RNA–Protein interactions for RNA: ENST00000600380.1

FARP1-230, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-230ENST00000600380 AKNAQ7Z591 1439 aa18.49■□□□□ 0.55
FARP1-230ENST00000600380 NEO1Q92859 1461 aa18.48■□□□□ 0.55
FARP1-230ENST00000600380 PREX2Q70Z35 1606 aa18.48■□□□□ 0.55
FARP1-230ENST00000600380 ARHGAP5Q13017 1502 aa18.48■□□□□ 0.55
FARP1-230ENST00000600380 ARAP3Q8WWN8 1544 aa18.48■□□□□ 0.55
FARP1-230ENST00000600380 ZNF644Q9H582 1327 aaPredicted RBP18.48■□□□□ 0.55
FARP1-230ENST00000600380 PHLDB1Q86UU1 1377 aa18.47■□□□□ 0.55
FARP1-230ENST00000600380 RAPGEF3O95398 923 aa18.45■□□□□ 0.54
FARP1-230ENST00000600380 CFDP1Q9UEE9 299 aaPredicted RBP18.45■□□□□ 0.54
FARP1-230ENST00000600380 ZNF777Q9ULD5 760 aaPredicted RBP18.45■□□□□ 0.54
FARP1-230ENST00000600380 ARHGEF12Q9NZN5 1544 aa18.44■□□□□ 0.54
FARP1-230ENST00000600380 KDM6BO15054 1643 aa18.43■□□□□ 0.54
FARP1-230ENST00000600380 SCAPERQ9BY12 1400 aa18.41■□□□□ 0.54
FARP1-230ENST00000600380 ADGRL1O94910 1474 aa18.41■□□□□ 0.54
FARP1-230ENST00000600380 SAMD9LQ8IVG5 1584 aa18.41■□□□□ 0.54
FARP1-230ENST00000600380 MYOM3Q5VTT5 1437 aa18.4■□□□□ 0.54
FARP1-230ENST00000600380 HNRNPMP52272 730 aaKnown RBP eCLIP18.39■□□□□ 0.53
FARP1-230ENST00000600380 FRMPD1Q5SYB0 1578 aa18.38■□□□□ 0.53
FARP1-230ENST00000600380 CFAP74Q9C0B2 1584 aa18.38■□□□□ 0.53
FARP1-230ENST00000600380 TRAPPC8Q9Y2L5 1435 aa18.38■□□□□ 0.53
FARP1-230ENST00000600380 DENND4BO75064 1496 aaPredicted RBP18.38■□□□□ 0.53
FARP1-230ENST00000600380 AFAP1Q8N556 730 aa18.37■□□□□ 0.53
FARP1-230ENST00000600380 ABCC1P33527 1531 aa18.37■□□□□ 0.53
FARP1-230ENST00000600380 ITSN2Q9NZM3 1697 aa18.36■□□□□ 0.53
FARP1-230ENST00000600380 POGZQ7Z3K3 1410 aa18.35■□□□□ 0.53
FARP1-230ENST00000600380 RICTORQ6R327 1708 aa18.34■□□□□ 0.53
FARP1-230ENST00000600380 SYCP2Q9BX26 1530 aa18.33■□□□□ 0.53
FARP1-230ENST00000600380 CAMSAP2Q08AD1 1489 aa18.33■□□□□ 0.53
FARP1-230ENST00000600380 MBD5Q9P267 1494 aa18.33■□□□□ 0.53
FARP1-230ENST00000600380 FGD6Q6ZV73 1430 aa18.33■□□□□ 0.53
FARP1-230ENST00000600380 MIA2Q96PC5 1412 aa18.33■□□□□ 0.53
FARP1-230ENST00000600380 KIAA1107Q9UPP5 1409 aa18.32■□□□□ 0.52
FARP1-230ENST00000600380 PLEKHH2Q8IVE3 1493 aa18.29■□□□□ 0.52
FARP1-230ENST00000600380 PTPN23Q9H3S7 1636 aa18.28■□□□□ 0.52
FARP1-230ENST00000600380 TCOF1Q13428 1488 aaKnown RBP18.27■□□□□ 0.52
FARP1-230ENST00000600380 YEATS2Q9ULM3 1422 aa18.27■□□□□ 0.52
FARP1-230ENST00000600380 ZNF518AQ6AHZ1 1483 aa18.26■□□□□ 0.51
FARP1-230ENST00000600380 KDM5CP41229 1560 aa18.26■□□□□ 0.51
FARP1-230ENST00000600380 ZMYM4Q5VZL5 1548 aa18.26■□□□□ 0.51
FARP1-230ENST00000600380 FAM50AQ14320 339 aaKnown RBP18.24■□□□□ 0.51
FARP1-230ENST00000600380 ABCC5O15440 1437 aa18.23■□□□□ 0.51
FARP1-230ENST00000600380 SPAG9O60271 1321 aaKnown RBP18.23■□□□□ 0.51
FARP1-230ENST00000600380 ARHGEF5Q12774 1597 aa18.21■□□□□ 0.51
FARP1-230ENST00000600380 CCDC141Q6ZP82 1450 aa18.21■□□□□ 0.51
FARP1-230ENST00000600380 MLH3Q9UHC1 1453 aa18.21■□□□□ 0.51
FARP1-230ENST00000600380 MAGI2Q86UL8 1455 aa18.2■□□□□ 0.5
FARP1-230ENST00000600380 KIDINS220Q9ULH0 1771 aa18.19■□□□□ 0.5
FARP1-230ENST00000600380 ZFYVE16Q7Z3T8 1539 aa18.19■□□□□ 0.5
FARP1-230ENST00000600380 RRBP1Q9P2E9 1410 aaKnown RBP18.19■□□□□ 0.5
FARP1-230ENST00000600380 ARHGEF40Q8TER5 1519 aa18.18■□□□□ 0.5
FARP1-230ENST00000600380 HECW2Q9P2P5 1572 aa18.18■□□□□ 0.5
FARP1-230ENST00000600380 PTPRKQ15262 1439 aa18.18■□□□□ 0.5
FARP1-230ENST00000600380 RSPH4AQ5TD94 716 aa18.18■□□□□ 0.5
FARP1-230ENST00000600380 MYT1LQ9UL68 1186 aa18.18■□□□□ 0.5
FARP1-230ENST00000600380 DAPK1P53355 1430 aa18.17■□□□□ 0.5
FARP1-230ENST00000600380 INO80Q9ULG1 1556 aaPredicted RBP18.17■□□□□ 0.5
FARP1-230ENST00000600380 SIGLEC1Q9BZZ2 1709 aa18.16■□□□□ 0.5
FARP1-230ENST00000600380 ATP7AQ04656 1500 aa18.16■□□□□ 0.5
FARP1-230ENST00000600380 DIP2CQ9Y2E4 1556 aa18.16■□□□□ 0.5
FARP1-230ENST00000600380 ABCA6Q8N139 1617 aa18.16■□□□□ 0.5
FARP1-230ENST00000600380 CHIC2Q9UKJ5 165 aa18.15■□□□□ 0.5
FARP1-230ENST00000600380 DNMT1P26358 1616 aaKnown RBP18.15■□□□□ 0.5
FARP1-230ENST00000600380 C9orf84Q5VXU9 1444 aa18.15■□□□□ 0.5
FARP1-230ENST00000600380 ATP10AO60312 1499 aa18.14■□□□□ 0.5
FARP1-230ENST00000600380 TSPY4P0CV99 314 aa18.14■□□□□ 0.49
FARP1-230ENST00000600380 TSPY10P0CW01 314 aa18.14■□□□□ 0.49
FARP1-230ENST00000600380 RTEL1-TNFRSF6BF6WH68 1400 aa18.14■□□□□ 0.49
FARP1-230ENST00000600380 ITGAEP38570 1179 aa18.12■□□□□ 0.49
FARP1-230ENST00000600380 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.12■□□□□ 0.49
FARP1-230ENST00000600380 MAST1Q9Y2H9 1570 aa18.11■□□□□ 0.49
FARP1-230ENST00000600380 CROCC2H7BZ55 1655 aa18.09■□□□□ 0.49
FARP1-230ENST00000600380 SHANK2Q9UPX8 1470 aa18.09■□□□□ 0.49
FARP1-230ENST00000600380 RRP7BPQ9NSQ0 103 aa18.08■□□□□ 0.48
FARP1-230ENST00000600380 A2MP01023 1474 aa18.07■□□□□ 0.48
FARP1-230ENST00000600380 ARID4BQ4LE39 1312 aaPredicted RBP18.06■□□□□ 0.48
FARP1-230ENST00000600380 NCOA1Q15788 1441 aa18.06■□□□□ 0.48
FARP1-230ENST00000600380 ADGBQ8N7X0 1667 aa18.06■□□□□ 0.48
FARP1-230ENST00000600380 DHX29Q7Z478 1369 aaKnown RBP18.05■□□□□ 0.48
FARP1-230ENST00000600380 KDM4FA0A1W2PPD8 638 aa18.05■□□□□ 0.48
FARP1-230ENST00000600380 REREQ9P2R6 1566 aa18.04■□□□□ 0.48
FARP1-230ENST00000600380 MLECQ14165 292 aa18.04■□□□□ 0.48
FARP1-230ENST00000600380 PLXNC1O60486 1568 aa18.04■□□□□ 0.48
FARP1-230ENST00000600380 KIF15Q9NS87 1388 aa18.04■□□□□ 0.48
FARP1-230ENST00000600380 ADGRL2O95490 1459 aa18.03■□□□□ 0.48
FARP1-230ENST00000600380 AGLP35573 1532 aa18.02■□□□□ 0.47
FARP1-230ENST00000600380 ANKRD30AQ9BXX3 1397 aa18.02■□□□□ 0.47
FARP1-230ENST00000600380 ROCK1Q13464 1354 aa17.99■□□□□ 0.47
FARP1-230ENST00000600380 KIF3BO15066 747 aa17.98■□□□□ 0.47
FARP1-230ENST00000600380 BCORL1Q5H9F3 1711 aa17.98■□□□□ 0.47
FARP1-230ENST00000600380 DUOX2Q9NRD8 1548 aa17.98■□□□□ 0.47
FARP1-230ENST00000600380 ADAMTSL3P82987 1691 aa17.96■□□□□ 0.47
FARP1-230ENST00000600380 GGT6Q6P531 493 aa17.95■□□□□ 0.46
FARP1-230ENST00000600380 NAIPQ13075 1403 aa17.92■□□□□ 0.46
FARP1-230ENST00000600380 ANKRD50Q9ULJ7 1429 aa17.92■□□□□ 0.46
FARP1-230ENST00000600380 MADDQ8WXG6 1647 aa17.91■□□□□ 0.46
FARP1-230ENST00000600380 ERBINQ96RT1 1412 aa17.91■□□□□ 0.46
FARP1-230ENST00000600380 MROH1Q8NDA8 1641 aa17.9■□□□□ 0.46
FARP1-230ENST00000600380 HFM1A2PYH4 1435 aa17.88■□□□□ 0.45
FARP1-230ENST00000600380 RNF17Q9BXT8 1623 aaKnown RBP17.87■□□□□ 0.45
FARP1-230ENST00000600380 EIF2AK4Q9P2K8 1649 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms