RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 PTPRMP28827 1452 aa37.26■■■■□ 3.55
CCDC61-207ENST00000599044 ZMYM4Q5VZL5 1548 aa37.26■■■■□ 3.55
CCDC61-207ENST00000599044 MADDQ8WXG6 1647 aa37.25■■■■□ 3.55
CCDC61-207ENST00000599044 MYO5CQ9NQX4 1742 aa37.25■■■■□ 3.55
CCDC61-207ENST00000599044 POGZQ7Z3K3 1410 aa37.22■■■■□ 3.55
CCDC61-207ENST00000599044 CCDC18Q5T9S5 1454 aa37.2■■■■□ 3.54
CCDC61-207ENST00000599044 ZFYVE16Q7Z3T8 1539 aa37.19■■■■□ 3.54
CCDC61-207ENST00000599044 SIGLEC1Q9BZZ2 1709 aa37.16■■■■□ 3.54
CCDC61-207ENST00000599044 ARHGAP5Q13017 1502 aa37.15■■■■□ 3.54
CCDC61-207ENST00000599044 MAGI2Q86UL8 1455 aa37.15■■■■□ 3.54
CCDC61-207ENST00000599044 FYCO1Q9BQS8 1478 aa37.15■■■■□ 3.54
CCDC61-207ENST00000599044 RIMS1Q86UR5 1692 aaKnown RBP37.13■■■■□ 3.53
CCDC61-207ENST00000599044 ILDR1Q86SU0 546 aaPredicted RBP37.13■■■■□ 3.53
CCDC61-207ENST00000599044 AFAP1Q8N556 730 aa37.09■■■■□ 3.53
CCDC61-207ENST00000599044 CDC42BPBQ9Y5S2 1711 aa37.07■■■■□ 3.53
CCDC61-207ENST00000599044 ZNF518AQ6AHZ1 1483 aa37.01■■■■□ 3.52
CCDC61-207ENST00000599044 PREX2Q70Z35 1606 aa37.01■■■■□ 3.52
CCDC61-207ENST00000599044 MLECQ14165 292 aa37.01■■■■□ 3.52
CCDC61-207ENST00000599044 ATP10AO60312 1499 aa37.01■■■■□ 3.51
CCDC61-207ENST00000599044 ARHGEF12Q9NZN5 1544 aa36.99■■■■□ 3.51
CCDC61-207ENST00000599044 KDM5CP41229 1560 aa36.97■■■■□ 3.51
CCDC61-207ENST00000599044 FER1L4A9Z1Z3 1794 aa36.96■■■■□ 3.51
CCDC61-207ENST00000599044 TRAPPC8Q9Y2L5 1435 aa36.94■■■■□ 3.5
CCDC61-207ENST00000599044 LMTK3Q96Q04 1460 aa36.94■■■■□ 3.5
CCDC61-207ENST00000599044 C9orf84Q5VXU9 1444 aa36.93■■■■□ 3.5
CCDC61-207ENST00000599044 CDC42BPAQ5VT25 1732 aa36.93■■■■□ 3.5
CCDC61-207ENST00000599044 ABCC1P33527 1531 aa36.92■■■■□ 3.5
CCDC61-207ENST00000599044 PLPPR3Q6T4P5 718 aa36.92■■■■□ 3.5
CCDC61-207ENST00000599044 CEP162Q5TB80 1403 aa36.92■■■■□ 3.5
CCDC61-207ENST00000599044 MYT1LQ9UL68 1186 aa36.9■■■■□ 3.5
CCDC61-207ENST00000599044 GPATCH8Q9UKJ3 1502 aaKnown RBP36.88■■■■□ 3.49
CCDC61-207ENST00000599044 ZNF777Q9ULD5 760 aaPredicted RBP36.86■■■■□ 3.49
CCDC61-207ENST00000599044 MLH3Q9UHC1 1453 aa36.85■■■■□ 3.49
CCDC61-207ENST00000599044 ITSN2Q9NZM3 1697 aa36.84■■■■□ 3.49
CCDC61-207ENST00000599044 DIP2CQ9Y2E4 1556 aa36.84■■■■□ 3.49
CCDC61-207ENST00000599044 LOC105371045A0A1W2PR82 267 aa36.83■■■■□ 3.49
CCDC61-207ENST00000599044 ABCA6Q8N139 1617 aa36.81■■■■□ 3.48
CCDC61-207ENST00000599044 SAMD9LQ8IVG5 1584 aa36.8■■■■□ 3.48
CCDC61-207ENST00000599044 MTUS2Q5JR59 1369 aa36.79■■■■□ 3.48
CCDC61-207ENST00000599044 HNRNPMP52272 730 aaKnown RBP eCLIP36.76■■■■□ 3.48
CCDC61-207ENST00000599044 CFDP1Q9UEE9 299 aaPredicted RBP36.74■■■■□ 3.47
CCDC61-207ENST00000599044 CCNB3Q8WWL7 1395 aa36.74■■■■□ 3.47
CCDC61-207ENST00000599044 SYCP2Q9BX26 1530 aa36.73■■■■□ 3.47
CCDC61-207ENST00000599044 REREQ9P2R6 1566 aa36.72■■■■□ 3.47
CCDC61-207ENST00000599044 KIDINS220Q9ULH0 1771 aa36.72■■■■□ 3.47
CCDC61-207ENST00000599044 CEBPAP49715 358 aaPredicted RBP36.71■■■■□ 3.47
CCDC61-207ENST00000599044 HSPA2P54652 639 aa36.7■■■■□ 3.47
CCDC61-207ENST00000599044 PREX1Q8TCU6 1659 aa36.66■■■■□ 3.46
CCDC61-207ENST00000599044 EHBP1L1Q8N3D4 1523 aa36.64■■■■□ 3.46
CCDC61-207ENST00000599044 ZNF644Q9H582 1327 aaPredicted RBP36.64■■■■□ 3.46
CCDC61-207ENST00000599044 KIAA1107Q9UPP5 1409 aa36.64■■■■□ 3.46
CCDC61-207ENST00000599044 TIAM1Q13009 1591 aa36.64■■■■□ 3.46
CCDC61-207ENST00000599044 AGLP35573 1532 aa36.63■■■■□ 3.45
CCDC61-207ENST00000599044 SPAG9O60271 1321 aaKnown RBP36.62■■■■□ 3.45
CCDC61-207ENST00000599044 PLEKHH2Q8IVE3 1493 aa36.58■■■■□ 3.45
CCDC61-207ENST00000599044 FBXO41Q8TF61 875 aa36.57■■■■□ 3.44
CCDC61-207ENST00000599044 SETD1BQ9UPS6 1966 aaKnown RBP36.57■■■■□ 3.44
CCDC61-207ENST00000599044 ATP7AQ04656 1500 aa36.52■■■■□ 3.44
CCDC61-207ENST00000599044 MBD5Q9P267 1494 aa36.5■■■■□ 3.43
CCDC61-207ENST00000599044 C3P01024 1663 aa36.5■■■■□ 3.43
CCDC61-207ENST00000599044 VPS8Q8N3P4 1428 aa36.5■■■■□ 3.43
CCDC61-207ENST00000599044 NCOA2Q15596 1464 aa36.5■■■■□ 3.43
CCDC61-207ENST00000599044 INO80Q9ULG1 1556 aaPredicted RBP36.49■■■■□ 3.43
CCDC61-207ENST00000599044 ESF1Q9H501 851 aaKnown RBP36.45■■■■□ 3.43
CCDC61-207ENST00000599044 SUPT6HQ7KZ85 1726 aaKnown RBP36.43■■■■□ 3.42
CCDC61-207ENST00000599044 A2MP01023 1474 aa36.42■■■■□ 3.42
CCDC61-207ENST00000599044 STRCQ7RTU9 1775 aa36.4■■■■□ 3.42
CCDC61-207ENST00000599044 PLXNC1O60486 1568 aa36.4■■■■□ 3.42
CCDC61-207ENST00000599044 LRRC9Q6ZRR7 1453 aa36.37■■■■□ 3.41
CCDC61-207ENST00000599044 KANK4Q5T7N3 995 aaPredicted RBP36.37■■■■□ 3.41
CCDC61-207ENST00000599044 UHRF1BP1Q6BDS2 1440 aa36.35■■■■□ 3.41
CCDC61-207ENST00000599044 CNTLNQ9NXG0 1405 aa36.35■■■■□ 3.41
CCDC61-207ENST00000599044 CAMSAP2Q08AD1 1489 aa36.35■■■■□ 3.41
CCDC61-207ENST00000599044 MROH2AA6NES4 1674 aa36.33■■■■□ 3.41
CCDC61-207ENST00000599044 GGT6Q6P531 493 aa36.31■■■■□ 3.4
CCDC61-207ENST00000599044 RTEL1-TNFRSF6BF6WH68 1400 aa36.31■■■■□ 3.4
CCDC61-207ENST00000599044 ZMYM3Q14202 1370 aa36.29■■■■□ 3.4
CCDC61-207ENST00000599044 ADGBQ8N7X0 1667 aa36.28■■■■□ 3.4
CCDC61-207ENST00000599044 CCDC141Q6ZP82 1450 aa36.27■■■■□ 3.4
CCDC61-207ENST00000599044 MAP3K1Q13233 1512 aa36.24■■■■□ 3.39
CCDC61-207ENST00000599044 CLTCQ00610 1675 aaKnown RBP36.23■■■■□ 3.39
CCDC61-207ENST00000599044 DHX29Q7Z478 1369 aaKnown RBP36.23■■■■□ 3.39
CCDC61-207ENST00000599044 RSPH4AQ5TD94 716 aa36.21■■■■□ 3.39
CCDC61-207ENST00000599044 CERKQ8TCT0 537 aa36.18■■■■□ 3.38
CCDC61-207ENST00000599044 NPATQ14207 1427 aa36.17■■■■□ 3.38
CCDC61-207ENST00000599044 ARHGEF5Q12774 1597 aa36.16■■■■□ 3.38
CCDC61-207ENST00000599044 KIF3BO15066 747 aa36.13■■■■□ 3.37
CCDC61-207ENST00000599044 PTPRKQ15262 1439 aa36.12■■■■□ 3.37
CCDC61-207ENST00000599044 PPP6R1Q9UPN7 881 aa36.12■■■■□ 3.37
CCDC61-207ENST00000599044 DMRT2Q9Y5R5 561 aa36.12■■■■□ 3.37
CCDC61-207ENST00000599044 TSPY4P0CV99 314 aa36.11■■■■□ 3.37
CCDC61-207ENST00000599044 TSPY10P0CW01 314 aa36.11■■■■□ 3.37
CCDC61-207ENST00000599044 MYOM3Q5VTT5 1437 aa36.09■■■■□ 3.37
CCDC61-207ENST00000599044 PTPRTO14522 1441 aa36.08■■■■□ 3.37
CCDC61-207ENST00000599044 ZNF142P52746 1687 aaPredicted RBP36.07■■■■□ 3.36
CCDC61-207ENST00000599044 MIA2Q96PC5 1412 aa36.05■■■■□ 3.36
CCDC61-207ENST00000599044 NCOA1Q15788 1441 aa36.04■■■■□ 3.36
CCDC61-207ENST00000599044 MYO3AQ8NEV4 1616 aa36.04■■■■□ 3.36
CCDC61-207ENST00000599044 CAMSAP1Q5T5Y3 1602 aa36■■■■□ 3.35
CCDC61-207ENST00000599044 APLP2Q06481 763 aa35.99■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms