RNA–Protein interactions for RNA: ENST00000601065.5

SNRNP70-209, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 3

Gene SNRNP70, Length 1,757 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-209ENST00000601065 TCOF1Q13428 1488 aaKnown RBP33.61■■■□□ 2.97
SNRNP70-209ENST00000601065 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.6■■■□□ 2.976e-8■□□□□ 11.1
SNRNP70-209ENST00000601065 FAM50AQ14320 339 aaKnown RBP33.59■■■□□ 2.97
SNRNP70-209ENST00000601065 ARHGAP5Q13017 1502 aa33.58■■■□□ 2.97
SNRNP70-209ENST00000601065 ARAP3Q8WWN8 1544 aa33.58■■■□□ 2.97
SNRNP70-209ENST00000601065 CD109Q6YHK3 1445 aa33.55■■■□□ 2.96
SNRNP70-209ENST00000601065 ZNF644Q9H582 1327 aaPredicted RBP33.54■■■□□ 2.96
SNRNP70-209ENST00000601065 MAP3K4Q9Y6R4 1608 aa33.54■■■□□ 2.96
SNRNP70-209ENST00000601065 FAM69CQ0P6D2 419 aa33.54■■■□□ 2.96
SNRNP70-209ENST00000601065 CAMSAP2Q08AD1 1489 aa33.54■■■□□ 2.96
SNRNP70-209ENST00000601065 ZNF777Q9ULD5 760 aaPredicted RBP33.53■■■□□ 2.96
SNRNP70-209ENST00000601065 SAMD9LQ8IVG5 1584 aa33.5■■■□□ 2.95
SNRNP70-209ENST00000601065 KIF13AQ9H1H9 1805 aa33.5■■■□□ 2.95
SNRNP70-209ENST00000601065 EFCAB2Q5VUJ9 269 aa33.48■■■□□ 2.95
SNRNP70-209ENST00000601065 FANCAO15360 1455 aa33.46■■■□□ 2.95
SNRNP70-209ENST00000601065 ITGAEP38570 1179 aa33.4■■■□□ 2.94
SNRNP70-209ENST00000601065 PLEKHH2Q8IVE3 1493 aa33.39■■■□□ 2.94
SNRNP70-209ENST00000601065 DNMT1P26358 1616 aaKnown RBP33.38■■■□□ 2.93
SNRNP70-209ENST00000601065 CFAP74Q9C0B2 1584 aa33.38■■■□□ 2.93
SNRNP70-209ENST00000601065 KIAA1107Q9UPP5 1409 aa33.38■■■□□ 2.93
SNRNP70-209ENST00000601065 ABCC1P33527 1531 aa33.37■■■□□ 2.93
SNRNP70-209ENST00000601065 MBD5Q9P267 1494 aa33.36■■■□□ 2.93
SNRNP70-209ENST00000601065 SYCP2Q9BX26 1530 aa33.36■■■□□ 2.93
SNRNP70-209ENST00000601065 DAPK1P53355 1430 aa33.34■■■□□ 2.93
SNRNP70-209ENST00000601065 ABCC5O15440 1437 aa33.34■■■□□ 2.93
SNRNP70-209ENST00000601065 PTPRKQ15262 1439 aa33.34■■■□□ 2.93
SNRNP70-209ENST00000601065 PPRC1Q5VV67 1664 aaKnown RBP33.34■■■□□ 2.93
SNRNP70-209ENST00000601065 TSPOAP1O95153 1857 aa33.33■■■□□ 2.93
SNRNP70-209ENST00000601065 ARHGEF5Q12774 1597 aa33.33■■■□□ 2.93
SNRNP70-209ENST00000601065 AKNAQ7Z591 1439 aa33.33■■■□□ 2.93
SNRNP70-209ENST00000601065 HNRNPMP52272 730 aaKnown RBP eCLIP33.33■■■□□ 2.933e-8■■□□□ 13.9
SNRNP70-209ENST00000601065 ARHGEF12Q9NZN5 1544 aa33.32■■■□□ 2.93
SNRNP70-209ENST00000601065 NEO1Q92859 1461 aa33.32■■■□□ 2.92
SNRNP70-209ENST00000601065 ADGRL1O94910 1474 aa33.3■■■□□ 2.92
SNRNP70-209ENST00000601065 CROCC2H7BZ55 1655 aa33.28■■■□□ 2.92
SNRNP70-209ENST00000601065 CCDC141Q6ZP82 1450 aa33.27■■■□□ 2.92
SNRNP70-209ENST00000601065 TEX14Q8IWB6 1497 aa33.27■■■□□ 2.92
SNRNP70-209ENST00000601065 RSPH4AQ5TD94 716 aa33.26■■■□□ 2.92
SNRNP70-209ENST00000601065 SCAPERQ9BY12 1400 aa33.24■■■□□ 2.91
SNRNP70-209ENST00000601065 TRHP20396 242 aaPredicted RBP33.23■■■□□ 2.91
SNRNP70-209ENST00000601065 TRAPPC8Q9Y2L5 1435 aa33.21■■■□□ 2.91
SNRNP70-209ENST00000601065 SHANK2Q9UPX8 1470 aa33.21■■■□□ 2.91
SNRNP70-209ENST00000601065 CHIC2Q9UKJ5 165 aa33.19■■■□□ 2.9
SNRNP70-209ENST00000601065 TSPY4P0CV99 314 aa33.17■■■□□ 2.9
SNRNP70-209ENST00000601065 TSPY10P0CW01 314 aa33.17■■■□□ 2.9
SNRNP70-209ENST00000601065 C9orf84Q5VXU9 1444 aa33.16■■■□□ 2.9
SNRNP70-209ENST00000601065 ROCK1Q13464 1354 aa33.14■■■□□ 2.9
SNRNP70-209ENST00000601065 AFAP1Q8N556 730 aa33.14■■■□□ 2.9
SNRNP70-209ENST00000601065 ADGBQ8N7X0 1667 aa33.13■■■□□ 2.89
SNRNP70-209ENST00000601065 MAST1Q9Y2H9 1570 aa33.13■■■□□ 2.89
SNRNP70-209ENST00000601065 ADGRL2O95490 1459 aa33.13■■■□□ 2.89
SNRNP70-209ENST00000601065 POGZQ7Z3K3 1410 aa33.12■■■□□ 2.89
SNRNP70-209ENST00000601065 ZNF518AQ6AHZ1 1483 aa33.12■■■□□ 2.89
SNRNP70-209ENST00000601065 DENND4BO75064 1496 aaPredicted RBP33.11■■■□□ 2.89
SNRNP70-209ENST00000601065 HFM1A2PYH4 1435 aa33.09■■■□□ 2.89
SNRNP70-209ENST00000601065 NCOA1Q15788 1441 aa33.09■■■□□ 2.89
SNRNP70-209ENST00000601065 RRP7BPQ9NSQ0 103 aa33.06■■■□□ 2.88
SNRNP70-209ENST00000601065 KDM5CP41229 1560 aa33.06■■■□□ 2.88
SNRNP70-209ENST00000601065 ANKRD30AQ9BXX3 1397 aa33.06■■■□□ 2.88
SNRNP70-209ENST00000601065 RICTORQ6R327 1708 aa33.06■■■□□ 2.88
SNRNP70-209ENST00000601065 NAIPQ13075 1403 aa33.05■■■□□ 2.88
SNRNP70-209ENST00000601065 SPAG9O60271 1321 aaKnown RBP33.04■■■□□ 2.88
SNRNP70-209ENST00000601065 SETD5Q9C0A6 1442 aa33.03■■■□□ 2.88
SNRNP70-209ENST00000601065 ZFYVE16Q7Z3T8 1539 aa33.03■■■□□ 2.88
SNRNP70-209ENST00000601065 RTEL1-TNFRSF6BF6WH68 1400 aa33.03■■■□□ 2.88
SNRNP70-209ENST00000601065 RAPGEF3O95398 923 aa33.03■■■□□ 2.88
SNRNP70-209ENST00000601065 GCC2Q8IWJ2 1684 aa33.03■■■□□ 2.88
SNRNP70-209ENST00000601065 INO80Q9ULG1 1556 aaPredicted RBP33.02■■■□□ 2.88
SNRNP70-209ENST00000601065 PLXNC1O60486 1568 aa33■■■□□ 2.87
SNRNP70-209ENST00000601065 FRMPD1Q5SYB0 1578 aa33■■■□□ 2.87
SNRNP70-209ENST00000601065 ATP7AQ04656 1500 aa32.99■■■□□ 2.87
SNRNP70-209ENST00000601065 COL17A1Q9UMD9 1497 aaPredicted RBP32.96■■■□□ 2.87
SNRNP70-209ENST00000601065 RAB3GAP2Q9H2M9 1393 aa32.96■■■□□ 2.87
SNRNP70-209ENST00000601065 MLH3Q9UHC1 1453 aa32.96■■■□□ 2.87
SNRNP70-209ENST00000601065 KIF15Q9NS87 1388 aa32.96■■■□□ 2.87
SNRNP70-209ENST00000601065 HECW2Q9P2P5 1572 aa32.95■■■□□ 2.87
SNRNP70-209ENST00000601065 KIDINS220Q9ULH0 1771 aa32.95■■■□□ 2.87
SNRNP70-209ENST00000601065 ZMYM4Q5VZL5 1548 aa32.91■■■□□ 2.86
SNRNP70-209ENST00000601065 MYT1LQ9UL68 1186 aa32.9■■■□□ 2.86
SNRNP70-209ENST00000601065 KDM6BO15054 1643 aa32.89■■■□□ 2.86
SNRNP70-209ENST00000601065 HRCP23327 699 aa32.87■■■□□ 2.85
SNRNP70-209ENST00000601065 ANKRD50Q9ULJ7 1429 aa32.87■■■□□ 2.85
SNRNP70-209ENST00000601065 DUOX2Q9NRD8 1548 aa32.86■■■□□ 2.85
SNRNP70-209ENST00000601065 MAGI2Q86UL8 1455 aa32.82■■■□□ 2.84
SNRNP70-209ENST00000601065 ABCA6Q8N139 1617 aa32.82■■■□□ 2.84
SNRNP70-209ENST00000601065 ERBINQ96RT1 1412 aa32.78■■■□□ 2.84
SNRNP70-209ENST00000601065 YEATS2Q9ULM3 1422 aa32.78■■■□□ 2.84
SNRNP70-209ENST00000601065 DIP2CQ9Y2E4 1556 aa32.78■■■□□ 2.84
SNRNP70-209ENST00000601065 DHX29Q7Z478 1369 aaKnown RBP32.75■■■□□ 2.83
SNRNP70-209ENST00000601065 A2MP01023 1474 aa32.73■■■□□ 2.83
SNRNP70-209ENST00000601065 ACIN1Q9UKV3 1341 aaKnown RBP32.69■■■□□ 2.82
SNRNP70-209ENST00000601065 EIF2AK4Q9P2K8 1649 aaKnown RBP32.68■■■□□ 2.82
SNRNP70-209ENST00000601065 ARHGEF40Q8TER5 1519 aa32.68■■■□□ 2.82
SNRNP70-209ENST00000601065 ATP10AO60312 1499 aa32.65■■■□□ 2.82
SNRNP70-209ENST00000601065 TRIM52Q96A61 297 aa32.64■■■□□ 2.82
SNRNP70-209ENST00000601065 DHX57Q6P158 1386 aaKnown RBP32.64■■■□□ 2.82
SNRNP70-209ENST00000601065 UNC13BO14795 1591 aa32.62■■■□□ 2.81
SNRNP70-209ENST00000601065 REREQ9P2R6 1566 aa32.62■■■□□ 2.81
SNRNP70-209ENST00000601065 CCER1Q8TC90 406 aaPredicted RBP32.6■■■□□ 2.81
SNRNP70-209ENST00000601065 BCORL1Q5H9F3 1711 aa32.59■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms