RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 EFCAB2Q5VUJ9 269 aa28.38■■■□□ 2.13
SMG9-210ENST00000600097 LMTK3Q96Q04 1460 aa28.38■■■□□ 2.13
SMG9-210ENST00000600097 RIMS1Q86UR5 1692 aaKnown RBP28.37■■■□□ 2.13
SMG9-210ENST00000600097 CHIC1Q5VXU3 224 aa28.36■■■□□ 2.13
SMG9-210ENST00000600097 FBXO41Q8TF61 875 aa28.35■■■□□ 2.13
SMG9-210ENST00000600097 TROQ12816 1431 aaPredicted RBP28.3■■■□□ 2.12
SMG9-210ENST00000600097 MYO5CQ9NQX4 1742 aa28.29■■■□□ 2.12
SMG9-210ENST00000600097 ATP10AO60312 1499 aa28.28■■■□□ 2.12
SMG9-210ENST00000600097 CLIP1P30622 1438 aa28.28■■■□□ 2.12
SMG9-210ENST00000600097 MLECQ14165 292 aa28.28■■■□□ 2.12
SMG9-210ENST00000600097 KIF14Q15058 1648 aa28.28■■■□□ 2.12
SMG9-210ENST00000600097 SIGLEC1Q9BZZ2 1709 aa28.27■■■□□ 2.12
SMG9-210ENST00000600097 PLPPR3Q6T4P5 718 aa28.26■■■□□ 2.11
SMG9-210ENST00000600097 C9orf84Q5VXU9 1444 aa28.26■■■□□ 2.11
SMG9-210ENST00000600097 ZNF518AQ6AHZ1 1483 aa28.24■■■□□ 2.11
SMG9-210ENST00000600097 HSPA2P54652 639 aa28.23■■■□□ 2.11
SMG9-210ENST00000600097 ARHGAP5Q13017 1502 aa28.22■■■□□ 2.11
SMG9-210ENST00000600097 ARHGEF12Q9NZN5 1544 aa28.19■■■□□ 2.1
SMG9-210ENST00000600097 FER1L4A9Z1Z3 1794 aa28.19■■■□□ 2.1
SMG9-210ENST00000600097 AFAP1Q8N556 730 aa28.18■■■□□ 2.1
SMG9-210ENST00000600097 KDM5CP41229 1560 aa28.16■■■□□ 2.1
SMG9-210ENST00000600097 MYT1LQ9UL68 1186 aa28.14■■■□□ 2.1
SMG9-210ENST00000600097 CASKIN1Q8WXD9 1431 aa28.14■■■□□ 2.1
SMG9-210ENST00000600097 CCDC18Q5T9S5 1454 aa28.14■■■□□ 2.09
SMG9-210ENST00000600097 LRRIQ1Q96JM4 1722 aa28.11■■■□□ 2.09
SMG9-210ENST00000600097 MLH3Q9UHC1 1453 aa28.08■■■□□ 2.09
SMG9-210ENST00000600097 CEBPAP49715 358 aaPredicted RBP28.06■■■□□ 2.08
SMG9-210ENST00000600097 REREQ9P2R6 1566 aa28.06■■■□□ 2.08
SMG9-210ENST00000600097 CDC42BPBQ9Y5S2 1711 aa28.06■■■□□ 2.08
SMG9-210ENST00000600097 DIP2CQ9Y2E4 1556 aa28.05■■■□□ 2.08
SMG9-210ENST00000600097 PREX2Q70Z35 1606 aa28.04■■■□□ 2.08
SMG9-210ENST00000600097 ABCC1P33527 1531 aa28.02■■■□□ 2.08
SMG9-210ENST00000600097 TRAPPC8Q9Y2L5 1435 aa28.02■■■□□ 2.08
SMG9-210ENST00000600097 PREX1Q8TCU6 1659 aa28.01■■■□□ 2.07
SMG9-210ENST00000600097 FYCO1Q9BQS8 1478 aa28.01■■■□□ 2.07
SMG9-210ENST00000600097 AGLP35573 1532 aa27.98■■■□□ 2.07
SMG9-210ENST00000600097 CERKQ8TCT0 537 aa27.98■■■□□ 2.07
SMG9-210ENST00000600097 ABCA6Q8N139 1617 aa27.98■■■□□ 2.07
SMG9-210ENST00000600097 ESF1Q9H501 851 aaKnown RBP27.97■■■□□ 2.07
SMG9-210ENST00000600097 UHRF1BP1Q6BDS2 1440 aa27.97■■■□□ 2.07
SMG9-210ENST00000600097 DMRT2Q9Y5R5 561 aa27.96■■■□□ 2.07
SMG9-210ENST00000600097 ITSN2Q9NZM3 1697 aa27.94■■■□□ 2.06
SMG9-210ENST00000600097 SETD1BQ9UPS6 1966 aaKnown RBP27.93■■■□□ 2.06
SMG9-210ENST00000600097 CDC42BPAQ5VT25 1732 aa27.91■■■□□ 2.06
SMG9-210ENST00000600097 ZNF777Q9ULD5 760 aaPredicted RBP27.9■■■□□ 2.06
SMG9-210ENST00000600097 KIDINS220Q9ULH0 1771 aa27.88■■■□□ 2.05
SMG9-210ENST00000600097 CNTLNQ9NXG0 1405 aa27.88■■■□□ 2.05
SMG9-210ENST00000600097 GPATCH8Q9UKJ3 1502 aaKnown RBP27.87■■■□□ 2.05
SMG9-210ENST00000600097 SAMD9LQ8IVG5 1584 aa27.86■■■□□ 2.05
SMG9-210ENST00000600097 SPAG9O60271 1321 aaKnown RBP27.85■■■□□ 2.05
SMG9-210ENST00000600097 C3P01024 1663 aa27.84■■■□□ 2.05
SMG9-210ENST00000600097 SYCP2Q9BX26 1530 aa27.82■■■□□ 2.04
SMG9-210ENST00000600097 STRCQ7RTU9 1775 aa27.82■■■□□ 2.04
SMG9-210ENST00000600097 HNRNPMP52272 730 aaKnown RBP eCLIP27.82■■■□□ 2.04
SMG9-210ENST00000600097 CFDP1Q9UEE9 299 aaPredicted RBP27.82■■■□□ 2.04
SMG9-210ENST00000600097 KIAA1107Q9UPP5 1409 aa27.82■■■□□ 2.04
SMG9-210ENST00000600097 PLEKHH2Q8IVE3 1493 aa27.82■■■□□ 2.04
SMG9-210ENST00000600097 CCNB3Q8WWL7 1395 aa27.8■■■□□ 2.04
SMG9-210ENST00000600097 PTPRTO14522 1441 aa27.78■■■□□ 2.04
SMG9-210ENST00000600097 MTUS2Q5JR59 1369 aa27.78■■■□□ 2.04
SMG9-210ENST00000600097 NPATQ14207 1427 aa27.75■■■□□ 2.03
SMG9-210ENST00000600097 ATP7AQ04656 1500 aa27.74■■■□□ 2.03
SMG9-210ENST00000600097 ZMYM3Q14202 1370 aa27.73■■■□□ 2.03
SMG9-210ENST00000600097 MROH2AA6NES4 1674 aa27.71■■■□□ 2.03
SMG9-210ENST00000600097 A2MP01023 1474 aa27.7■■■□□ 2.02
SMG9-210ENST00000600097 INO80Q9ULG1 1556 aaPredicted RBP27.69■■■□□ 2.02
SMG9-210ENST00000600097 NCOA1Q15788 1441 aa27.68■■■□□ 2.02
SMG9-210ENST00000600097 PLXNC1O60486 1568 aa27.68■■■□□ 2.02
SMG9-210ENST00000600097 SUPT6HQ7KZ85 1726 aaKnown RBP27.67■■■□□ 2.02
SMG9-210ENST00000600097 PPP6R1Q9UPN7 881 aa27.65■■■□□ 2.02
SMG9-210ENST00000600097 EHBP1L1Q8N3D4 1523 aa27.63■■■□□ 2.01
SMG9-210ENST00000600097 GGT6Q6P531 493 aa27.63■■■□□ 2.01
SMG9-210ENST00000600097 ZNF644Q9H582 1327 aaPredicted RBP27.61■■■□□ 2.01
SMG9-210ENST00000600097 TIAM1Q13009 1591 aa27.6■■■□□ 2.01
SMG9-210ENST00000600097 CEP162Q5TB80 1403 aa27.6■■■□□ 2.01
SMG9-210ENST00000600097 CAMSAP1Q5T5Y3 1602 aa27.59■■■□□ 2.01
SMG9-210ENST00000600097 MBD5Q9P267 1494 aa27.59■■■□□ 2.01
SMG9-210ENST00000600097 RTEL1-TNFRSF6BF6WH68 1400 aa27.58■■■□□ 2.01
SMG9-210ENST00000600097 CLTCQ00610 1675 aaKnown RBP27.58■■■□□ 2.01
SMG9-210ENST00000600097 LTBP4Q8N2S1 1624 aa27.57■■■□□ 2
SMG9-210ENST00000600097 PTPRKQ15262 1439 aa27.57■■■□□ 2
SMG9-210ENST00000600097 ADGBQ8N7X0 1667 aa27.56■■■□□ 2
SMG9-210ENST00000600097 IQSEC2Q5JU85 1478 aa27.56■■■□□ 2
SMG9-210ENST00000600097 PLA2R1Q13018 1463 aa27.53■■■□□ 2
SMG9-210ENST00000600097 PKD2Q13563 968 aa27.53■■■□□ 2
SMG9-210ENST00000600097 DHX29Q7Z478 1369 aaKnown RBP27.52■■■□□ 2
SMG9-210ENST00000600097 NCKAP5LQ9HCH0 1330 aa27.52■■■□□ 2
SMG9-210ENST00000600097 MYO3AQ8NEV4 1616 aa27.51■■□□□ 1.99
SMG9-210ENST00000600097 ZNF142P52746 1687 aaPredicted RBP27.5■■□□□ 1.99
SMG9-210ENST00000600097 RSPH4AQ5TD94 716 aa27.5■■□□□ 1.99
SMG9-210ENST00000600097 CEP170BQ9Y4F5 1589 aaPredicted RBP27.49■■□□□ 1.99
SMG9-210ENST00000600097 NCOA2Q15596 1464 aa27.46■■□□□ 1.99
SMG9-210ENST00000600097 CCDC141Q6ZP82 1450 aa27.46■■□□□ 1.99
SMG9-210ENST00000600097 TCOF1Q13428 1488 aaKnown RBP27.45■■□□□ 1.99
SMG9-210ENST00000600097 DISP3Q9P2K9 1392 aa27.45■■□□□ 1.98
SMG9-210ENST00000600097 KIF3BO15066 747 aa27.44■■□□□ 1.98
SMG9-210ENST00000600097 ZNF335Q9H4Z2 1342 aaPredicted RBP27.43■■□□□ 1.98
SMG9-210ENST00000600097 CAMSAP2Q08AD1 1489 aa27.43■■□□□ 1.98
SMG9-210ENST00000600097 A2ML1A8K2U0 1454 aa27.42■■□□□ 1.98
SMG9-210ENST00000600097 FAM135AQ9P2D6 1515 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms