RNA–Protein interactions for RNA: ENST00000598969.5

COPE-208, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 5

Gene COPE, Length 1,770 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-208ENST00000598969 GLI2P10070 1586 aa31.87■■■□□ 2.69
COPE-208ENST00000598969 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.85■■■□□ 2.695e-7■■□□□ 14.5
COPE-208ENST00000598969 FAM50AQ14320 339 aaKnown RBP31.84■■■□□ 2.69
COPE-208ENST00000598969 ZNF644Q9H582 1327 aaPredicted RBP31.83■■■□□ 2.69
COPE-208ENST00000598969 ARHGAP5Q13017 1502 aa31.82■■■□□ 2.68
COPE-208ENST00000598969 ARAP3Q8WWN8 1544 aa31.82■■■□□ 2.68
COPE-208ENST00000598969 CD109Q6YHK3 1445 aa31.81■■■□□ 2.68
COPE-208ENST00000598969 FAM69CQ0P6D2 419 aa31.8■■■□□ 2.68
COPE-208ENST00000598969 CAMSAP2Q08AD1 1489 aa31.79■■■□□ 2.68
COPE-208ENST00000598969 ZNF777Q9ULD5 760 aaPredicted RBP31.79■■■□□ 2.68
COPE-208ENST00000598969 MAP3K4Q9Y6R4 1608 aa31.78■■■□□ 2.68
COPE-208ENST00000598969 SAMD9LQ8IVG5 1584 aa31.76■■■□□ 2.67
COPE-208ENST00000598969 KIF13AQ9H1H9 1805 aa31.74■■■□□ 2.67
COPE-208ENST00000598969 EFCAB2Q5VUJ9 269 aa31.73■■■□□ 2.67
COPE-208ENST00000598969 FANCAO15360 1455 aa31.7■■■□□ 2.67
COPE-208ENST00000598969 ITGAEP38570 1179 aa31.68■■■□□ 2.66
COPE-208ENST00000598969 MBD5Q9P267 1494 aa31.64■■■□□ 2.66
COPE-208ENST00000598969 DNMT1P26358 1616 aaKnown RBP31.64■■■□□ 2.66
COPE-208ENST00000598969 PTPRKQ15262 1439 aa31.64■■■□□ 2.66
COPE-208ENST00000598969 PLEKHH2Q8IVE3 1493 aa31.64■■■□□ 2.65
COPE-208ENST00000598969 KIAA1107Q9UPP5 1409 aa31.63■■■□□ 2.65
COPE-208ENST00000598969 ABCC1P33527 1531 aa31.63■■■□□ 2.65
COPE-208ENST00000598969 SYCP2Q9BX26 1530 aa31.63■■■□□ 2.65
COPE-208ENST00000598969 ABCC5O15440 1437 aa31.62■■■□□ 2.65
COPE-208ENST00000598969 HNRNPMP52272 730 aaKnown RBP eCLIP31.62■■■□□ 2.65
COPE-208ENST00000598969 ARHGEF12Q9NZN5 1544 aa31.62■■■□□ 2.65
COPE-208ENST00000598969 DAPK1P53355 1430 aa31.61■■■□□ 2.65
COPE-208ENST00000598969 PPRC1Q5VV67 1664 aaKnown RBP31.61■■■□□ 2.65
COPE-208ENST00000598969 AKNAQ7Z591 1439 aa31.6■■■□□ 2.65
COPE-208ENST00000598969 CFAP74Q9C0B2 1584 aa31.6■■■□□ 2.65
COPE-208ENST00000598969 ARHGEF5Q12774 1597 aa31.59■■■□□ 2.65
COPE-208ENST00000598969 NEO1Q92859 1461 aa31.58■■■□□ 2.65
COPE-208ENST00000598969 TSPOAP1O95153 1857 aa31.57■■■□□ 2.64
COPE-208ENST00000598969 ADGRL1O94910 1474 aa31.55■■■□□ 2.64
COPE-208ENST00000598969 CCDC141Q6ZP82 1450 aa31.53■■■□□ 2.64
COPE-208ENST00000598969 CROCC2H7BZ55 1655 aa31.52■■■□□ 2.64
COPE-208ENST00000598969 SCAPERQ9BY12 1400 aa31.52■■■□□ 2.64
COPE-208ENST00000598969 RSPH4AQ5TD94 716 aa31.51■■■□□ 2.64
COPE-208ENST00000598969 TRAPPC8Q9Y2L5 1435 aa31.51■■■□□ 2.64
COPE-208ENST00000598969 TEX14Q8IWB6 1497 aa31.51■■■□□ 2.63
COPE-208ENST00000598969 TRHP20396 242 aaPredicted RBP31.49■■■□□ 2.63
COPE-208ENST00000598969 CHIC2Q9UKJ5 165 aa31.48■■■□□ 2.63
COPE-208ENST00000598969 SHANK2Q9UPX8 1470 aa31.47■■■□□ 2.63
COPE-208ENST00000598969 C9orf84Q5VXU9 1444 aa31.43■■■□□ 2.62
COPE-208ENST00000598969 TSPY4P0CV99 314 aa31.43■■■□□ 2.62
COPE-208ENST00000598969 TSPY10P0CW01 314 aa31.43■■■□□ 2.62
COPE-208ENST00000598969 AFAP1Q8N556 730 aa31.43■■■□□ 2.62
COPE-208ENST00000598969 ROCK1Q13464 1354 aa31.41■■■□□ 2.62
COPE-208ENST00000598969 ADGRL2O95490 1459 aa31.41■■■□□ 2.62
COPE-208ENST00000598969 MAST1Q9Y2H9 1570 aa31.4■■■□□ 2.62
COPE-208ENST00000598969 POGZQ7Z3K3 1410 aa31.4■■■□□ 2.62
COPE-208ENST00000598969 DENND4BO75064 1496 aaPredicted RBP31.38■■■□□ 2.61
COPE-208ENST00000598969 ADGBQ8N7X0 1667 aa31.38■■■□□ 2.61
COPE-208ENST00000598969 HFM1A2PYH4 1435 aa31.37■■■□□ 2.61
COPE-208ENST00000598969 ZNF518AQ6AHZ1 1483 aa31.37■■■□□ 2.61
COPE-208ENST00000598969 NCOA1Q15788 1441 aa31.36■■■□□ 2.61
COPE-208ENST00000598969 RRP7BPQ9NSQ0 103 aa31.36■■■□□ 2.61
COPE-208ENST00000598969 NAIPQ13075 1403 aa31.35■■■□□ 2.61
COPE-208ENST00000598969 ANKRD30AQ9BXX3 1397 aa31.33■■■□□ 2.61
COPE-208ENST00000598969 KDM5CP41229 1560 aa31.33■■■□□ 2.61
COPE-208ENST00000598969 RAPGEF3O95398 923 aa31.33■■■□□ 2.61
COPE-208ENST00000598969 SPAG9O60271 1321 aaKnown RBP31.33■■■□□ 2.61
COPE-208ENST00000598969 SETD5Q9C0A6 1442 aa31.33■■■□□ 2.61
COPE-208ENST00000598969 RICTORQ6R327 1708 aa31.32■■■□□ 2.6
COPE-208ENST00000598969 RTEL1-TNFRSF6BF6WH68 1400 aa31.31■■■□□ 2.6
COPE-208ENST00000598969 ZFYVE16Q7Z3T8 1539 aa31.3■■■□□ 2.6
COPE-208ENST00000598969 FRMPD1Q5SYB0 1578 aa31.3■■■□□ 2.6
COPE-208ENST00000598969 INO80Q9ULG1 1556 aaPredicted RBP31.3■■■□□ 2.6
COPE-208ENST00000598969 GCC2Q8IWJ2 1684 aa31.29■■■□□ 2.6
COPE-208ENST00000598969 COL17A1Q9UMD9 1497 aaPredicted RBP31.29■■■□□ 2.6
COPE-208ENST00000598969 PLXNC1O60486 1568 aa31.27■■■□□ 2.6
COPE-208ENST00000598969 RAB3GAP2Q9H2M9 1393 aa31.27■■■□□ 2.6
COPE-208ENST00000598969 ATP7AQ04656 1500 aa31.26■■■□□ 2.6
COPE-208ENST00000598969 KIF15Q9NS87 1388 aa31.24■■■□□ 2.59
COPE-208ENST00000598969 MLH3Q9UHC1 1453 aa31.24■■■□□ 2.59
COPE-208ENST00000598969 KIDINS220Q9ULH0 1771 aa31.23■■■□□ 2.59
COPE-208ENST00000598969 HECW2Q9P2P5 1572 aa31.21■■■□□ 2.59
COPE-208ENST00000598969 KDM6BO15054 1643 aa31.21■■■□□ 2.59
COPE-208ENST00000598969 ZMYM4Q5VZL5 1548 aa31.19■■■□□ 2.58
COPE-208ENST00000598969 HRCP23327 699 aa31.16■■■□□ 2.58
COPE-208ENST00000598969 MYT1LQ9UL68 1186 aa31.16■■■□□ 2.58
COPE-208ENST00000598969 ANKRD50Q9ULJ7 1429 aa31.16■■■□□ 2.58
COPE-208ENST00000598969 DUOX2Q9NRD8 1548 aa31.14■■■□□ 2.58
COPE-208ENST00000598969 ABCA6Q8N139 1617 aa31.11■■■□□ 2.57
COPE-208ENST00000598969 MAGI2Q86UL8 1455 aa31.1■■■□□ 2.57
COPE-208ENST00000598969 YEATS2Q9ULM3 1422 aa31.09■■■□□ 2.57
COPE-208ENST00000598969 DIP2CQ9Y2E4 1556 aa31.08■■■□□ 2.57
COPE-208ENST00000598969 ERBINQ96RT1 1412 aa31.07■■■□□ 2.56
COPE-208ENST00000598969 DHX29Q7Z478 1369 aaKnown RBP31.05■■■□□ 2.56
COPE-208ENST00000598969 A2MP01023 1474 aa31.03■■■□□ 2.56
COPE-208ENST00000598969 ARHGEF40Q8TER5 1519 aa30.97■■■□□ 2.55
COPE-208ENST00000598969 DHX57Q6P158 1386 aaKnown RBP30.97■■■□□ 2.55
COPE-208ENST00000598969 ATP10AO60312 1499 aa30.96■■■□□ 2.55
COPE-208ENST00000598969 TRIM52Q96A61 297 aa30.95■■■□□ 2.55
COPE-208ENST00000598969 EIF2AK4Q9P2K8 1649 aaKnown RBP30.95■■■□□ 2.54
COPE-208ENST00000598969 ACIN1Q9UKV3 1341 aaKnown RBP30.95■■■□□ 2.54
COPE-208ENST00000598969 UNC13BO14795 1591 aa30.92■■■□□ 2.54
COPE-208ENST00000598969 REREQ9P2R6 1566 aa30.91■■■□□ 2.54
COPE-208ENST00000598969 CCER1Q8TC90 406 aaPredicted RBP30.9■■■□□ 2.54
COPE-208ENST00000598969 KIF3BO15066 747 aa30.89■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms