■■□□□ 1.11
PSMC4-205ENST00000601194 CEBPAP49715 358 aaPredicted RBP21.98■■□□□ 1.11
PSMC4-205ENST00000601194 PPP6R1Q9UPN7 881 aa21.97■■□□□ 1.11
PSMC4-205ENST00000601194 ADGRL2O95490 1459 aa21.96■■□□□ 1.11
PSMC4-205ENST00000601194 MROH2AA6NES4 1674 aa21.95■■□□□ 1.1
PSMC4-205ENST00000601194 C3P01024 1663 aa21.95■■□□□ 1.1
PSMC4-205ENST00000601194 RRP7BPQ9NSQ0 103 aa21.95■■□□□ 1.1
PSMC4-205ENST00000601194 CHIC2Q9UKJ5 165 aa21.95■■□□□ 1.1
PSMC4-205ENST00000601194 ANKRD30AQ9BXX3 1397 aa21.95■■□□□ 1.1
PSMC4-205ENST00000601194 NCOA1Q15788 1441 aa21.95■■□□□ 1.1
PSMC4-205ENST00000601194 EIF2AK4Q9P2K8 1649 aaKnown RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms