RNA–Protein interactions for RNA: ENST00000598329.2

SYMPK-210, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 1,000 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-210ENST00000598329 EHBP1L1Q8N3D4 1523 aa19.9■□□□□ 0.78
SYMPK-210ENST00000598329 TIAM1Q13009 1591 aa19.88■□□□□ 0.77
SYMPK-210ENST00000598329 RICTORQ6R327 1708 aa19.88■□□□□ 0.77
SYMPK-210ENST00000598329 CDC42BPBQ9Y5S2 1711 aa19.88■□□□□ 0.77
SYMPK-210ENST00000598329 PREX2Q70Z35 1606 aa19.87■□□□□ 0.77
SYMPK-210ENST00000598329 ARHGAP5Q13017 1502 aa19.87■□□□□ 0.77
SYMPK-210ENST00000598329 POGZQ7Z3K3 1410 aa19.87■□□□□ 0.77
SYMPK-210ENST00000598329 ZMYM4Q5VZL5 1548 aa19.86■□□□□ 0.77
SYMPK-210ENST00000598329 MAGI2Q86UL8 1455 aa19.86■□□□□ 0.77
SYMPK-210ENST00000598329 LRRC9Q6ZRR7 1453 aa19.85■□□□□ 0.77
SYMPK-210ENST00000598329 KDM4FA0A1W2PPD8 638 aa19.84■□□□□ 0.77
SYMPK-210ENST00000598329 CCNB3Q8WWL7 1395 aa19.83■□□□□ 0.77
SYMPK-210ENST00000598329 CDC42BPAQ5VT25 1732 aa19.83■□□□□ 0.77
SYMPK-210ENST00000598329 ZNF518AQ6AHZ1 1483 aa19.81■□□□□ 0.76
SYMPK-210ENST00000598329 KIAA1107Q9UPP5 1409 aa19.81■□□□□ 0.76
SYMPK-210ENST00000598329 ARHGEF12Q9NZN5 1544 aa19.81■□□□□ 0.76
SYMPK-210ENST00000598329 KANK4Q5T7N3 995 aaPredicted RBP19.8■□□□□ 0.76
SYMPK-210ENST00000598329 CFDP1Q9UEE9 299 aaPredicted RBP19.8■□□□□ 0.76
SYMPK-210ENST00000598329 ABCC1P33527 1531 aa19.8■□□□□ 0.76
SYMPK-210ENST00000598329 NCOA2Q15596 1464 aa19.79■□□□□ 0.76
SYMPK-210ENST00000598329 KDM5CP41229 1560 aa19.79■□□□□ 0.76
SYMPK-210ENST00000598329 AFAP1Q8N556 730 aa19.78■□□□□ 0.76
SYMPK-210ENST00000598329 PLEKHH2Q8IVE3 1493 aa19.77■□□□□ 0.76
SYMPK-210ENST00000598329 TRAPPC8Q9Y2L5 1435 aa19.76■□□□□ 0.75
SYMPK-210ENST00000598329 ARHGEF40Q8TER5 1519 aa19.76■□□□□ 0.75
SYMPK-210ENST00000598329 MLH3Q9UHC1 1453 aa19.76■□□□□ 0.75
SYMPK-210ENST00000598329 SUPT6HQ7KZ85 1726 aaKnown RBP19.76■□□□□ 0.75
SYMPK-210ENST00000598329 SAMD9LQ8IVG5 1584 aa19.75■□□□□ 0.75
SYMPK-210ENST00000598329 YEATS2Q9ULM3 1422 aa19.75■□□□□ 0.75
SYMPK-210ENST00000598329 ZFYVE16Q7Z3T8 1539 aa19.73■□□□□ 0.75
SYMPK-210ENST00000598329 AEBP2Q6ZN18 517 aaPredicted RBP19.71■□□□□ 0.75
SYMPK-210ENST00000598329 ATP10AO60312 1499 aa19.71■□□□□ 0.75
SYMPK-210ENST00000598329 MBD5Q9P267 1494 aa19.71■□□□□ 0.75
SYMPK-210ENST00000598329 ITSN2Q9NZM3 1697 aa19.71■□□□□ 0.75
SYMPK-210ENST00000598329 APLP2Q06481 763 aa19.7■□□□□ 0.74
SYMPK-210ENST00000598329 ZNF777Q9ULD5 760 aaPredicted RBP19.7■□□□□ 0.74
SYMPK-210ENST00000598329 HNRNPMP52272 730 aaKnown RBP eCLIP19.69■□□□□ 0.74
SYMPK-210ENST00000598329 ZNF644Q9H582 1327 aaPredicted RBP19.69■□□□□ 0.74
SYMPK-210ENST00000598329 SYCP2Q9BX26 1530 aa19.68■□□□□ 0.74
SYMPK-210ENST00000598329 MIA2Q96PC5 1412 aa19.68■□□□□ 0.74
SYMPK-210ENST00000598329 RSPH4AQ5TD94 716 aa19.67■□□□□ 0.74
SYMPK-210ENST00000598329 HECW2Q9P2P5 1572 aa19.66■□□□□ 0.74
SYMPK-210ENST00000598329 REREQ9P2R6 1566 aa19.66■□□□□ 0.74
SYMPK-210ENST00000598329 MYOM3Q5VTT5 1437 aa19.65■□□□□ 0.74
SYMPK-210ENST00000598329 C9orf84Q5VXU9 1444 aa19.65■□□□□ 0.74
SYMPK-210ENST00000598329 SPAG9O60271 1321 aaKnown RBP19.63■□□□□ 0.73
SYMPK-210ENST00000598329 ADAMTSL3P82987 1691 aa19.62■□□□□ 0.73
SYMPK-210ENST00000598329 DIP2CQ9Y2E4 1556 aa19.62■□□□□ 0.73
SYMPK-210ENST00000598329 CAMSAP2Q08AD1 1489 aa19.62■□□□□ 0.73
SYMPK-210ENST00000598329 RTEL1-TNFRSF6BF6WH68 1400 aa19.62■□□□□ 0.73
SYMPK-210ENST00000598329 KIDINS220Q9ULH0 1771 aa19.62■□□□□ 0.73
SYMPK-210ENST00000598329 BCORL1Q5H9F3 1711 aa19.6■□□□□ 0.73
SYMPK-210ENST00000598329 SIGLEC1Q9BZZ2 1709 aa19.6■□□□□ 0.73
SYMPK-210ENST00000598329 AGLP35573 1532 aa19.6■□□□□ 0.73
SYMPK-210ENST00000598329 ARID4BQ4LE39 1312 aaPredicted RBP19.59■□□□□ 0.73
SYMPK-210ENST00000598329 ABCA6Q8N139 1617 aa19.58■□□□□ 0.73
SYMPK-210ENST00000598329 ARHGEF5Q12774 1597 aa19.58■□□□□ 0.73
SYMPK-210ENST00000598329 INO80Q9ULG1 1556 aaPredicted RBP19.58■□□□□ 0.73
SYMPK-210ENST00000598329 CCDC141Q6ZP82 1450 aa19.57■□□□□ 0.72
SYMPK-210ENST00000598329 ATP7AQ04656 1500 aa19.56■□□□□ 0.72
SYMPK-210ENST00000598329 TCOF1Q13428 1488 aaKnown RBP19.54■□□□□ 0.72
SYMPK-210ENST00000598329 FGD6Q6ZV73 1430 aa19.53■□□□□ 0.72
SYMPK-210ENST00000598329 MYT1LQ9UL68 1186 aa19.53■□□□□ 0.72
SYMPK-210ENST00000598329 PTPRMP28827 1452 aa19.52■□□□□ 0.72
SYMPK-210ENST00000598329 PLXNC1O60486 1568 aa19.51■□□□□ 0.71
SYMPK-210ENST00000598329 A2MP01023 1474 aa19.5■□□□□ 0.71
SYMPK-210ENST00000598329 TSPY4P0CV99 314 aa19.5■□□□□ 0.71
SYMPK-210ENST00000598329 TSPY10P0CW01 314 aa19.5■□□□□ 0.71
SYMPK-210ENST00000598329 DHX29Q7Z478 1369 aaKnown RBP19.49■□□□□ 0.71
SYMPK-210ENST00000598329 MADDQ8WXG6 1647 aa19.49■□□□□ 0.71
SYMPK-210ENST00000598329 MAST1Q9Y2H9 1570 aa19.49■□□□□ 0.71
SYMPK-210ENST00000598329 PTPN23Q9H3S7 1636 aa19.46■□□□□ 0.71
SYMPK-210ENST00000598329 ABCC5O15440 1437 aa19.45■□□□□ 0.7
SYMPK-210ENST00000598329 PPP6R1Q9UPN7 881 aa19.45■□□□□ 0.7
SYMPK-210ENST00000598329 ADGBQ8N7X0 1667 aa19.44■□□□□ 0.7
SYMPK-210ENST00000598329 SHANK2Q9UPX8 1470 aa19.44■□□□□ 0.7
SYMPK-210ENST00000598329 MLECQ14165 292 aa19.44■□□□□ 0.7
SYMPK-210ENST00000598329 DAPK1P53355 1430 aa19.41■□□□□ 0.7
SYMPK-210ENST00000598329 CNTLNQ9NXG0 1405 aa19.4■□□□□ 0.7
SYMPK-210ENST00000598329 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.39■□□□□ 0.693e-6■■■■□ 26.4
SYMPK-210ENST00000598329 DNMT1P26358 1616 aaKnown RBP19.39■□□□□ 0.69
SYMPK-210ENST00000598329 RIMS1Q86UR5 1692 aaKnown RBP19.39■□□□□ 0.69
SYMPK-210ENST00000598329 FER1L4A9Z1Z3 1794 aa19.38■□□□□ 0.69
SYMPK-210ENST00000598329 NCOA1Q15788 1441 aa19.34■□□□□ 0.69
SYMPK-210ENST00000598329 CROCC2H7BZ55 1655 aa19.33■□□□□ 0.69
SYMPK-210ENST00000598329 KIF3BO15066 747 aa19.33■□□□□ 0.68
SYMPK-210ENST00000598329 FAM135AQ9P2D6 1515 aa19.33■□□□□ 0.68
SYMPK-210ENST00000598329 ADGRL2O95490 1459 aa19.33■□□□□ 0.68
SYMPK-210ENST00000598329 DUOX2Q9NRD8 1548 aa19.32■□□□□ 0.68
SYMPK-210ENST00000598329 GGT6Q6P531 493 aa19.32■□□□□ 0.68
SYMPK-210ENST00000598329 KIF15Q9NS87 1388 aa19.32■□□□□ 0.68
SYMPK-210ENST00000598329 ZMYM3Q14202 1370 aa19.31■□□□□ 0.68
SYMPK-210ENST00000598329 ANKRD30AQ9BXX3 1397 aa19.31■□□□□ 0.68
SYMPK-210ENST00000598329 CEBPAP49715 358 aaPredicted RBP19.3■□□□□ 0.68
SYMPK-210ENST00000598329 FAM50AQ14320 339 aaKnown RBP19.3■□□□□ 0.68
SYMPK-210ENST00000598329 ESF1Q9H501 851 aaKnown RBP19.3■□□□□ 0.68
SYMPK-210ENST00000598329 MROH2AA6NES4 1674 aa19.3■□□□□ 0.68
SYMPK-210ENST00000598329 ERBINQ96RT1 1412 aa19.29■□□□□ 0.68
SYMPK-210ENST00000598329 RRBP1Q9P2E9 1410 aaKnown RBP19.29■□□□□ 0.68
SYMPK-210ENST00000598329 EIF2AK4Q9P2K8 1649 aaKnown RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 434.6 ms