RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 PLPPR3Q6T4P5 718 aa30.96■■■□□ 2.55
FARP1-229ENST00000600190 MAGI2Q86UL8 1455 aa30.95■■■□□ 2.55
FARP1-229ENST00000600190 EFCAB2Q5VUJ9 269 aa30.95■■■□□ 2.55
FARP1-229ENST00000600190 MYO5CQ9NQX4 1742 aa30.93■■■□□ 2.54
FARP1-229ENST00000600190 MLECQ14165 292 aa30.92■■■□□ 2.54
FARP1-229ENST00000600190 SIGLEC1Q9BZZ2 1709 aa30.91■■■□□ 2.54
FARP1-229ENST00000600190 PCF11O94913 1555 aaKnown RBP30.91■■■□□ 2.54
FARP1-229ENST00000600190 KIF14Q15058 1648 aa30.91■■■□□ 2.54
FARP1-229ENST00000600190 TROQ12816 1431 aaPredicted RBP30.88■■■□□ 2.53
FARP1-229ENST00000600190 LMTK3Q96Q04 1460 aa30.88■■■□□ 2.53
FARP1-229ENST00000600190 CLIP1P30622 1438 aa30.85■■■□□ 2.53
FARP1-229ENST00000600190 LRRIQ1Q96JM4 1722 aa30.84■■■□□ 2.53
FARP1-229ENST00000600190 ARHGAP5Q13017 1502 aa30.83■■■□□ 2.53
FARP1-229ENST00000600190 ATP10AO60312 1499 aa30.82■■■□□ 2.52
FARP1-229ENST00000600190 HSPA2P54652 639 aa30.79■■■□□ 2.52
FARP1-229ENST00000600190 AFAP1Q8N556 730 aa30.78■■■□□ 2.52
FARP1-229ENST00000600190 MYT1LQ9UL68 1186 aa30.78■■■□□ 2.52
FARP1-229ENST00000600190 C9orf84Q5VXU9 1444 aa30.78■■■□□ 2.52
FARP1-229ENST00000600190 FER1L4A9Z1Z3 1794 aa30.77■■■□□ 2.52
FARP1-229ENST00000600190 ZNF518AQ6AHZ1 1483 aa30.76■■■□□ 2.52
FARP1-229ENST00000600190 FBXO41Q8TF61 875 aa30.76■■■□□ 2.51
FARP1-229ENST00000600190 CASKIN1Q8WXD9 1431 aa30.73■■■□□ 2.51
FARP1-229ENST00000600190 CCDC18Q5T9S5 1454 aa30.7■■■□□ 2.51
FARP1-229ENST00000600190 CDC42BPBQ9Y5S2 1711 aa30.7■■■□□ 2.51
FARP1-229ENST00000600190 ARHGEF12Q9NZN5 1544 aa30.69■■■□□ 2.5
FARP1-229ENST00000600190 KDM5CP41229 1560 aa30.68■■■□□ 2.5
FARP1-229ENST00000600190 CEBPAP49715 358 aaPredicted RBP30.65■■■□□ 2.5
FARP1-229ENST00000600190 PREX2Q70Z35 1606 aa30.63■■■□□ 2.49
FARP1-229ENST00000600190 DIP2CQ9Y2E4 1556 aa30.61■■■□□ 2.49
FARP1-229ENST00000600190 TRAPPC8Q9Y2L5 1435 aa30.59■■■□□ 2.49
FARP1-229ENST00000600190 ABCC1P33527 1531 aa30.58■■■□□ 2.49
FARP1-229ENST00000600190 FYCO1Q9BQS8 1478 aa30.58■■■□□ 2.49
FARP1-229ENST00000600190 MLH3Q9UHC1 1453 aa30.58■■■□□ 2.49
FARP1-229ENST00000600190 ABCA6Q8N139 1617 aa30.56■■■□□ 2.48
FARP1-229ENST00000600190 ZNF777Q9ULD5 760 aaPredicted RBP30.55■■■□□ 2.48
FARP1-229ENST00000600190 CDC42BPAQ5VT25 1732 aa30.55■■■□□ 2.48
FARP1-229ENST00000600190 ITSN2Q9NZM3 1697 aa30.55■■■□□ 2.48
FARP1-229ENST00000600190 PREX1Q8TCU6 1659 aa30.54■■■□□ 2.48
FARP1-229ENST00000600190 REREQ9P2R6 1566 aa30.54■■■□□ 2.48
FARP1-229ENST00000600190 ESF1Q9H501 851 aaKnown RBP30.51■■■□□ 2.47
FARP1-229ENST00000600190 KIDINS220Q9ULH0 1771 aa30.46■■■□□ 2.47
FARP1-229ENST00000600190 AGLP35573 1532 aa30.45■■■□□ 2.47
FARP1-229ENST00000600190 GPATCH8Q9UKJ3 1502 aaKnown RBP30.44■■■□□ 2.46
FARP1-229ENST00000600190 UHRF1BP1Q6BDS2 1440 aa30.44■■■□□ 2.46
FARP1-229ENST00000600190 HNRNPMP52272 730 aaKnown RBP eCLIP30.43■■■□□ 2.46
FARP1-229ENST00000600190 CERKQ8TCT0 537 aa30.43■■■□□ 2.46
FARP1-229ENST00000600190 SAMD9LQ8IVG5 1584 aa30.42■■■□□ 2.46
FARP1-229ENST00000600190 C3P01024 1663 aa30.41■■■□□ 2.46
FARP1-229ENST00000600190 SETD1BQ9UPS6 1966 aaKnown RBP30.41■■■□□ 2.46
FARP1-229ENST00000600190 SYCP2Q9BX26 1530 aa30.4■■■□□ 2.46
FARP1-229ENST00000600190 CFDP1Q9UEE9 299 aaPredicted RBP30.39■■■□□ 2.46
FARP1-229ENST00000600190 SPAG9O60271 1321 aaKnown RBP30.39■■■□□ 2.46
FARP1-229ENST00000600190 DMRT2Q9Y5R5 561 aa30.37■■■□□ 2.45
FARP1-229ENST00000600190 CCNB3Q8WWL7 1395 aa30.37■■■□□ 2.45
FARP1-229ENST00000600190 MTUS2Q5JR59 1369 aa30.35■■■□□ 2.45
FARP1-229ENST00000600190 STRCQ7RTU9 1775 aa30.35■■■□□ 2.45
FARP1-229ENST00000600190 CNTLNQ9NXG0 1405 aa30.32■■■□□ 2.44
FARP1-229ENST00000600190 KIAA1107Q9UPP5 1409 aa30.3■■■□□ 2.44
FARP1-229ENST00000600190 PLEKHH2Q8IVE3 1493 aa30.3■■■□□ 2.44
FARP1-229ENST00000600190 SUPT6HQ7KZ85 1726 aaKnown RBP30.29■■■□□ 2.44
FARP1-229ENST00000600190 ATP7AQ04656 1500 aa30.27■■■□□ 2.44
FARP1-229ENST00000600190 ZMYM3Q14202 1370 aa30.23■■■□□ 2.43
FARP1-229ENST00000600190 ZNF644Q9H582 1327 aaPredicted RBP30.22■■■□□ 2.43
FARP1-229ENST00000600190 INO80Q9ULG1 1556 aaPredicted RBP30.22■■■□□ 2.43
FARP1-229ENST00000600190 A2MP01023 1474 aa30.21■■■□□ 2.43
FARP1-229ENST00000600190 MROH2AA6NES4 1674 aa30.2■■■□□ 2.42
FARP1-229ENST00000600190 GGT6Q6P531 493 aa30.19■■■□□ 2.42
FARP1-229ENST00000600190 TIAM1Q13009 1591 aa30.19■■■□□ 2.42
FARP1-229ENST00000600190 EHBP1L1Q8N3D4 1523 aa30.18■■■□□ 2.42
FARP1-229ENST00000600190 PTPRTO14522 1441 aa30.18■■■□□ 2.42
FARP1-229ENST00000600190 CEP162Q5TB80 1403 aa30.18■■■□□ 2.42
FARP1-229ENST00000600190 PLXNC1O60486 1568 aa30.17■■■□□ 2.42
FARP1-229ENST00000600190 NPATQ14207 1427 aa30.17■■■□□ 2.42
FARP1-229ENST00000600190 CLTCQ00610 1675 aaKnown RBP30.16■■■□□ 2.42
FARP1-229ENST00000600190 NCOA1Q15788 1441 aa30.13■■■□□ 2.41
FARP1-229ENST00000600190 MBD5Q9P267 1494 aa30.12■■■□□ 2.41
FARP1-229ENST00000600190 ADGBQ8N7X0 1667 aa30.11■■■□□ 2.41
FARP1-229ENST00000600190 CAMSAP1Q5T5Y3 1602 aa30.1■■■□□ 2.41
FARP1-229ENST00000600190 PPP6R1Q9UPN7 881 aa30.06■■■□□ 2.4
FARP1-229ENST00000600190 RTEL1-TNFRSF6BF6WH68 1400 aa30.05■■■□□ 2.4
FARP1-229ENST00000600190 PTPRKQ15262 1439 aa30.05■■■□□ 2.4
FARP1-229ENST00000600190 NCKAP5LQ9HCH0 1330 aa30.04■■■□□ 2.4
FARP1-229ENST00000600190 NCOA2Q15596 1464 aa30.03■■■□□ 2.4
FARP1-229ENST00000600190 DHX29Q7Z478 1369 aaKnown RBP30.02■■■□□ 2.4
FARP1-229ENST00000600190 LTBP4Q8N2S1 1624 aa30.01■■■□□ 2.39
FARP1-229ENST00000600190 MYO3AQ8NEV4 1616 aa30.01■■■□□ 2.39
FARP1-229ENST00000600190 CAMSAP2Q08AD1 1489 aa29.98■■■□□ 2.39
FARP1-229ENST00000600190 CCDC141Q6ZP82 1450 aa29.98■■■□□ 2.39
FARP1-229ENST00000600190 KIF3BO15066 747 aa29.97■■■□□ 2.39
FARP1-229ENST00000600190 CEP170BQ9Y4F5 1589 aaPredicted RBP29.97■■■□□ 2.39
FARP1-229ENST00000600190 ZNF142P52746 1687 aaPredicted RBP29.96■■■□□ 2.39
FARP1-229ENST00000600190 RSPH4AQ5TD94 716 aa29.96■■■□□ 2.39
FARP1-229ENST00000600190 PKD2Q13563 968 aa29.94■■■□□ 2.38
FARP1-229ENST00000600190 LOC105371045A0A1W2PR82 267 aa29.93■■■□□ 2.38
FARP1-229ENST00000600190 PLA2R1Q13018 1463 aa29.93■■■□□ 2.38
FARP1-229ENST00000600190 ZNF335Q9H4Z2 1342 aaPredicted RBP29.9■■■□□ 2.38
FARP1-229ENST00000600190 TSPY4P0CV99 314 aa29.89■■■□□ 2.38
FARP1-229ENST00000600190 TSPY10P0CW01 314 aa29.89■■■□□ 2.38
FARP1-229ENST00000600190 IQSEC2Q5JU85 1478 aa29.88■■■□□ 2.37
FARP1-229ENST00000600190 FBXO31Q5XUX0 539 aaPredicted RBP29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms