RNA–Protein interactions for RNA: ENST00000599704.5

EMP3-209, Transcript of epithelial membrane protein 3, humanhuman

TSL 3

Gene EMP3, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3-209ENST00000599704 MYO5CQ9NQX4 1742 aa23.31■■□□□ 1.32
EMP3-209ENST00000599704 DENND4BO75064 1496 aaPredicted RBP23.29■■□□□ 1.32
EMP3-209ENST00000599704 LRRC9Q6ZRR7 1453 aa23.28■■□□□ 1.32
EMP3-209ENST00000599704 ARHGEF40Q8TER5 1519 aa23.27■■□□□ 1.32
EMP3-209ENST00000599704 PLCH2O75038 1416 aa23.25■■□□□ 1.31
EMP3-209ENST00000599704 SUPT6HQ7KZ85 1726 aaKnown RBP23.24■■□□□ 1.31
EMP3-209ENST00000599704 ZMYM4Q5VZL5 1548 aa23.22■■□□□ 1.31
EMP3-209ENST00000599704 ADAMTSL3P82987 1691 aa23.19■■□□□ 1.3
EMP3-209ENST00000599704 CCNB3Q8WWL7 1395 aa23.18■■□□□ 1.3
EMP3-209ENST00000599704 KANK4Q5T7N3 995 aaPredicted RBP23.18■■□□□ 1.3
EMP3-209ENST00000599704 BCORL1Q5H9F3 1711 aa23.18■■□□□ 1.3
EMP3-209ENST00000599704 ARHGAP5Q13017 1502 aa23.18■■□□□ 1.3
EMP3-209ENST00000599704 ZFYVE16Q7Z3T8 1539 aa23.18■■□□□ 1.3
EMP3-209ENST00000599704 POGZQ7Z3K3 1410 aa23.17■■□□□ 1.3
EMP3-209ENST00000599704 SCAPERQ9BY12 1400 aa23.17■■□□□ 1.3
EMP3-209ENST00000599704 SIGLEC1Q9BZZ2 1709 aa23.16■■□□□ 1.3
EMP3-209ENST00000599704 CDC42BPBQ9Y5S2 1711 aa23.16■■□□□ 1.3
EMP3-209ENST00000599704 YEATS2Q9ULM3 1422 aa23.16■■□□□ 1.3
EMP3-209ENST00000599704 NCOA2Q15596 1464 aa23.15■■□□□ 1.3
EMP3-209ENST00000599704 PREX2Q70Z35 1606 aa23.15■■□□□ 1.3
EMP3-209ENST00000599704 HECW2Q9P2P5 1572 aa23.14■■□□□ 1.3
EMP3-209ENST00000599704 MADDQ8WXG6 1647 aa23.14■■□□□ 1.29
EMP3-209ENST00000599704 EFCAB2Q5VUJ9 269 aa23.12■■□□□ 1.29
EMP3-209ENST00000599704 ITSN2Q9NZM3 1697 aa23.12■■□□□ 1.29
EMP3-209ENST00000599704 ARID4BQ4LE39 1312 aaPredicted RBP23.11■■□□□ 1.29
EMP3-209ENST00000599704 CDC42BPAQ5VT25 1732 aa23.11■■□□□ 1.29
EMP3-209ENST00000599704 CFDP1Q9UEE9 299 aaPredicted RBP23.08■■□□□ 1.29
EMP3-209ENST00000599704 PTPRMP28827 1452 aa23.08■■□□□ 1.29
EMP3-209ENST00000599704 MAGI2Q86UL8 1455 aa23.08■■□□□ 1.29
EMP3-209ENST00000599704 RIMS1Q86UR5 1692 aaKnown RBP23.07■■□□□ 1.28
EMP3-209ENST00000599704 GPATCH8Q9UKJ3 1502 aaKnown RBP23.07■■□□□ 1.28
EMP3-209ENST00000599704 ABCC1P33527 1531 aa23.05■■□□□ 1.28
EMP3-209ENST00000599704 KDM5CP41229 1560 aa23.05■■□□□ 1.28
EMP3-209ENST00000599704 ZNF518AQ6AHZ1 1483 aa23.05■■□□□ 1.28
EMP3-209ENST00000599704 MYOM3Q5VTT5 1437 aa23.03■■□□□ 1.28
EMP3-209ENST00000599704 ARHGEF12Q9NZN5 1544 aa23.02■■□□□ 1.28
EMP3-209ENST00000599704 MIA2Q96PC5 1412 aa23.01■■□□□ 1.27
EMP3-209ENST00000599704 PLEKHH2Q8IVE3 1493 aa23■■□□□ 1.27
EMP3-209ENST00000599704 PPARGC1BQ86YN6 1023 aaKnown RBP22.99■■□□□ 1.27
EMP3-209ENST00000599704 AFAP1Q8N556 730 aa22.99■■□□□ 1.27
EMP3-209ENST00000599704 ZNF777Q9ULD5 760 aaPredicted RBP22.99■■□□□ 1.27
EMP3-209ENST00000599704 SAMD9LQ8IVG5 1584 aa22.98■■□□□ 1.27
EMP3-209ENST00000599704 DIP2CQ9Y2E4 1556 aa22.98■■□□□ 1.27
EMP3-209ENST00000599704 ABCA6Q8N139 1617 aa22.98■■□□□ 1.27
EMP3-209ENST00000599704 FER1L4A9Z1Z3 1794 aa22.98■■□□□ 1.27
EMP3-209ENST00000599704 C9orf84Q5VXU9 1444 aa22.98■■□□□ 1.27
EMP3-209ENST00000599704 TRAPPC8Q9Y2L5 1435 aa22.98■■□□□ 1.27
EMP3-209ENST00000599704 ATP10AO60312 1499 aa22.98■■□□□ 1.27
EMP3-209ENST00000599704 MLECQ14165 292 aa22.95■■□□□ 1.26
EMP3-209ENST00000599704 SYCP2Q9BX26 1530 aa22.94■■□□□ 1.26
EMP3-209ENST00000599704 FGD6Q6ZV73 1430 aa22.92■■□□□ 1.26
EMP3-209ENST00000599704 MYT1LQ9UL68 1186 aa22.92■■□□□ 1.26
EMP3-209ENST00000599704 KIAA1107Q9UPP5 1409 aa22.91■■□□□ 1.26
EMP3-209ENST00000599704 KIDINS220Q9ULH0 1771 aa22.91■■□□□ 1.26
EMP3-209ENST00000599704 MLH3Q9UHC1 1453 aa22.91■■□□□ 1.26
EMP3-209ENST00000599704 RSPH4AQ5TD94 716 aa22.9■■□□□ 1.26
EMP3-209ENST00000599704 PLPPR3Q6T4P5 718 aa22.9■■□□□ 1.26
EMP3-209ENST00000599704 CAMSAP2Q08AD1 1489 aa22.89■■□□□ 1.25
EMP3-209ENST00000599704 REREQ9P2R6 1566 aa22.88■■□□□ 1.25
EMP3-209ENST00000599704 PTPN23Q9H3S7 1636 aa22.87■■□□□ 1.25
EMP3-209ENST00000599704 LMTK3Q96Q04 1460 aa22.85■■□□□ 1.25
EMP3-209ENST00000599704 TCOF1Q13428 1488 aaKnown RBP22.84■■□□□ 1.25
EMP3-209ENST00000599704 FAM50AQ14320 339 aaKnown RBP22.83■■□□□ 1.25
EMP3-209ENST00000599704 ZNF644Q9H582 1327 aaPredicted RBP22.82■■□□□ 1.24
EMP3-209ENST00000599704 HNRNPMP52272 730 aaKnown RBP eCLIP22.82■■□□□ 1.24
EMP3-209ENST00000599704 INO80Q9ULG1 1556 aaPredicted RBP22.8■■□□□ 1.24
EMP3-209ENST00000599704 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.8■■□□□ 1.242e-6■□□□□ 8.8
EMP3-209ENST00000599704 TSPY4P0CV99 314 aa22.8■■□□□ 1.24
EMP3-209ENST00000599704 TSPY10P0CW01 314 aa22.8■■□□□ 1.24
EMP3-209ENST00000599704 ARHGEF5Q12774 1597 aa22.8■■□□□ 1.24
EMP3-209ENST00000599704 CCDC141Q6ZP82 1450 aa22.79■■□□□ 1.24
EMP3-209ENST00000599704 AGLP35573 1532 aa22.79■■□□□ 1.24
EMP3-209ENST00000599704 ATP7AQ04656 1500 aa22.79■■□□□ 1.24
EMP3-209ENST00000599704 RRBP1Q9P2E9 1410 aaKnown RBP22.78■■□□□ 1.24
EMP3-209ENST00000599704 MBD5Q9P267 1494 aa22.77■■□□□ 1.24
EMP3-209ENST00000599704 SPAG9O60271 1321 aaKnown RBP22.76■■□□□ 1.23
EMP3-209ENST00000599704 CEBPAP49715 358 aaPredicted RBP22.73■■□□□ 1.23
EMP3-209ENST00000599704 C3P01024 1663 aa22.72■■□□□ 1.23
EMP3-209ENST00000599704 PREX1Q8TCU6 1659 aa22.72■■□□□ 1.23
EMP3-209ENST00000599704 DNMT1P26358 1616 aaKnown RBP22.71■■□□□ 1.23
EMP3-209ENST00000599704 HSPA2P54652 639 aa22.71■■□□□ 1.23
EMP3-209ENST00000599704 PLXNC1O60486 1568 aa22.71■■□□□ 1.23
EMP3-209ENST00000599704 RTEL1-TNFRSF6BF6WH68 1400 aa22.7■■□□□ 1.22
EMP3-209ENST00000599704 DAPK1P53355 1430 aa22.7■■□□□ 1.22
EMP3-209ENST00000599704 SHANK2Q9UPX8 1470 aa22.69■■□□□ 1.22
EMP3-209ENST00000599704 ADGBQ8N7X0 1667 aa22.68■■□□□ 1.22
EMP3-209ENST00000599704 A2MP01023 1474 aa22.67■■□□□ 1.22
EMP3-209ENST00000599704 ABCC5O15440 1437 aa22.66■■□□□ 1.22
EMP3-209ENST00000599704 MAST1Q9Y2H9 1570 aa22.66■■□□□ 1.22
EMP3-209ENST00000599704 CROCC2H7BZ55 1655 aa22.65■■□□□ 1.22
EMP3-209ENST00000599704 ANKRD30AQ9BXX3 1397 aa22.63■■□□□ 1.21
EMP3-209ENST00000599704 MROH2AA6NES4 1674 aa22.62■■□□□ 1.21
EMP3-209ENST00000599704 CLTCQ00610 1675 aaKnown RBP22.62■■□□□ 1.21
EMP3-209ENST00000599704 ITGAEP38570 1179 aa22.62■■□□□ 1.21
EMP3-209ENST00000599704 ILDR1Q86SU0 546 aaPredicted RBP22.62■■□□□ 1.21
EMP3-209ENST00000599704 ESF1Q9H501 851 aaKnown RBP22.61■■□□□ 1.21
EMP3-209ENST00000599704 CNTLNQ9NXG0 1405 aa22.59■■□□□ 1.21
EMP3-209ENST00000599704 SETD1BQ9UPS6 1966 aaKnown RBP22.58■■□□□ 1.2
EMP3-209ENST00000599704 UHRF1BP1Q6BDS2 1440 aa22.57■■□□□ 1.2
EMP3-209ENST00000599704 CHIC2Q9UKJ5 165 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms